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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
10141 O_BomoASG19128_3prime_partial:A_BomoASG_c30451_g1_i2
642bp
 carnitine_O-palmitoyltransferase_2,_mitochondrial_[Bombyx_mori]
GO:0004095 F carnitine O-palmitoyltransferase activity
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0006629 P lipid metabolic process
GO:0006631 P fatty acid metabolic process
GO:0006635 P fatty acid beta-oxidation
GO:0006810 P transport
GO:0016020 C membrane
GO:0016740 F transferase activity
GO:0016746 F acyltransferase activity
10142 O_BomoASG19129_internal:A_BomoASG_c30452_g2_i1
148bp
 PREDICTED:_uncharacterized_protein_LOC106135241_isoform_X1_[Amyelois_transitella]
10143 O_BomoASG1912_5prime_partial:A_BomoASG_c12243_g1_i1
150bp
 hypothetical_protein_ALC56_10323,_partial_[Trachymyrmex_septentrionalis]
10144 O_BomoASG19130_internal:A_BomoASG_c30452_g2_i2
126bp
10145 O_BomoASG19131_3prime_partial:A_BomoASG_c30452_g2_i3
523bp
10146 O_BomoASG19132_5prime_partial:A_BomoASG_c30452_g2_i3
247bp
 PREDICTED:_uncharacterized_protein_LOC106135241_isoform_X1_[Amyelois_transitella]
10147 O_BomoASG19133_complete:A_BomoASG_c30452_g2_i3
141bp
10148 O_BomoASG19134_3prime_partial:A_BomoASG_c30452_g2_i4
523bp
10149 O_BomoASG19135_5prime_partial:A_BomoASG_c30452_g2_i4
361bp
 PREDICTED:_uncharacterized_protein_LOC106135241_isoform_X1_[Amyelois_transitella]
10150 O_BomoASG19136_complete:A_BomoASG_c30452_g2_i4
141bp
10151 O_BomoASG19137_complete:A_BomoASG_c30452_g2_i4
114bp
10152 O_BomoASG19138_5prime_partial:A_BomoASG_c30453_g1_i1
106bp
 fadd_[Bombyx_mori]
10153 O_BomoASG19139_complete:A_BomoASG_c30453_g1_i3
222bp
 fadd_[Bombyx_mori]
GO:0002230 P positive regulation of defense response to virus by host
GO:0005123 F death receptor binding
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0006915 P apoptotic process
GO:0006919 P activation of cysteine-type endopeptidase activity involved in apoptotic process
GO:0006952 P defense response
GO:0006955 P immune response
GO:0006963 P positive regulation of antibacterial peptide biosynthetic process
GO:0007165 P signal transduction
GO:0007291 P sperm individualization
GO:0045089 P positive regulation of innate immune response
GO:0050700 F CARD domain binding
GO:0050829 P defense response to Gram-negative bacterium
GO:0061057 P peptidoglycan recognition protein signaling pathway
10154 O_BomoASG1913_complete:A_BomoASG_c12243_g1_i1
137bp
 Histone_H3c_[Culex_quinquefasciatus]
GO:0000786 C nucleosome
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0046982 F protein heterodimerization activity
10155 O_BomoASG19140_5prime_partial:A_BomoASG_c30454_g2_i2
147bp
 PREDICTED:_uncharacterized_protein_LOC105118166_[Populus_euphratica]
10156 O_BomoASG19141_internal:A_BomoASG_c30455_g1_i1
307bp
 uncharacterized_protein_LOC110377082_[Helicoverpa_armigera]
10157 O_BomoASG19142_5prime_partial:A_BomoASG_c30455_g1_i1
151bp
10158 O_BomoASG19143_internal:A_BomoASG_c30455_g1_i2
581bp
 titin_homolog_[Bombyx_mori]
10159 O_BomoASG19144_5prime_partial:A_BomoASG_c30455_g1_i2
151bp
10160 O_BomoASG19145_complete:A_BomoASG_c30455_g1_i2
141bp
10161 O_BomoASG19146_5prime_partial:A_BomoASG_c30455_g2_i1
157bp
 serine/arginine-rich_splicing_factor_4_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0001104 F transcription coregulator activity
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008134 F transcription factor binding
GO:0030374 F nuclear receptor coactivator activity
GO:0044822 F RNA binding
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0051091 P positive regulation of DNA-binding transcription factor activity
10162 O_BomoASG19147_5prime_partial:A_BomoASG_c30455_g2_i2
134bp
 serine/arginine-rich_splicing_factor_4_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0001104 F transcription coregulator activity
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008134 F transcription factor binding
GO:0030374 F nuclear receptor coactivator activity
GO:0044822 F RNA binding
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0051091 P positive regulation of DNA-binding transcription factor activity
10163 O_BomoASG19148_5prime_partial:A_BomoASG_c30455_g2_i3
868bp
 serine/arginine-rich_splicing_factor_4_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0001104 F transcription coregulator activity
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008134 F transcription factor binding
GO:0030374 F nuclear receptor coactivator activity
GO:0044822 F RNA binding
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0051091 P positive regulation of DNA-binding transcription factor activity
10164 O_BomoASG19149_complete:A_BomoASG_c30455_g2_i3
131bp
10165 O_BomoASG1914_complete:A_BomoASG_c12251_g1_i1
105bp
10166 O_BomoASG19150_complete:A_BomoASG_c30456_g1_i1
105bp
10167 O_BomoASG19151_complete:A_BomoASG_c30456_g1_i2
105bp
10168 O_BomoASG19152_complete:A_BomoASG_c30457_g2_i1
489bp
 protein_kinase_C_and_casein_kinase_substrate_in_neurons_protein_1_isoform_X1_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005768 C endosome
GO:0005769 C early endosome
GO:0005802 C trans-Golgi network
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0005901 C caveola
GO:0005911 C cell-cell junction
GO:0005925 C focal adhesion
GO:0006897 P endocytosis
GO:0007165 P signal transduction
GO:0008092 F cytoskeletal protein binding
GO:0008289 F lipid binding
GO:0016020 C membrane
GO:0019898 C extrinsic component of membrane
GO:0030036 P actin cytoskeleton organization
GO:0030659 C cytoplasmic vesicle membrane
GO:0031410 C cytoplasmic vesicle
GO:0032587 C ruffle membrane
GO:0036010 P protein localization to endosome
GO:0042802 F identical protein binding
GO:0042995 C cell projection
GO:0043231 C intracellular membrane-bounded organelle
GO:0045806 P negative regulation of endocytosis
GO:0048858 P cell projection morphogenesis
GO:0055038 C recycling endosome membrane
GO:0070062 C extracellular exosome
GO:0070300 F phosphatidic acid binding
GO:0070836 P caveola assembly
GO:0072584 P caveolin-mediated endocytosis
GO:0097320 P plasma membrane tubulation
10169 O_BomoASG19153_complete:A_BomoASG_c30457_g2_i2
521bp
 protein_kinase_C_and_casein_kinase_substrate_in_neurons_protein_1_isoform_X1_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005768 C endosome
GO:0005769 C early endosome
GO:0005802 C trans-Golgi network
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0005901 C caveola
GO:0005911 C cell-cell junction
GO:0005925 C focal adhesion
GO:0006897 P endocytosis
GO:0007165 P signal transduction
GO:0008092 F cytoskeletal protein binding
GO:0008289 F lipid binding
GO:0016020 C membrane
GO:0019898 C extrinsic component of membrane
GO:0030036 P actin cytoskeleton organization
GO:0030659 C cytoplasmic vesicle membrane
GO:0031410 C cytoplasmic vesicle
GO:0032587 C ruffle membrane
GO:0036010 P protein localization to endosome
GO:0042802 F identical protein binding
GO:0042995 C cell projection
GO:0043231 C intracellular membrane-bounded organelle
GO:0045806 P negative regulation of endocytosis
GO:0048858 P cell projection morphogenesis
GO:0055038 C recycling endosome membrane
GO:0070062 C extracellular exosome
GO:0070300 F phosphatidic acid binding
GO:0070836 P caveola assembly
GO:0072584 P caveolin-mediated endocytosis
GO:0097320 P plasma membrane tubulation
10170 O_BomoASG19154_complete:A_BomoASG_c30457_g2_i3
521bp
 protein_kinase_C_and_casein_kinase_substrate_in_neurons_protein_1_isoform_X1_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005768 C endosome
GO:0005769 C early endosome
GO:0005802 C trans-Golgi network
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0005901 C caveola
GO:0005911 C cell-cell junction
GO:0005925 C focal adhesion
GO:0006897 P endocytosis
GO:0007165 P signal transduction
GO:0008092 F cytoskeletal protein binding
GO:0008289 F lipid binding
GO:0016020 C membrane
GO:0019898 C extrinsic component of membrane
GO:0030036 P actin cytoskeleton organization
GO:0030659 C cytoplasmic vesicle membrane
GO:0031410 C cytoplasmic vesicle
GO:0032587 C ruffle membrane
GO:0036010 P protein localization to endosome
GO:0042802 F identical protein binding
GO:0042995 C cell projection
GO:0043231 C intracellular membrane-bounded organelle
GO:0045806 P negative regulation of endocytosis
GO:0048858 P cell projection morphogenesis
GO:0055038 C recycling endosome membrane
GO:0070062 C extracellular exosome
GO:0070300 F phosphatidic acid binding
GO:0070836 P caveola assembly
GO:0072584 P caveolin-mediated endocytosis
GO:0097320 P plasma membrane tubulation
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