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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
10351 O_BomoASG19317_3prime_partial:A_BomoASG_c30522_g2_i1
102bp
 PREDICTED:_RNA-directed_DNA_polymerase_from_mobile_element_jockey-like_isoform_X1_[Papilio_xuthus]
10352 O_BomoASG19318_3prime_partial:A_BomoASG_c30523_g1_i1
124bp
 cytochrome_c_oxidase_assembly_protein_COX15_homolog_isoform_X3_[Bombyx_mori]
10353 O_BomoASG19319_3prime_partial:A_BomoASG_c30523_g1_i2
386bp
 cytochrome_c_oxidase_assembly_protein_COX15_homolog_isoform_X1_[Bombyx_mori]
GO:0004129 F cytochrome-c oxidase activity
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0006784 P heme A biosynthetic process
GO:0008535 P respiratory chain complex IV assembly
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016627 F oxidoreductase activity, acting on the CH-CH group of donors
GO:0016653 F oxidoreductase activity, acting on NAD(P)H, heme protein as acceptor
GO:0031966 C mitochondrial membrane
GO:0055114 P obsolete oxidation-reduction process
GO:0070069 C cytochrome complex
GO:1902600 P proton transmembrane transport
10354 O_BomoASG1931_complete:A_BomoASG_c12265_g1_i1
134bp
10355 O_BomoASG19320_complete:A_BomoASG_c30523_g1_i2
165bp
10356 O_BomoASG19321_complete:A_BomoASG_c30524_g1_i1
450bp
 tetratricopeptide_repeat_protein_5_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0003682 F chromatin binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0006281 P DNA repair
GO:0006974 P cellular response to DNA damage stimulus
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:1901796 P regulation of signal transduction by p53 class mediator
10357 O_BomoASG19322_complete:A_BomoASG_c30524_g1_i1
119bp
10358 O_BomoASG19323_5prime_partial:A_BomoASG_c30524_g1_i2
124bp
10359 O_BomoASG19324_5prime_partial:A_BomoASG_c30524_g1_i3
343bp
 tetratricopeptide_repeat_protein_5_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0003682 F chromatin binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0006281 P DNA repair
GO:0006974 P cellular response to DNA damage stimulus
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:1901796 P regulation of signal transduction by p53 class mediator
10360 O_BomoASG19325_complete:A_BomoASG_c30524_g1_i3
119bp
10361 O_BomoASG19326_internal:A_BomoASG_c30525_g1_i1
587bp
 uncharacterized_protein_LOC110373622_[Helicoverpa_armigera]
10362 O_BomoASG19327_complete:A_BomoASG_c30525_g1_i1
104bp
10363 O_BomoASG19328_3prime_partial:A_BomoASG_c30526_g1_i1
402bp
 general_transcription_factor_IIH_subunit_2_[Bombyx_mori]
GO:0000439 C transcription factor TFIIH core complex
GO:0003674 F molecular_function
GO:0004672 F protein kinase activity
GO:0005575 C cellular_component
GO:0005634 C nucleus
GO:0005675 C transcription factor TFIIH holo complex
GO:0006281 P DNA repair
GO:0006289 P nucleotide-excision repair
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006366 P transcription by RNA polymerase II
GO:0006468 P protein phosphorylation
GO:0006974 P cellular response to DNA damage stimulus
GO:0008094 F ATP-dependent activity, acting on DNA
GO:0008150 P biological_process
GO:0008270 F zinc ion binding
GO:0008353 F RNA polymerase II CTD heptapeptide repeat kinase activity
GO:0046872 F metal ion binding
10364 O_BomoASG19329_internal:A_BomoASG_c30526_g1_i2
319bp
 general_transcription_factor_IIH_subunit_2_[Bombyx_mori]
GO:0000439 C transcription factor TFIIH core complex
GO:0003674 F molecular_function
GO:0004672 F protein kinase activity
GO:0005575 C cellular_component
GO:0005634 C nucleus
GO:0005675 C transcription factor TFIIH holo complex
GO:0006281 P DNA repair
GO:0006289 P nucleotide-excision repair
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006366 P transcription by RNA polymerase II
GO:0006468 P protein phosphorylation
GO:0006974 P cellular response to DNA damage stimulus
GO:0008094 F ATP-dependent activity, acting on DNA
GO:0008150 P biological_process
GO:0008270 F zinc ion binding
GO:0008353 F RNA polymerase II CTD heptapeptide repeat kinase activity
GO:0046872 F metal ion binding
10365 O_BomoASG1932_complete:A_BomoASG_c12267_g1_i1
965bp
 kinesin_heavy_chain_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0001754 P eye photoreceptor cell differentiation
GO:0003774 F cytoskeletal motor activity
GO:0003777 F microtubule motor activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0005871 C kinesin complex
GO:0005874 C microtubule
GO:0005875 C microtubule associated complex
GO:0006886 P intracellular protein transport
GO:0007018 P microtubule-based movement
GO:0007269 P neurotransmitter secretion
GO:0007303 P cytoplasmic transport, nurse cell to oocyte
GO:0007310 P oocyte dorsal/ventral axis specification
GO:0007315 P pole plasm assembly
GO:0007317 P regulation of pole plasm oskar mRNA localization
GO:0007409 P axonogenesis
GO:0007411 P axon guidance
GO:0008017 F microtubule binding
GO:0008088 P axo-dendritic transport
GO:0008103 P oocyte microtubule cytoskeleton polarization
GO:0008152 P metabolic process
GO:0008345 P larval locomotory behavior
GO:0008574 F plus-end-directed microtubule motor activity
GO:0010970 P transport along microtubule
GO:0016482 P cytosolic transport
GO:0019227 P neuronal action potential propagation
GO:0030011 P maintenance of cell polarity
GO:0030478 C actin cap
GO:0035371 C microtubule plus-end
GO:0035617 P stress granule disassembly
GO:0040023 P nuclear migration
GO:0043005 C neuron projection
GO:0045451 P pole plasm oskar mRNA localization
GO:0046785 P microtubule polymerization
GO:0046843 P dorsal appendage formation
GO:0047497 P mitochondrion transport along microtubule
GO:0048311 P mitochondrion distribution
GO:0048312 P intracellular distribution of mitochondria
GO:0048741 P skeletal muscle fiber development
GO:0048812 P neuron projection morphogenesis
GO:0048813 P dendrite morphogenesis
GO:0051012 P microtubule sliding
GO:0051299 P centrosome separation
GO:0061572 P actin filament bundle organization
GO:0098793 C presynapse
10366 O_BomoASG19330_5prime_partial:A_BomoASG_c30528_g1_i1
198bp
 serine/threonine-protein_kinase_ULK1_isoform_X3_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0006468 P protein phosphorylation
GO:0006914 P autophagy
GO:0007275 P multicellular organism development
GO:0007399 P nervous system development
GO:0007409 P axonogenesis
GO:0007411 P axon guidance
GO:0008340 P determination of adult lifespan
GO:0008361 P regulation of cell size
GO:0009792 P embryo development ending in birth or egg hatching
GO:0012501 P programmed cell death
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016477 P cell migration
GO:0016740 F transferase activity
GO:0030154 P cell differentiation
GO:0030424 C axon
GO:0030516 P regulation of axon extension
GO:0032880 P regulation of protein localization
GO:0040014 P regulation of multicellular organism growth
GO:0040024 P dauer larval development
GO:0043005 C neuron projection
GO:0043025 C neuronal cell body
GO:0043277 P apoptotic cell clearance
GO:0045138 P nematode male tail tip morphogenesis
GO:0046777 P protein autophosphorylation
10367 O_BomoASG19331_complete:A_BomoASG_c30529_g2_i1
166bp
 uncharacterized_protein_LOC110381307_isoform_X2_[Helicoverpa_armigera]
10368 O_BomoASG19332_internal:A_BomoASG_c30531_g1_i1
234bp
 myocyte_enhancing_factor_2_isoform_A_[Bombyx_mori]
GO:0001077 F DNA-binding transcription activator activity, RNA polymerase II-specific
GO:0001158 F cis-regulatory region sequence-specific DNA binding
GO:0001205 F DNA-binding transcription activator activity, RNA polymerase II-specific
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006366 P transcription by RNA polymerase II
GO:0007275 P multicellular organism development
GO:0007496 P anterior midgut development
GO:0007498 P mesoderm development
GO:0007507 P heart development
GO:0007517 P muscle organ development
GO:0007519 P skeletal muscle tissue development
GO:0007520 P myoblast fusion
GO:0010468 P regulation of gene expression
GO:0016202 P regulation of striated muscle tissue development
GO:0019730 P antimicrobial humoral response
GO:0019915 P lipid storage
GO:0030154 P cell differentiation
GO:0030707 P ovarian follicle cell development
GO:0032968 P positive regulation of transcription elongation from RNA polymerase II promoter
GO:0045475 P locomotor rhythm
GO:0046983 F protein dimerization activity
GO:0048747 P muscle cell development
GO:0052576 P carbohydrate storage
10369 O_BomoASG19333_internal:A_BomoASG_c30531_g1_i2
230bp
 myocyte_enhancing_factor_2_isoform_B_[Bombyx_mori]
GO:0001077 F DNA-binding transcription activator activity, RNA polymerase II-specific
GO:0001158 F cis-regulatory region sequence-specific DNA binding
GO:0001205 F DNA-binding transcription activator activity, RNA polymerase II-specific
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006366 P transcription by RNA polymerase II
GO:0007275 P multicellular organism development
GO:0007496 P anterior midgut development
GO:0007498 P mesoderm development
GO:0007507 P heart development
GO:0007517 P muscle organ development
GO:0007519 P skeletal muscle tissue development
GO:0007520 P myoblast fusion
GO:0010468 P regulation of gene expression
GO:0016202 P regulation of striated muscle tissue development
GO:0019730 P antimicrobial humoral response
GO:0019915 P lipid storage
GO:0030154 P cell differentiation
GO:0030707 P ovarian follicle cell development
GO:0032968 P positive regulation of transcription elongation from RNA polymerase II promoter
GO:0045475 P locomotor rhythm
GO:0046983 F protein dimerization activity
GO:0048747 P muscle cell development
GO:0052576 P carbohydrate storage
10370 O_BomoASG19334_5prime_partial:A_BomoASG_c30532_g2_i1
182bp
 uncharacterized_protein_LOC101746312_isoform_X1_[Bombyx_mori]
10371 O_BomoASG19335_complete:A_BomoASG_c30532_g2_i2
427bp
 uncharacterized_protein_LOC101746312_isoform_X1_[Bombyx_mori]
GO:0002028 P regulation of sodium ion transport
GO:0005515 F protein binding
GO:0005575 C cellular_component
GO:0005886 C plasma membrane
GO:0016020 C membrane
GO:0016021 C integral component of membrane
10372 O_BomoASG19336_5prime_partial:A_BomoASG_c30533_g2_i1
124bp
 single-stranded_DNA-binding_protein,_partial_[Bombyx_mori]
10373 O_BomoASG19337_complete:A_BomoASG_c30533_g3_i1
209bp
 ras-related_protein_Rab-18_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0001654 P eye development
GO:0003924 F GTPase activity
GO:0005525 F GTP binding
GO:0005622 C intracellular anatomical structure
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0006886 P intracellular protein transport
GO:0006913 P nucleocytoplasmic transport
GO:0007165 P signal transduction
GO:0007264 P small GTPase mediated signal transduction
GO:0007275 P multicellular organism development
GO:0007420 P brain development
GO:0008152 P metabolic process
GO:0009925 C basal plasma membrane
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016324 C apical plasma membrane
GO:0019003 F GDP binding
GO:0034389 P lipid droplet organization
GO:0070062 C extracellular exosome
GO:0071782 C endoplasmic reticulum tubular network
GO:0071786 P endoplasmic reticulum tubular network organization
10374 O_BomoASG19338_5prime_partial:A_BomoASG_c30533_g3_i2
223bp
 ras-related_protein_Rab-18_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0001654 P eye development
GO:0003924 F GTPase activity
GO:0005525 F GTP binding
GO:0005622 C intracellular anatomical structure
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0006886 P intracellular protein transport
GO:0006913 P nucleocytoplasmic transport
GO:0007165 P signal transduction
GO:0007264 P small GTPase mediated signal transduction
GO:0007275 P multicellular organism development
GO:0007420 P brain development
GO:0008152 P metabolic process
GO:0009925 C basal plasma membrane
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016324 C apical plasma membrane
GO:0019003 F GDP binding
GO:0034389 P lipid droplet organization
GO:0070062 C extracellular exosome
GO:0071782 C endoplasmic reticulum tubular network
GO:0071786 P endoplasmic reticulum tubular network organization
10375 O_BomoASG19339_complete:A_BomoASG_c30533_g6_i2
100bp
10376 O_BomoASG1933_complete:A_BomoASG_c12267_g1_i1
153bp
10377 O_BomoASG19340_complete:A_BomoASG_c30534_g1_i1
1727bp
 LOW_QUALITY_PROTEIN:_protein_polybromo-1_[Bombyx_mori]
GO:0000228 C nuclear chromosome
GO:0003677 F DNA binding
GO:0003682 F chromatin binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0006338 P chromatin remodeling
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007067 P mitotic cell cycle
GO:0008285 P negative regulation of cell population proliferation
GO:0016568 P chromatin organization
GO:0090544 C SWI/SNF superfamily-type complex
10378 O_BomoASG19341_complete:A_BomoASG_c30534_g1_i1
211bp
10379 O_BomoASG19342_complete:A_BomoASG_c30534_g1_i1
203bp
10380 O_BomoASG19343_complete:A_BomoASG_c30534_g1_i1
130bp
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