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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
61 O_TrvaFAMAMG1008_internal:A_TrvaFAMAMG_TR1683c0_g1_i1
242bp
PREDICTED:_leucine-rich_repeat-containing_protein_1-like_[Bombyx_mori]
62 O_TrvaFAMAMG10090_5prime_partial:A_TrvaFAMAMG_TR9832c0_g2_i3
1307bp
PREDICTED:_uncharacterized_protein_LOC101738384_[Bombyx_mori]
GO:0005509 F calcium ion binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0005911 C cell-cell junction
GO:0005925 C focal adhesion
GO:0007015 P actin filament organization
GO:0007155 P cell adhesion
GO:0007156 P homophilic cell adhesion via plasma membrane adhesion molecules
GO:0007163 P establishment or maintenance of cell polarity
GO:0007267 P cell-cell signaling
GO:0009653 P anatomical structure morphogenesis
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016337 P cell-cell adhesion
GO:0016477 P cell migration
GO:0030027 C lamellipodium
GO:0030054 C cell junction
GO:0030175 C filopodium
GO:0048471 C perinuclear region of cytoplasm
GO:0070062 C extracellular exosome
63 O_TrvaFAMAMG10091_complete:A_TrvaFAMAMG_TR9832c0_g2_i4
197bp
PREDICTED:_uncharacterized_protein_LOC106101696_isoform_X2_[Papilio_polytes]
64 O_TrvaFAMAMG10093_complete:A_TrvaFAMAMG_TR9832c0_g2_i5
885bp
PREDICTED:_uncharacterized_protein_LOC101738384_[Bombyx_mori]
65 O_TrvaFAMAMG10095_internal:A_TrvaFAMAMG_TR9832c0_g2_i6
492bp
PREDICTED:_uncharacterized_protein_LOC101738384_[Bombyx_mori]
GO:0003682 F chromatin binding
GO:0005509 F calcium ion binding
GO:0005576 C extracellular region
GO:0005737 C cytoplasm
GO:0007155 P cell adhesion
GO:0016020 C membrane
66 O_TrvaFAMAMG10097_3prime_partial:A_TrvaFAMAMG_TR9832c0_g4_i1
947bp
PREDICTED:_uncharacterized_protein_LOC101738384_[Bombyx_mori]
GO:0005576 C extracellular region
GO:0006954 P inflammatory response
GO:0030246 F carbohydrate binding
GO:0046872 F metal ion binding
67 O_TrvaFAMAMG1009_internal:A_TrvaFAMAMG_TR1701c0_g1_i1
133bp
CRAL-TRIO_domain-containing_protein,_partial_[Manduca_sexta]
GO:0005215 F transporter activity
GO:0005622 C intracellular anatomical structure
GO:0006810 P transport
GO:0016020 C membrane
68 O_TrvaFAMAMG100_complete:A_TrvaFAMAMG_TR37c0_g1_i1
631bp
PREDICTED:_ribosomal_RNA_processing_protein_1_homolog_[Papilio_xuthus]
GO:0000022 P mitotic spindle elongation
GO:0005634 C nucleus
GO:0006364 P rRNA processing
GO:0016072 P rRNA metabolic process
GO:0030687 C preribosome, large subunit precursor
GO:0030688 C preribosome, small subunit precursor
69 O_TrvaFAMAMG10101_complete:A_TrvaFAMAMG_TR9832c0_g4_i1
103bp
70 O_TrvaFAMAMG10102_5prime_partial:A_TrvaFAMAMG_TR9833c0_g2_i1
535bp
PREDICTED:_uncharacterized_protein_CG43867_isoform_X6_[Papilio_xuthus]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0005856 C cytoskeleton
GO:0008150 P biological_process
71 O_TrvaFAMAMG10104_3prime_partial:A_TrvaFAMAMG_TR9833c0_g3_i1
194bp
PREDICTED:_uncharacterized_protein_CG43867_isoform_X5_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005856 C cytoskeleton
GO:0008150 P biological_process
72 O_TrvaFAMAMG10109_3prime_partial:A_TrvaFAMAMG_TR9833c0_g3_i2
120bp
PREDICTED:_uncharacterized_protein_CG43867_isoform_X9_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0005856 C cytoskeleton
GO:0008150 P biological_process
73 O_TrvaFAMAMG1010_internal:A_TrvaFAMAMG_TR1703c0_g1_i1
227bp
PREDICTED:_uncharacterized_protein_LOC101743036_[Bombyx_mori]
GO:0006718 P juvenile hormone biosynthetic process
GO:0008168 F methyltransferase activity
GO:0016740 F transferase activity
GO:0019010 F farnesoic acid O-methyltransferase activity
GO:0032259 P methylation
GO:0035049 F juvenile hormone acid methyltransferase activity
74 O_TrvaFAMAMG10110_5prime_partial:A_TrvaFAMAMG_TR9833c0_g5_i2
1220bp
PREDICTED:_uncharacterized_protein_CG43867_isoform_X9_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0005856 C cytoskeleton
GO:0008150 P biological_process
75 O_TrvaFAMAMG10112_5prime_partial:A_TrvaFAMAMG_TR9833c0_g5_i3
694bp
PREDICTED:_uncharacterized_protein_CG43867_isoform_X7_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0005856 C cytoskeleton
GO:0008150 P biological_process
76 O_TrvaFAMAMG10113_complete:A_TrvaFAMAMG_TR9833c0_g6_i1
893bp
PREDICTED:_F-BAR_domain_only_protein_2_isoform_X1_[Bombyx_mori]
GO:0001786 F phosphatidylserine binding
GO:0005546 F phosphatidylinositol-4,5-bisphosphate binding
GO:0005886 C plasma membrane
GO:0005905 C clathrin-coated pit
GO:0006897 P endocytosis
GO:0010324 P membrane invagination
GO:0016020 C membrane
GO:0035091 F phosphatidylinositol binding
GO:0043009 P chordate embryonic development
GO:0048268 P clathrin coat assembly
GO:0072583 P clathrin-dependent endocytosis
GO:0072659 P protein localization to plasma membrane
77 O_TrvaFAMAMG10116_complete:A_TrvaFAMAMG_TR9833c0_g10_i1
484bp
SH3_domain-binding_protein_5-like_[Papilio_xuthus]
GO:0004860 F protein kinase inhibitor activity
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0007301 P female germline ring canal formation
GO:0007498 P mesoderm development
GO:0007517 P muscle organ development
GO:0009952 P anterior/posterior pattern specification
GO:0017124 F SH3 domain binding
GO:0035556 P intracellular signal transduction
GO:0042694 P muscle cell fate specification
GO:0048644 P muscle organ morphogenesis
GO:0061099 P negative regulation of protein tyrosine kinase activity
78 O_TrvaFAMAMG10117_complete:A_TrvaFAMAMG_TR9833c0_g10_i2
471bp
PREDICTED:_SH3_domain-binding_protein_5_homolog_[Amyelois_transitella]
GO:0004860 F protein kinase inhibitor activity
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0007301 P female germline ring canal formation
GO:0007498 P mesoderm development
GO:0007517 P muscle organ development
GO:0009952 P anterior/posterior pattern specification
GO:0017124 F SH3 domain binding
GO:0035556 P intracellular signal transduction
GO:0042694 P muscle cell fate specification
GO:0048644 P muscle organ morphogenesis
GO:0061099 P negative regulation of protein tyrosine kinase activity
79 O_TrvaFAMAMG10118_complete:A_TrvaFAMAMG_TR9833c1_g1_i1
910bp
PREDICTED:_eukaryotic_translation_initiation_factor_4E_transporter-like_[Bombyx_mori]
GO:0000932 C P-body
GO:0003729 F mRNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006810 P transport
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016605 C PML body
GO:0016607 C nuclear speck
GO:0017148 P negative regulation of translation
GO:0019827 P stem cell population maintenance
GO:0043231 C intracellular membrane-bounded organelle
GO:0044822 F RNA binding
GO:0045665 P negative regulation of neuron differentiation
80 O_TrvaFAMAMG10124_complete:A_TrvaFAMAMG_TR9834c0_g1_i2
661bp
PREDICTED:_uncharacterized_protein_LOC101738425_isoform_X1_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008270 F zinc ion binding
GO:0043565 F sequence-specific DNA binding
GO:0044212 F transcription cis-regulatory region binding
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046872 F metal ion binding
GO:0048738 P cardiac muscle tissue development
81 O_TrvaFAMAMG10126_complete:A_TrvaFAMAMG_TR9834c0_g1_i3
661bp
PREDICTED:_uncharacterized_protein_LOC101738425_isoform_X1_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008270 F zinc ion binding
GO:0043565 F sequence-specific DNA binding
GO:0044212 F transcription cis-regulatory region binding
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046872 F metal ion binding
GO:0048738 P cardiac muscle tissue development
82 O_TrvaFAMAMG10131_complete:A_TrvaFAMAMG_TR9834c0_g1_i5
656bp
PREDICTED:_uncharacterized_protein_LOC101738425_isoform_X1_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008270 F zinc ion binding
GO:0043565 F sequence-specific DNA binding
GO:0044212 F transcription cis-regulatory region binding
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046872 F metal ion binding
GO:0048738 P cardiac muscle tissue development
83 O_TrvaFAMAMG10134_complete:A_TrvaFAMAMG_TR9834c0_g1_i6
656bp
PREDICTED:_uncharacterized_protein_LOC101738425_isoform_X1_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008270 F zinc ion binding
GO:0043565 F sequence-specific DNA binding
GO:0044212 F transcription cis-regulatory region binding
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046872 F metal ion binding
GO:0048738 P cardiac muscle tissue development
84 O_TrvaFAMAMG10137_complete:A_TrvaFAMAMG_TR9835c0_g1_i1
567bp
PREDICTED:_amidophosphoribosyltransferase-like_isoform_X1_[Papilio_polytes]
GO:0004044 F amidophosphoribosyltransferase activity
GO:0006164 P purine nucleotide biosynthetic process
GO:0006189 P 'de novo' IMP biosynthetic process
GO:0006541 P glutamine metabolic process
GO:0008340 P determination of adult lifespan
GO:0009113 P purine nucleobase biosynthetic process
GO:0016740 F transferase activity
GO:0016757 F glycosyltransferase activity
GO:0040016 P embryonic cleavage
GO:0046872 F metal ion binding
GO:0048477 P oogenesis
GO:0051536 F iron-sulfur cluster binding
GO:0051539 F 4 iron, 4 sulfur cluster binding
85 O_TrvaFAMAMG10139_5prime_partial:A_TrvaFAMAMG_TR9835c0_g1_i2
279bp
amidophosphoribosyltransferase_[Danaus_plexippus]
GO:0004044 F amidophosphoribosyltransferase activity
GO:0006164 P purine nucleotide biosynthetic process
GO:0006189 P 'de novo' IMP biosynthetic process
GO:0006541 P glutamine metabolic process
GO:0008340 P determination of adult lifespan
GO:0009113 P purine nucleobase biosynthetic process
GO:0016740 F transferase activity
GO:0016757 F glycosyltransferase activity
GO:0040016 P embryonic cleavage
GO:0046872 F metal ion binding
GO:0048477 P oogenesis
GO:0051536 F iron-sulfur cluster binding
GO:0051539 F 4 iron, 4 sulfur cluster binding
86 O_TrvaFAMAMG1013_internal:A_TrvaFAMAMG_TR1728c0_g1_i1
130bp
PREDICTED:_myb-like_protein_X_[Bombyx_mori]
87 O_TrvaFAMAMG10141_complete:A_TrvaFAMAMG_TR9836c3_g1_i1
775bp
PREDICTED:_MATH_and_LRR_domain-containing_protein_PFE0570w-like_[Amyelois_transitella]
88 O_TrvaFAMAMG10142_complete:A_TrvaFAMAMG_TR9836c3_g1_i2
775bp
PREDICTED:_MATH_and_LRR_domain-containing_protein_PFE0570w-like_[Amyelois_transitella]
89 O_TrvaFAMAMG10143_complete:A_TrvaFAMAMG_TR9836c4_g1_i1
1155bp
PREDICTED:_adenylate_cyclase_type_2-like_isoform_X2_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0002165 P instar larval or pupal development
GO:0004016 F adenylate cyclase activity
GO:0005524 F ATP binding
GO:0005622 C intracellular anatomical structure
GO:0005886 C plasma membrane
GO:0006171 P cAMP biosynthetic process
GO:0007189 P adenylate cyclase-activating G protein-coupled receptor signaling pathway
GO:0007193 P adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway
GO:0009190 P cyclic nucleotide biosynthetic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016829 F lyase activity
GO:0016849 F phosphorus-oxygen lyase activity
GO:0019933 P cAMP-mediated signaling
GO:0035556 P intracellular signal transduction
GO:0040015 P negative regulation of multicellular organism growth
GO:0042594 P response to starvation
GO:0046872 F metal ion binding
90 O_TrvaFAMAMG10144_complete:A_TrvaFAMAMG_TR9836c5_g1_i1
1108bp
PREDICTED:_small_subunit_processome_component_20_homolog_[Bombyx_mori]
GO:0000447 P endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0000462 P maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0000472 P endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0000480 P endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0006364 P rRNA processing
GO:0008285 P negative regulation of cell population proliferation
GO:0030686 C 90S preribosome
GO:0030688 C preribosome, small subunit precursor
GO:0032040 C small-subunit processome
GO:0044822 F RNA binding
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