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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
91 O_TrvaFAMAMG10145_5prime_partial:A_TrvaFAMAMG_TR9836c5_g1_i1
898bp
PREDICTED:_small_subunit_processome_component_20_homolog_[Bombyx_mori]
GO:0000447 P endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0000462 P maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0000472 P endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0000480 P endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0006364 P rRNA processing
GO:0008285 P negative regulation of cell population proliferation
GO:0030686 C 90S preribosome
GO:0030688 C preribosome, small subunit precursor
GO:0032040 C small-subunit processome
GO:0044822 F RNA binding
92 O_TrvaFAMAMG10146_complete:A_TrvaFAMAMG_TR9836c6_g1_i1
280bp
PREDICTED:_uncharacterized_protein_LOC106129825_[Amyelois_transitella]
93 O_TrvaFAMAMG10148_complete:A_TrvaFAMAMG_TR9836c6_g1_i3
280bp
PREDICTED:_uncharacterized_protein_LOC106129825_[Amyelois_transitella]
94 O_TrvaFAMAMG10150_complete:A_TrvaFAMAMG_TR9836c6_g1_i7
280bp
PREDICTED:_uncharacterized_protein_LOC106129825_[Amyelois_transitella]
95 O_TrvaFAMAMG10152_complete:A_TrvaFAMAMG_TR9836c6_g1_i9
280bp
PREDICTED:_uncharacterized_protein_LOC106129825_[Amyelois_transitella]
96 O_TrvaFAMAMG10154_internal:A_TrvaFAMAMG_TR9836c8_g1_i1
215bp
PREDICTED:_small_subunit_processome_component_20_homolog_[Bombyx_mori]
GO:0000447 P endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0000462 P maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0000472 P endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0000480 P endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0006364 P rRNA processing
GO:0008285 P negative regulation of cell population proliferation
GO:0030686 C 90S preribosome
GO:0030688 C preribosome, small subunit precursor
GO:0032040 C small-subunit processome
GO:0044822 F RNA binding
97 O_TrvaFAMAMG10156_complete:A_TrvaFAMAMG_TR9837c0_g1_i1
457bp
PREDICTED:_succinyl-CoA_ligase_[ADP-forming]_subunit_beta,_mitochondrial_[Papilio_xuthus]
GO:0000166 F nucleotide binding
GO:0003824 F catalytic activity
GO:0004775 F succinate-CoA ligase (ADP-forming) activity
GO:0005524 F ATP binding
GO:0005739 C mitochondrion
GO:0006099 P tricarboxylic acid cycle
GO:0008152 P metabolic process
GO:0016874 F ligase activity
GO:0046872 F metal ion binding
98 O_TrvaFAMAMG10159_complete:A_TrvaFAMAMG_TR9838c0_g1_i1
387bp
vacuolar_ATPase_subunit_C_[Bombyx_mori]
GO:0006810 P transport
GO:0006811 P ion transport
GO:0015078 F proton transmembrane transporter activity
GO:0015991 P proton transmembrane transport
GO:0015992 P proton transmembrane transport
GO:0033180 C proton-transporting V-type ATPase, V1 domain
99 O_TrvaFAMAMG1015_internal:A_TrvaFAMAMG_TR1728c1_g1_i1
103bp
PREDICTED:_myb-like_protein_X_[Bombyx_mori]
100 O_TrvaFAMAMG10160_complete:A_TrvaFAMAMG_TR9838c1_g1_i1
302bp
glutamyl-tRNA_amidotransferase_subunit_B_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0005524 F ATP binding
GO:0005739 C mitochondrion
GO:0006412 P translation
GO:0016874 F ligase activity
GO:0016884 F carbon-nitrogen ligase activity, with glutamine as amido-N-donor
101 O_TrvaFAMAMG10162_complete:A_TrvaFAMAMG_TR9838c1_g1_i2
302bp
glutamyl-tRNA_amidotransferase_subunit_B_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0005524 F ATP binding
GO:0005739 C mitochondrion
GO:0006412 P translation
GO:0016874 F ligase activity
GO:0016884 F carbon-nitrogen ligase activity, with glutamine as amido-N-donor
102 O_TrvaFAMAMG10164_complete:A_TrvaFAMAMG_TR9839c1_g1_i1
531bp
PREDICTED:_ankyrin_repeat_domain-containing_protein_SOWAHB_isoform_X1_[Papilio_xuthus]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
103 O_TrvaFAMAMG10166_complete:A_TrvaFAMAMG_TR9839c1_g1_i2
568bp
PREDICTED:_ankyrin_repeat_domain-containing_protein_SOWAHB_isoform_X1_[Papilio_xuthus]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
104 O_TrvaFAMAMG10168_complete:A_TrvaFAMAMG_TR9841c0_g1_i1
522bp
PREDICTED:_uncharacterized_protein_LOC106136276_[Amyelois_transitella]
GO:0003677 F DNA binding
GO:0003714 F transcription corepressor activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0007219 P Notch signaling pathway
GO:0007275 P multicellular organism development
GO:0008052 P sensory organ boundary specification
GO:0008586 P imaginal disc-derived wing vein morphogenesis
GO:0008587 P imaginal disc-derived wing margin morphogenesis
GO:0010941 P regulation of cell death
GO:0016360 P sensory organ precursor cell fate determination
GO:0035019 P somatic stem cell population maintenance
GO:0036335 P intestinal stem cell homeostasis
GO:0044719 P regulation of imaginal disc-derived wing size
GO:0045746 P negative regulation of Notch signaling pathway
GO:0046331 P lateral inhibition
GO:0048190 P wing disc dorsal/ventral pattern formation
GO:1903507 P negative regulation of nucleic acid-templated transcription
105 O_TrvaFAMAMG1016_complete:A_TrvaFAMAMG_TR1729c0_g1_i1
517bp
PREDICTED:_succinyl-CoA:3-ketoacid_coenzyme_A_transferase_1,_mitochondrial_[Papilio_xuthus]
GO:0005739 C mitochondrion
GO:0005759 C mitochondrial matrix
GO:0007420 P brain development
GO:0007507 P heart development
GO:0007584 P response to nutrient
GO:0008152 P metabolic process
GO:0008260 F 3-oxoacid CoA-transferase activity
GO:0008410 F CoA-transferase activity
GO:0009725 P response to hormone
GO:0014823 P response to activity
GO:0016740 F transferase activity
GO:0035774 P positive regulation of insulin secretion involved in cellular response to glucose stimulus
GO:0042182 P ketone catabolic process
GO:0042493 P response to xenobiotic stimulus
GO:0042594 P response to starvation
GO:0042803 F protein homodimerization activity
GO:0045471 P response to ethanol
GO:0046950 P cellular ketone body metabolic process
GO:0046952 P ketone body catabolic process
GO:0060612 P adipose tissue development
106 O_TrvaFAMAMG10170_complete:A_TrvaFAMAMG_TR9842c1_g1_i1
552bp
PREDICTED:_calcium_homeostasis_endoplasmic_reticulum_protein_isoform_X1_[Papilio_xuthus]
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005783 C endoplasmic reticulum
GO:0006396 P RNA processing
GO:0006874 P cellular calcium ion homeostasis
GO:0008285 P negative regulation of cell population proliferation
GO:0016020 C membrane
GO:0044325 F transmembrane transporter binding
GO:0044822 F RNA binding
GO:0048471 C perinuclear region of cytoplasm
GO:0051209 P release of sequestered calcium ion into cytosol
GO:0051533 P positive regulation of calcineurin-NFAT signaling cascade
107 O_TrvaFAMAMG10172_3prime_partial:A_TrvaFAMAMG_TR9842c1_g1_i1
122bp
PREDICTED:_calcium_homeostasis_endoplasmic_reticulum_protein_isoform_X2_[Bombyx_mori]
108 O_TrvaFAMAMG10173_3prime_partial:A_TrvaFAMAMG_TR9842c1_g1_i2
446bp
PREDICTED:_calcium_homeostasis_endoplasmic_reticulum_protein_isoform_X2_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005783 C endoplasmic reticulum
GO:0006396 P RNA processing
GO:0006874 P cellular calcium ion homeostasis
GO:0008285 P negative regulation of cell population proliferation
GO:0016020 C membrane
GO:0044325 F transmembrane transporter binding
GO:0044822 F RNA binding
GO:0048471 C perinuclear region of cytoplasm
GO:0051209 P release of sequestered calcium ion into cytosol
GO:0051533 P positive regulation of calcineurin-NFAT signaling cascade
109 O_TrvaFAMAMG10174_complete:A_TrvaFAMAMG_TR9842c1_g1_i2
273bp
PREDICTED:_calcium_homeostasis_endoplasmic_reticulum_protein_isoform_X1_[Amyelois_transitella]
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005783 C endoplasmic reticulum
GO:0006396 P RNA processing
GO:0006874 P cellular calcium ion homeostasis
GO:0008285 P negative regulation of cell population proliferation
GO:0016020 C membrane
GO:0044325 F transmembrane transporter binding
GO:0044822 F RNA binding
GO:0048471 C perinuclear region of cytoplasm
GO:0051209 P release of sequestered calcium ion into cytosol
GO:0051533 P positive regulation of calcineurin-NFAT signaling cascade
110 O_TrvaFAMAMG10176_3prime_partial:A_TrvaFAMAMG_TR9842c1_g1_i3
413bp
PREDICTED:_calcium_homeostasis_endoplasmic_reticulum_protein_isoform_X2_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005783 C endoplasmic reticulum
GO:0006396 P RNA processing
GO:0006874 P cellular calcium ion homeostasis
GO:0007399 P nervous system development
GO:0008285 P negative regulation of cell population proliferation
GO:0016020 C membrane
GO:0033017 C sarcoplasmic reticulum membrane
GO:0044325 F transmembrane transporter binding
GO:0044822 F RNA binding
GO:0048471 C perinuclear region of cytoplasm
GO:0051209 P release of sequestered calcium ion into cytosol
GO:0051533 P positive regulation of calcineurin-NFAT signaling cascade
111 O_TrvaFAMAMG10177_complete:A_TrvaFAMAMG_TR9842c1_g1_i3
273bp
PREDICTED:_calcium_homeostasis_endoplasmic_reticulum_protein_isoform_X1_[Amyelois_transitella]
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005783 C endoplasmic reticulum
GO:0006396 P RNA processing
GO:0006874 P cellular calcium ion homeostasis
GO:0008285 P negative regulation of cell population proliferation
GO:0016020 C membrane
GO:0044325 F transmembrane transporter binding
GO:0044822 F RNA binding
GO:0048471 C perinuclear region of cytoplasm
GO:0051209 P release of sequestered calcium ion into cytosol
GO:0051533 P positive regulation of calcineurin-NFAT signaling cascade
112 O_TrvaFAMAMG10179_complete:A_TrvaFAMAMG_TR9842c1_g1_i4
547bp
PREDICTED:_uncharacterized_protein_LOC106132143_[Amyelois_transitella]
GO:0000070 P mitotic sister chromatid segregation
GO:0003674 F molecular_function
GO:0003924 F GTPase activity
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005856 C cytoskeleton
GO:0008152 P metabolic process
GO:0090307 P mitotic spindle assembly
113 O_TrvaFAMAMG1017_complete:A_TrvaFAMAMG_TR1729c0_g2_i1
517bp
PREDICTED:_succinyl-CoA:3-ketoacid_coenzyme_A_transferase_1,_mitochondrial_[Papilio_xuthus]
GO:0005739 C mitochondrion
GO:0005759 C mitochondrial matrix
GO:0007420 P brain development
GO:0007507 P heart development
GO:0007584 P response to nutrient
GO:0008152 P metabolic process
GO:0008260 F 3-oxoacid CoA-transferase activity
GO:0008410 F CoA-transferase activity
GO:0009725 P response to hormone
GO:0014823 P response to activity
GO:0016740 F transferase activity
GO:0035774 P positive regulation of insulin secretion involved in cellular response to glucose stimulus
GO:0042182 P ketone catabolic process
GO:0042493 P response to xenobiotic stimulus
GO:0042594 P response to starvation
GO:0042803 F protein homodimerization activity
GO:0045471 P response to ethanol
GO:0046950 P cellular ketone body metabolic process
GO:0046952 P ketone body catabolic process
GO:0060612 P adipose tissue development
114 O_TrvaFAMAMG10180_complete:A_TrvaFAMAMG_TR9842c1_g1_i4
493bp
PREDICTED:_calcium_homeostasis_endoplasmic_reticulum_protein_isoform_X2_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005783 C endoplasmic reticulum
GO:0006396 P RNA processing
GO:0006874 P cellular calcium ion homeostasis
GO:0008285 P negative regulation of cell population proliferation
GO:0016020 C membrane
GO:0044325 F transmembrane transporter binding
GO:0044822 F RNA binding
GO:0048471 C perinuclear region of cytoplasm
GO:0051209 P release of sequestered calcium ion into cytosol
GO:0051533 P positive regulation of calcineurin-NFAT signaling cascade
115 O_TrvaFAMAMG10181_complete:A_TrvaFAMAMG_TR9842c1_g1_i4
187bp
PREDICTED:_calcium_homeostasis_endoplasmic_reticulum_protein_isoform_X1_[Amyelois_transitella]
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005783 C endoplasmic reticulum
GO:0006396 P RNA processing
GO:0006874 P cellular calcium ion homeostasis
GO:0007399 P nervous system development
GO:0008285 P negative regulation of cell population proliferation
GO:0016020 C membrane
GO:0033017 C sarcoplasmic reticulum membrane
GO:0044325 F transmembrane transporter binding
GO:0044822 F RNA binding
GO:0048471 C perinuclear region of cytoplasm
GO:0051209 P release of sequestered calcium ion into cytosol
GO:0051533 P positive regulation of calcineurin-NFAT signaling cascade
116 O_TrvaFAMAMG10183_complete:A_TrvaFAMAMG_TR9842c1_g1_i5
731bp
PREDICTED:_calcium_homeostasis_endoplasmic_reticulum_protein_isoform_X2_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005783 C endoplasmic reticulum
GO:0006396 P RNA processing
GO:0006874 P cellular calcium ion homeostasis
GO:0007399 P nervous system development
GO:0008285 P negative regulation of cell population proliferation
GO:0016020 C membrane
GO:0033017 C sarcoplasmic reticulum membrane
GO:0044325 F transmembrane transporter binding
GO:0044822 F RNA binding
GO:0048471 C perinuclear region of cytoplasm
GO:0051209 P release of sequestered calcium ion into cytosol
GO:0051533 P positive regulation of calcineurin-NFAT signaling cascade
117 O_TrvaFAMAMG10184_complete:A_TrvaFAMAMG_TR9842c1_g1_i5
547bp
PREDICTED:_uncharacterized_protein_LOC106132143_[Amyelois_transitella]
GO:0000070 P mitotic sister chromatid segregation
GO:0003674 F molecular_function
GO:0003924 F GTPase activity
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005856 C cytoskeleton
GO:0008152 P metabolic process
GO:0090307 P mitotic spindle assembly
118 O_TrvaFAMAMG10186_complete:A_TrvaFAMAMG_TR9842c1_g1_i7
547bp
PREDICTED:_uncharacterized_protein_LOC106132143_[Amyelois_transitella]
GO:0000070 P mitotic sister chromatid segregation
GO:0003674 F molecular_function
GO:0003924 F GTPase activity
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005856 C cytoskeleton
GO:0008152 P metabolic process
GO:0090307 P mitotic spindle assembly
119 O_TrvaFAMAMG10187_complete:A_TrvaFAMAMG_TR9842c1_g1_i7
496bp
PREDICTED:_calcium_homeostasis_endoplasmic_reticulum_protein_isoform_X2_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005783 C endoplasmic reticulum
GO:0006396 P RNA processing
GO:0006874 P cellular calcium ion homeostasis
GO:0008285 P negative regulation of cell population proliferation
GO:0016020 C membrane
GO:0044325 F transmembrane transporter binding
GO:0044822 F RNA binding
GO:0048471 C perinuclear region of cytoplasm
GO:0051209 P release of sequestered calcium ion into cytosol
GO:0051533 P positive regulation of calcineurin-NFAT signaling cascade
120 O_TrvaFAMAMG10188_complete:A_TrvaFAMAMG_TR9842c1_g1_i7
278bp
PREDICTED:_calcium_homeostasis_endoplasmic_reticulum_protein_isoform_X1_[Amyelois_transitella]
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005783 C endoplasmic reticulum
GO:0006396 P RNA processing
GO:0006874 P cellular calcium ion homeostasis
GO:0007399 P nervous system development
GO:0008285 P negative regulation of cell population proliferation
GO:0016020 C membrane
GO:0033017 C sarcoplasmic reticulum membrane
GO:0044325 F transmembrane transporter binding
GO:0044822 F RNA binding
GO:0048471 C perinuclear region of cytoplasm
GO:0051209 P release of sequestered calcium ion into cytosol
GO:0051533 P positive regulation of calcineurin-NFAT signaling cascade
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