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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
10051 O_TrvaFAMAMG25034_5prime_partial:A_TrvaFAMAMG_TR21687c0_g1_i1
486bp
PREDICTED:_serine/arginine-rich_splicing_factor_4_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0001104 F transcription coregulator activity
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007005 P mitochondrion organization
GO:0008134 F transcription factor binding
GO:0030374 F nuclear receptor coactivator activity
GO:0044822 F RNA binding
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0051091 P positive regulation of DNA-binding transcription factor activity
10052 O_TrvaFAMAMG25035_3prime_partial:A_TrvaFAMAMG_TR21687c0_g2_i1
1109bp
PREDICTED:_uncharacterized_protein_LOC106133051_[Amyelois_transitella]
10053 O_TrvaFAMAMG25039_5prime_partial:A_TrvaFAMAMG_TR21688c0_g1_i1
1035bp
PREDICTED:_centrosomal_protein_of_164_kDa_isoform_X1_[Papilio_xuthus]
10054 O_TrvaFAMAMG25042_5prime_partial:A_TrvaFAMAMG_TR21688c0_g1_i3
548bp
PREDICTED:_centrosomal_protein_of_164_kDa_isoform_X3_[Bombyx_mori]
10055 O_TrvaFAMAMG25043_3prime_partial:A_TrvaFAMAMG_TR21688c0_g1_i3
460bp
PREDICTED:_centrosomal_protein_of_164_kDa_isoform_X2_[Papilio_xuthus]
10056 O_TrvaFAMAMG25046_internal:A_TrvaFAMAMG_TR21688c0_g2_i1
238bp
PREDICTED:_centrosomal_protein_of_164_kDa_isoform_X3_[Bombyx_mori]
10057 O_TrvaFAMAMG25048_internal:A_TrvaFAMAMG_TR21688c1_g1_i1
201bp
PREDICTED:_centrosomal_protein_of_164_kDa_isoform_X3_[Bombyx_mori]
GO:0000086 P G2/M transition of mitotic cell cycle
GO:0005515 F protein binding
GO:0005615 C extracellular space
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0005814 C centriole
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0006281 P DNA repair
GO:0006974 P cellular response to DNA damage stimulus
GO:0007049 P cell cycle
GO:0007067 P mitotic cell cycle
GO:0030030 P cell projection organization
GO:0042384 P cilium assembly
GO:0051301 P cell division
GO:0097539 C ciliary transition fiber
10058 O_TrvaFAMAMG25049_5prime_partial:A_TrvaFAMAMG_TR21689c0_g1_i1
263bp
PREDICTED:_uncharacterized_protein_LOC101735869_[Bombyx_mori]
10059 O_TrvaFAMAMG25050_5prime_partial:A_TrvaFAMAMG_TR21690c0_g2_i1
659bp
PREDICTED:_alsin_[Bombyx_mori]
GO:0001662 P behavioral fear response
GO:0001701 P in utero embryonic development
GO:0001726 C ruffle
GO:0001881 P receptor recycling
GO:0005085 F guanyl-nucleotide exchange factor activity
GO:0005089 F guanyl-nucleotide exchange factor activity
GO:0005096 F GTPase activator activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005769 C early endosome
GO:0005813 C centrosome
GO:0005829 C cytosol
GO:0006979 P response to oxidative stress
GO:0007032 P endosome organization
GO:0007041 P lysosomal transport
GO:0007409 P axonogenesis
GO:0007528 P neuromuscular junction development
GO:0007626 P locomotory behavior
GO:0008104 P protein localization
GO:0008219 P cell death
GO:0014069 C postsynaptic density
GO:0016020 C membrane
GO:0016050 P vesicle organization
GO:0016197 P endosomal transport
GO:0016601 P Rac protein signal transduction
GO:0017112 F guanyl-nucleotide exchange factor activity
GO:0017137 F small GTPase binding
GO:0030027 C lamellipodium
GO:0030424 C axon
GO:0030425 C dendrite
GO:0030426 C growth cone
GO:0030676 F guanyl-nucleotide exchange factor activity
GO:0031982 C vesicle
GO:0035023 P regulation of Rho protein signal transduction
GO:0035249 P synaptic transmission, glutamatergic
GO:0042802 F identical protein binding
GO:0042803 F protein homodimerization activity
GO:0043005 C neuron projection
GO:0043025 C neuronal cell body
GO:0043087 P regulation of GTPase activity
GO:0043197 C dendritic spine
GO:0043231 C intracellular membrane-bounded organelle
GO:0043234 C protein-containing complex
GO:0043539 F protein serine/threonine kinase activator activity
GO:0043547 P positive regulation of GTPase activity
GO:0045860 P positive regulation of protein kinase activity
GO:0048365 F small GTPase binding
GO:0048812 P neuron projection morphogenesis
GO:0051036 P regulation of endosome size
GO:0051260 P protein homooligomerization
GO:0071902 P positive regulation of protein serine/threonine kinase activity
10060 O_TrvaFAMAMG25051_3prime_partial:A_TrvaFAMAMG_TR21690c0_g3_i1
945bp
PREDICTED:_alsin_[Bombyx_mori]
GO:0001662 P behavioral fear response
GO:0001701 P in utero embryonic development
GO:0001726 C ruffle
GO:0001881 P receptor recycling
GO:0005085 F guanyl-nucleotide exchange factor activity
GO:0005089 F guanyl-nucleotide exchange factor activity
GO:0005096 F GTPase activator activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005769 C early endosome
GO:0005813 C centrosome
GO:0005829 C cytosol
GO:0006979 P response to oxidative stress
GO:0007032 P endosome organization
GO:0007041 P lysosomal transport
GO:0007409 P axonogenesis
GO:0007528 P neuromuscular junction development
GO:0007626 P locomotory behavior
GO:0008104 P protein localization
GO:0008219 P cell death
GO:0014069 C postsynaptic density
GO:0016020 C membrane
GO:0016050 P vesicle organization
GO:0016197 P endosomal transport
GO:0016601 P Rac protein signal transduction
GO:0017112 F guanyl-nucleotide exchange factor activity
GO:0017137 F small GTPase binding
GO:0030027 C lamellipodium
GO:0030424 C axon
GO:0030425 C dendrite
GO:0030426 C growth cone
GO:0030676 F guanyl-nucleotide exchange factor activity
GO:0031982 C vesicle
GO:0035023 P regulation of Rho protein signal transduction
GO:0035249 P synaptic transmission, glutamatergic
GO:0042802 F identical protein binding
GO:0042803 F protein homodimerization activity
GO:0043005 C neuron projection
GO:0043025 C neuronal cell body
GO:0043087 P regulation of GTPase activity
GO:0043197 C dendritic spine
GO:0043231 C intracellular membrane-bounded organelle
GO:0043234 C protein-containing complex
GO:0043539 F protein serine/threonine kinase activator activity
GO:0043547 P positive regulation of GTPase activity
GO:0045860 P positive regulation of protein kinase activity
GO:0048365 F small GTPase binding
GO:0048812 P neuron projection morphogenesis
GO:0051036 P regulation of endosome size
GO:0051260 P protein homooligomerization
GO:0071902 P positive regulation of protein serine/threonine kinase activity
10061 O_TrvaFAMAMG25052_complete:A_TrvaFAMAMG_TR21691c0_g1_i1
306bp
PREDICTED:_uncharacterized_protein_LOC105382190_[Plutella_xylostella]
10062 O_TrvaFAMAMG25053_complete:A_TrvaFAMAMG_TR21691c1_g1_i1
971bp
PREDICTED:_RNA-directed_DNA_polymerase_from_mobile_element_jockey-like_isoform_X1_[Amyelois_transitella]
GO:0003964 F RNA-directed DNA polymerase activity
GO:0005575 C cellular_component
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006313 P transposition, DNA-mediated
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
10063 O_TrvaFAMAMG25054_complete:A_TrvaFAMAMG_TR21692c0_g1_i1
350bp
PREDICTED:_protein_FAM57A_[Bombyx_mori]
GO:0000139 C Golgi membrane
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0005794 C Golgi apparatus
GO:0006629 P lipid metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0045599 P negative regulation of fat cell differentiation
GO:0046513 P ceramide biosynthetic process
GO:0050291 F sphingosine N-acyltransferase activity
10064 O_TrvaFAMAMG25055_complete:A_TrvaFAMAMG_TR21692c0_g1_i1
167bp
10065 O_TrvaFAMAMG25056_internal:A_TrvaFAMAMG_TR21693c0_g1_i1
105bp
PREDICTED:_putative_leucine-rich_repeat-containing_protein_DDB_G0290503_isoform_X1_[Amyelois_transitella]
10066 O_TrvaFAMAMG25057_internal:A_TrvaFAMAMG_TR21693c0_g2_i1
194bp
10067 O_TrvaFAMAMG25059_internal:A_TrvaFAMAMG_TR21693c0_g3_i1
203bp
10068 O_TrvaFAMAMG25061_internal:A_TrvaFAMAMG_TR21693c0_g4_i1
106bp
PREDICTED:_putative_leucine-rich_repeat-containing_protein_DDB_G0290503_isoform_X2_[Amyelois_transitella]
10069 O_TrvaFAMAMG25062_3prime_partial:A_TrvaFAMAMG_TR21693c1_g1_i1
171bp
hypothetical_protein_RR46_07000_[Papilio_xuthus]
10070 O_TrvaFAMAMG25063_5prime_partial:A_TrvaFAMAMG_TR21693c1_g2_i1
261bp
10071 O_TrvaFAMAMG25066_5prime_partial:A_TrvaFAMAMG_TR21693c2_g1_i3
128bp
10072 O_TrvaFAMAMG25067_complete:A_TrvaFAMAMG_TR21694c0_g1_i1
198bp
PREDICTED:_uncharacterized_protein_LOC101742037_[Bombyx_mori]
10073 O_TrvaFAMAMG25068_5prime_partial:A_TrvaFAMAMG_TR21694c0_g1_i2
224bp
PREDICTED:_uncharacterized_protein_LOC101742037_[Bombyx_mori]
10074 O_TrvaFAMAMG2506_complete:A_TrvaFAMAMG_TR3374c2_g3_i1
731bp
PREDICTED:_myosin-7B_isoform_X2_[Papilio_polytes]
GO:0003729 F mRNA binding
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0006810 P transport
GO:0007275 P multicellular organism development
GO:0007293 P germarium-derived egg chamber formation
GO:0007294 P germarium-derived oocyte fate determination
GO:0007309 P oocyte axis specification
GO:0007310 P oocyte dorsal/ventral axis specification
GO:0007312 P oocyte nucleus migration involved in oocyte dorsal/ventral axis specification
GO:0007314 P oocyte anterior/posterior axis specification
GO:0008103 P oocyte microtubule cytoskeleton polarization
GO:0008298 P intracellular mRNA localization
GO:0016325 P oocyte microtubule cytoskeleton organization
GO:0017137 F small GTPase binding
GO:0019233 P sensory perception of pain
GO:0030100 P regulation of endocytosis
GO:0030154 P cell differentiation
GO:0030669 C clathrin-coated endocytic vesicle membrane
GO:0030727 P germarium-derived female germ-line cyst formation
GO:0032050 F clathrin heavy chain binding
GO:0045502 F dynein complex binding
GO:0048477 P oogenesis
GO:0048488 P synaptic vesicle endocytosis
GO:0050658 P RNA transport
GO:0051028 P mRNA transport
GO:0070727 P cellular macromolecule localization
GO:2000302 P positive regulation of synaptic vesicle exocytosis
GO:2000370 P positive regulation of clathrin-dependent endocytosis
10075 O_TrvaFAMAMG25072_complete:A_TrvaFAMAMG_TR21695c0_g1_i1
580bp
PREDICTED:_uncharacterized_protein_LOC106134724_[Amyelois_transitella]
10076 O_TrvaFAMAMG25073_complete:A_TrvaFAMAMG_TR21695c0_g1_i2
562bp
PREDICTED:_uncharacterized_protein_LOC106134724_[Amyelois_transitella]
10077 O_TrvaFAMAMG25074_3prime_partial:A_TrvaFAMAMG_TR21696c0_g1_i1
336bp
PREDICTED:_coiled-coil_domain-containing_protein_65_[Amyelois_transitella]
10078 O_TrvaFAMAMG25075_complete:A_TrvaFAMAMG_TR21696c0_g1_i3
284bp
PREDICTED:_coiled-coil_domain-containing_protein_65_[Bombyx_mori]
10079 O_TrvaFAMAMG25076_5prime_partial:A_TrvaFAMAMG_TR21696c0_g1_i4
148bp
PREDICTED:_coiled-coil_domain-containing_protein_65_[Bombyx_mori]
10080 O_TrvaFAMAMG25077_complete:A_TrvaFAMAMG_TR21696c0_g2_i1
119bp
PREDICTED:_uncharacterized_protein_LOC101745337_[Bombyx_mori]
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