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Search ORF from Assembled RNA-Seq

No.

Name
Length

Chromosome No./Scaffold Id
Scaffold Length

BLAST (vs nr)

Gene ontology

10081

O_TrvaFAMAMG25078_5prime_partial:A_TrvaFAMAMG_TR21696c0_g2_i2

215bp

PREDICTED:_uncharacterized_protein_LOC101745337_[Bombyx_mori]

10082

O_TrvaFAMAMG25079_3prime_partial:A_TrvaFAMAMG_TR21697c0_g3_i1

246bp

PREDICTED:_DNA-binding_protein_D-ETS-3_isoform_X2_[Papilio_machaon]

GO:0000981	F	DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0003677	F	DNA binding
GO:0003700	F	DNA-binding transcription factor activity
GO:0005634	C	nucleus
GO:0006355	P	regulation of transcription, DNA-templated
GO:0006357	P	regulation of transcription by RNA polymerase II
GO:0030154	P	cell differentiation
GO:0043565	F	sequence-specific DNA binding

10083

O_TrvaFAMAMG25080_complete:A_TrvaFAMAMG_TR21697c0_g3_i1

126bp

10084

O_TrvaFAMAMG25082_complete:A_TrvaFAMAMG_TR21697c0_g3_i2

126bp

10085

O_TrvaFAMAMG25083_3prime_partial:A_TrvaFAMAMG_TR21697c0_g3_i3

360bp

PREDICTED:_DNA-binding_protein_D-ETS-3_isoform_X1_[Papilio_machaon]

GO:0000981	F	DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0003677	F	DNA binding
GO:0003700	F	DNA-binding transcription factor activity
GO:0005634	C	nucleus
GO:0006355	P	regulation of transcription, DNA-templated
GO:0006357	P	regulation of transcription by RNA polymerase II
GO:0030154	P	cell differentiation
GO:0043565	F	sequence-specific DNA binding

10086

O_TrvaFAMAMG25085_complete:A_TrvaFAMAMG_TR21698c0_g2_i1

315bp

PREDICTED:_poly(A)-specific_ribonuclease_PARN-like_domain-containing_protein_1_[Papilio_xuthus]

GO:0003676	F	nucleic acid binding
GO:0005634	C	nucleus
GO:0016020	C	membrane
GO:0016021	C	integral component of membrane

10087

O_TrvaFAMAMG25086_complete:A_TrvaFAMAMG_TR21698c0_g2_i1

222bp

PREDICTED:_poly(A)-specific_ribonuclease_PARN-like_domain-containing_protein_1_[Papilio_polytes]

GO:0000166	F	nucleotide binding
GO:0003676	F	nucleic acid binding
GO:0003723	F	RNA binding
GO:0004518	F	nuclease activity
GO:0004527	F	exonuclease activity
GO:0004535	F	poly(A)-specific ribonuclease activity
GO:0005634	C	nucleus
GO:0005737	C	cytoplasm
GO:0006402	P	mRNA catabolic process
GO:0016787	F	hydrolase activity
GO:0030097	P	hemopoiesis
GO:0046872	F	metal ion binding
GO:0090305	P	nucleic acid phosphodiester bond hydrolysis
GO:0090503	P	RNA phosphodiester bond hydrolysis, exonucleolytic

10088

O_TrvaFAMAMG25087_complete:A_TrvaFAMAMG_TR21698c0_g2_i2

532bp

PREDICTED:_poly(A)-specific_ribonuclease_PARN-like_domain-containing_protein_1_[Papilio_xuthus]

GO:0003676	F	nucleic acid binding
GO:0005634	C	nucleus
GO:0016020	C	membrane
GO:0016021	C	integral component of membrane

10089

O_TrvaFAMAMG25088_5prime_partial:A_TrvaFAMAMG_TR21698c0_g2_i3

130bp

PREDICTED:_poly(A)-specific_ribonuclease_PARN-like_domain-containing_protein_1_[Plutella_xylostella]

10090

O_TrvaFAMAMG25089_complete:A_TrvaFAMAMG_TR21699c0_g2_i1

237bp

PREDICTED:_cysteine_and_histidine-rich_protein_1_homolog_[Papilio_xuthus]

GO:0005737	C	cytoplasm
GO:0008270	F	zinc ion binding
GO:0046872	F	metal ion binding

10091

O_TrvaFAMAMG25090_complete:A_TrvaFAMAMG_TR21699c0_g2_i2

350bp

PREDICTED:_cysteine_and_histidine-rich_protein_1_homolog_isoform_X4_[Amyelois_transitella]

GO:0003674	F	molecular_function
GO:0004842	F	ubiquitin-protein transferase activity
GO:0005575	C	cellular_component
GO:0008150	P	biological_process
GO:0008270	F	zinc ion binding
GO:0016567	P	protein ubiquitination
GO:0046872	F	metal ion binding

10092

O_TrvaFAMAMG25091_5prime_partial:A_TrvaFAMAMG_TR21700c0_g1_i1

181bp

hypothetical_protein_RR48_06655_[Papilio_machaon]

10093

O_TrvaFAMAMG25092_complete:A_TrvaFAMAMG_TR21700c0_g1_i2

189bp

PREDICTED:_uncharacterized_protein_LOC106713486_[Papilio_machaon]

10094

O_TrvaFAMAMG25093_complete:A_TrvaFAMAMG_TR21700c0_g1_i2

171bp

Leucine-rich_repeat-containing_protein_56_[Papilio_machaon]

10095

O_TrvaFAMAMG25094_complete:A_TrvaFAMAMG_TR21700c0_g1_i3

171bp

Leucine-rich_repeat-containing_protein_56_[Papilio_machaon]

10096

O_TrvaFAMAMG25095_complete:A_TrvaFAMAMG_TR21700c0_g1_i3

143bp

PREDICTED:_uncharacterized_protein_LOC105387190_[Plutella_xylostella]

10097

O_TrvaFAMAMG25096_complete:A_TrvaFAMAMG_TR21700c0_g1_i4

178bp

hypothetical_protein_RR48_06655_[Papilio_machaon]

10098

O_TrvaFAMAMG25097_complete:A_TrvaFAMAMG_TR21700c0_g1_i4

171bp

Leucine-rich_repeat-containing_protein_56_[Papilio_machaon]

10099

O_TrvaFAMAMG25098_complete:A_TrvaFAMAMG_TR21700c0_g1_i4

143bp

PREDICTED:_uncharacterized_protein_LOC105387190_[Plutella_xylostella]

10100

O_TrvaFAMAMG25099_complete:A_TrvaFAMAMG_TR21700c0_g1_i5

171bp

Leucine-rich_repeat-containing_protein_56_[Papilio_machaon]

10101

O_TrvaFAMAMG250_complete:A_TrvaFAMAMG_TR532c0_g1_i1

1071bp

PREDICTED:_eukaryotic_translation_initiation_factor_4_gamma_3-like_[Bombyx_mori]

GO:0000339	F	RNA cap binding
GO:0003723	F	RNA binding
GO:0003743	F	translation initiation factor activity
GO:0005829	C	cytosol
GO:0006412	P	translation
GO:0006413	P	translational initiation
GO:0006417	P	regulation of translation
GO:0006446	P	regulation of translational initiation
GO:0008135	F	translation factor activity, RNA binding
GO:0016032	P	viral process
GO:0016281	C	eukaryotic translation initiation factor 4F complex
GO:0044822	F	RNA binding