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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
10321 O_BomoASG19290_5prime_partial:A_BomoASG_c30515_g5_i1
365bp
 mitogen-activated_protein_kinase_kinase_kinase_4_[Bombyx_mori]
GO:0000165 P MAPK cascade
GO:0000166 F nucleotide binding
GO:0000186 P obsolete activation of MAPKK activity
GO:0001890 P placenta development
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0004709 F MAP kinase kinase kinase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0006468 P protein phosphorylation
GO:0010225 P response to UV-C
GO:0010468 P regulation of gene expression
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0019100 P male germ-line sex determination
GO:0032212 P positive regulation of telomere maintenance via telomerase
GO:0035556 P intracellular signal transduction
GO:0043507 P positive regulation of JUN kinase activity
GO:0046872 F metal ion binding
GO:0048471 C perinuclear region of cytoplasm
GO:0051973 P positive regulation of telomerase activity
GO:0060718 P chorionic trophoblast cell differentiation
GO:1900745 P positive regulation of p38MAPK cascade
GO:1904355 P positive regulation of telomere capping
10322 O_BomoASG19291_5prime_partial:A_BomoASG_c30515_g5_i1
352bp
10323 O_BomoASG19292_complete:A_BomoASG_c30515_g5_i1
112bp
10324 O_BomoASG19293_complete:A_BomoASG_c30516_g1_i2
601bp
 E3_SUMO-protein_ligase_PIAS3_isoform_X4_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008022 F protein C-terminus binding
GO:0008270 F zinc ion binding
GO:0009725 P response to hormone
GO:0010628 P positive regulation of gene expression
GO:0015459 F potassium channel regulator activity
GO:0016607 C nuclear speck
GO:0016874 F ligase activity
GO:0016925 P protein sumoylation
GO:0019789 F SUMO transferase activity
GO:0019899 F enzyme binding
GO:0030425 C dendrite
GO:0033234 P negative regulation of protein sumoylation
GO:0033235 P positive regulation of protein sumoylation
GO:0045202 C synapse
GO:0045838 P positive regulation of membrane potential
GO:0046872 F metal ion binding
GO:0047485 F protein N-terminus binding
10325 O_BomoASG19294_complete:A_BomoASG_c30516_g1_i2
113bp
10326 O_BomoASG19295_complete:A_BomoASG_c30516_g1_i3
255bp
 E3_SUMO-protein_ligase_PIAS3_isoform_X3_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008022 F protein C-terminus binding
GO:0008270 F zinc ion binding
GO:0009725 P response to hormone
GO:0010628 P positive regulation of gene expression
GO:0015459 F potassium channel regulator activity
GO:0016607 C nuclear speck
GO:0016874 F ligase activity
GO:0016925 P protein sumoylation
GO:0019789 F SUMO transferase activity
GO:0019899 F enzyme binding
GO:0030425 C dendrite
GO:0033234 P negative regulation of protein sumoylation
GO:0033235 P positive regulation of protein sumoylation
GO:0045202 C synapse
GO:0045838 P positive regulation of membrane potential
GO:0046872 F metal ion binding
GO:0047485 F protein N-terminus binding
10327 O_BomoASG19296_5prime_partial:A_BomoASG_c30516_g1_i3
137bp
10328 O_BomoASG19297_complete:A_BomoASG_c30516_g1_i3
113bp
10329 O_BomoASG19298_complete:A_BomoASG_c30516_g1_i4
565bp
 E3_SUMO-protein_ligase_PIAS3_isoform_X6_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008022 F protein C-terminus binding
GO:0008270 F zinc ion binding
GO:0009725 P response to hormone
GO:0010628 P positive regulation of gene expression
GO:0015459 F potassium channel regulator activity
GO:0016607 C nuclear speck
GO:0016874 F ligase activity
GO:0016925 P protein sumoylation
GO:0019789 F SUMO transferase activity
GO:0019899 F enzyme binding
GO:0030425 C dendrite
GO:0033234 P negative regulation of protein sumoylation
GO:0033235 P positive regulation of protein sumoylation
GO:0045202 C synapse
GO:0045838 P positive regulation of membrane potential
GO:0046872 F metal ion binding
GO:0047485 F protein N-terminus binding
10330 O_BomoASG19299_complete:A_BomoASG_c30516_g1_i4
113bp
10331 O_BomoASG1929_complete:A_BomoASG_c12264_g1_i2
168bp
 uncharacterized_protein_LOC101746867_isoform_X2_[Bombyx_mori]
10332 O_BomoASG192_internal:A_BomoASG_c1580_g1_i1
100bp
 probable_peroxisomal_acyl-coenzyme_A_oxidase_1_isoform_X2_[Bombyx_mori]
GO:0000062 F fatty-acyl-CoA binding
GO:0003995 F acyl-CoA dehydrogenase activity
GO:0003997 F acyl-CoA oxidase activity
GO:0005777 C peroxisome
GO:0006091 P generation of precursor metabolites and energy
GO:0006629 P lipid metabolic process
GO:0006631 P fatty acid metabolic process
GO:0006635 P fatty acid beta-oxidation
GO:0006693 P prostaglandin metabolic process
GO:0008152 P metabolic process
GO:0009055 F electron transfer activity
GO:0016491 F oxidoreductase activity
GO:0016627 F oxidoreductase activity, acting on the CH-CH group of donors
GO:0019395 P fatty acid oxidation
GO:0033539 P fatty acid beta-oxidation using acyl-CoA dehydrogenase
GO:0033540 P fatty acid beta-oxidation using acyl-CoA oxidase
GO:0050660 F flavin adenine dinucleotide binding
GO:0052890 F oxidoreductase activity, acting on the CH-CH group of donors, with a flavin as acceptor
GO:0055088 P lipid homeostasis
GO:0055114 P obsolete oxidation-reduction process
10333 O_BomoASG19300_complete:A_BomoASG_c30516_g1_i5
601bp
 E3_SUMO-protein_ligase_PIAS3_isoform_X4_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008022 F protein C-terminus binding
GO:0008270 F zinc ion binding
GO:0009725 P response to hormone
GO:0010628 P positive regulation of gene expression
GO:0015459 F potassium channel regulator activity
GO:0016607 C nuclear speck
GO:0016874 F ligase activity
GO:0016925 P protein sumoylation
GO:0019789 F SUMO transferase activity
GO:0019899 F enzyme binding
GO:0030425 C dendrite
GO:0033234 P negative regulation of protein sumoylation
GO:0033235 P positive regulation of protein sumoylation
GO:0045202 C synapse
GO:0045838 P positive regulation of membrane potential
GO:0046872 F metal ion binding
GO:0047485 F protein N-terminus binding
10334 O_BomoASG19301_complete:A_BomoASG_c30516_g1_i5
113bp
10335 O_BomoASG19302_complete:A_BomoASG_c30516_g1_i6
566bp
 E3_SUMO-protein_ligase_PIAS3_isoform_X4_[Bombyx_mori]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0003677 F DNA binding
GO:0003714 F transcription corepressor activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007259 P receptor signaling pathway via JAK-STAT
GO:0008134 F transcription factor binding
GO:0008270 F zinc ion binding
GO:0016605 C PML body
GO:0016607 C nuclear speck
GO:0016874 F ligase activity
GO:0016925 P protein sumoylation
GO:0019789 F SUMO transferase activity
GO:0019899 F enzyme binding
GO:0031625 F ubiquitin protein ligase binding
GO:0032436 P positive regulation of proteasomal ubiquitin-dependent protein catabolic process
GO:0033235 P positive regulation of protein sumoylation
GO:0042127 P regulation of cell population proliferation
GO:0045444 P fat cell differentiation
GO:0046872 F metal ion binding
GO:0061665 F SUMO ligase activity
10336 O_BomoASG19303_complete:A_BomoASG_c30518_g4_i1
670bp
 protein_IWS1_homolog_[Bombyx_mori]
GO:0004719 F protein-L-isoaspartate (D-aspartate) O-methyltransferase activity
GO:0005737 C cytoplasm
GO:0006464 P cellular protein modification process
GO:0006479 P protein methylation
GO:0032259 P methylation
10337 O_BomoASG19304_complete:A_BomoASG_c30518_g4_i1
175bp
10338 O_BomoASG19305_complete:A_BomoASG_c30518_g4_i2
362bp
 protein_IWS1_homolog_[Bombyx_mori]
10339 O_BomoASG19306_complete:A_BomoASG_c30518_g4_i2
175bp
10340 O_BomoASG19307_3prime_partial:A_BomoASG_c30518_g4_i3
155bp
 protein_IWS1_homolog_[Bombyx_mori]
GO:0004719 F protein-L-isoaspartate (D-aspartate) O-methyltransferase activity
GO:0005737 C cytoplasm
GO:0006464 P cellular protein modification process
GO:0006479 P protein methylation
GO:0032259 P methylation
10341 O_BomoASG19308_complete:A_BomoASG_c30519_g1_i2
244bp
 uncharacterized_protein_LOC110384665_[Helicoverpa_armigera]
10342 O_BomoASG19309_3prime_partial:A_BomoASG_c30519_g1_i3
167bp
 cytochrome_b5-related_protein_[Bombyx_mori]
GO:0005739 C mitochondrion
GO:0005811 C lipid droplet
GO:0006629 P lipid metabolic process
GO:0009055 F electron transfer activity
GO:0016021 C integral component of membrane
GO:0016491 F oxidoreductase activity
GO:0020037 F heme binding
GO:0046872 F metal ion binding
GO:0055114 P obsolete oxidation-reduction process
10343 O_BomoASG1930_complete:A_BomoASG_c12265_g1_i1
442bp
 putative_ATP-dependent_RNA_helicase_me31b_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000932 C P-body
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0004004 F RNA helicase activity
GO:0004386 F helicase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005875 C microtubule associated complex
GO:0007095 P mitotic G2 DNA damage checkpoint signaling
GO:0007279 P pole cell formation
GO:0010494 C cytoplasmic stress granule
GO:0010501 P RNA secondary structure unwinding
GO:0010906 P regulation of glucose metabolic process
GO:0016787 F hydrolase activity
GO:0030707 P ovarian follicle cell development
GO:0033962 P P-body assembly
GO:0035195 P gene silencing by miRNA
GO:0043186 C P granule
GO:0046959 P habituation
GO:0050688 P regulation of defense response to virus
GO:0090328 P regulation of olfactory learning
10344 O_BomoASG19310_complete:A_BomoASG_c30519_g1_i8
239bp
 uncharacterized_protein_LOC110384665_[Helicoverpa_armigera]
10345 O_BomoASG19311_complete:A_BomoASG_c30519_g1_i10
216bp
 uncharacterized_protein_LOC110384665_[Helicoverpa_armigera]
10346 O_BomoASG19312_complete:A_BomoASG_c30519_g1_i12
269bp
 uncharacterized_protein_LOC110384665_[Helicoverpa_armigera]
10347 O_BomoASG19313_5prime_partial:A_BomoASG_c30521_g1_i1
260bp
 polyribonucleotide_nucleotidyltransferase_1,_mitochondrial_[Bombyx_mori]
GO:0000175 F 3'-5'-exoribonuclease activity
GO:0000957 P mitochondrial RNA catabolic process
GO:0000958 P mitochondrial mRNA catabolic process
GO:0000962 P positive regulation of mitochondrial RNA catabolic process
GO:0000964 P mitochondrial RNA 5'-end processing
GO:0000965 P mitochondrial RNA 3'-end processing
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0004518 F nuclease activity
GO:0004527 F exonuclease activity
GO:0004654 F polyribonucleotide nucleotidyltransferase activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005758 C mitochondrial intermembrane space
GO:0006396 P RNA processing
GO:0006397 P mRNA processing
GO:0006401 P RNA catabolic process
GO:0006402 P mRNA catabolic process
GO:0006810 P transport
GO:0008266 F poly(U) RNA binding
GO:0016020 C membrane
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0034046 F poly(G) binding
GO:0034599 P cellular response to oxidative stress
GO:0035198 F miRNA binding
GO:0035458 P cellular response to interferon-beta
GO:0035927 P RNA import into mitochondrion
GO:0035928 P rRNA import into mitochondrion
GO:0043457 P regulation of cellular respiration
GO:0043631 P RNA polyadenylation
GO:0044822 F RNA binding
GO:0045025 C mitochondrial degradosome
GO:0045926 P negative regulation of growth
GO:0051260 P protein homooligomerization
GO:0061014 P positive regulation of mRNA catabolic process
GO:0070207 P protein homotrimerization
GO:0070584 P mitochondrion morphogenesis
GO:0071042 P nuclear polyadenylation-dependent mRNA catabolic process
GO:0071850 P regulation of cell cycle
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
GO:0090503 P RNA phosphodiester bond hydrolysis, exonucleolytic
GO:0097222 P mitochondrial mRNA polyadenylation
GO:2000627 P positive regulation of miRNA catabolic process
GO:2000772 P regulation of cellular senescence
10348 O_BomoASG19314_3prime_partial:A_BomoASG_c30522_g1_i1
174bp
 PREDICTED:_RNA-directed_DNA_polymerase_from_mobile_element_jockey-like_isoform_X2_[Papilio_machaon]
10349 O_BomoASG19315_internal:A_BomoASG_c30522_g1_i2
352bp
 PREDICTED:_RNA-directed_DNA_polymerase_from_mobile_element_jockey-like_isoform_X2_[Papilio_machaon]
GO:0000287 F magnesium ion binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0004523 F RNA-DNA hybrid ribonuclease activity
GO:0004540 F ribonuclease activity
GO:0005737 C cytoplasm
GO:0006401 P RNA catabolic process
GO:0016787 F hydrolase activity
GO:0043137 P DNA replication, removal of RNA primer
GO:0046872 F metal ion binding
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
GO:0090501 P RNA phosphodiester bond hydrolysis
GO:0090502 P RNA phosphodiester bond hydrolysis, endonucleolytic
10350 O_BomoASG19316_internal:A_BomoASG_c30522_g1_i3
309bp
 PREDICTED:_RNA-directed_DNA_polymerase_from_mobile_element_jockey-like_isoform_X1_[Papilio_machaon]
GO:0000287 F magnesium ion binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0004523 F RNA-DNA hybrid ribonuclease activity
GO:0004540 F ribonuclease activity
GO:0005737 C cytoplasm
GO:0006401 P RNA catabolic process
GO:0016787 F hydrolase activity
GO:0043137 P DNA replication, removal of RNA primer
GO:0046872 F metal ion binding
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
GO:0090501 P RNA phosphodiester bond hydrolysis
GO:0090502 P RNA phosphodiester bond hydrolysis, endonucleolytic
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