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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
9661 O_BomoSK18697_internal:A_BomoSK_comp14159_c0_seq2
141bp
9662 O_BomoSK18698_internal:A_BomoSK_comp14159_c0_seq3
334bp
9663 O_BomoSK18699_complete:A_BomoSK_comp14159_c0_seq3
207bp
9664 O_BomoSK1869_5prime_partial:A_BomoSK_comp4681_c0_seq1
163bp
9665 O_BomoSK186_internal:A_BomoSK_comp625_c0_seq1
105bp
 PREDICTED:_facilitated_trehalose_transporter_Tret1-like_isoform_X2_[Bombyx_mori]
GO:0005215 F transporter activity
GO:0005355 F glucose transmembrane transporter activity
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0008643 P carbohydrate transport
GO:0015758 P glucose transmembrane transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0022857 F transmembrane transporter activity
GO:0022891 F transmembrane transporter activity
GO:0055085 P transmembrane transport
GO:1904659 P glucose transmembrane transport
9666 O_BomoSK18700_complete:A_BomoSK_comp14160_c0_seq1
123bp
9667 O_BomoSK18701_complete:A_BomoSK_comp14160_c0_seq2
462bp
GO:0000166 F nucleotide binding
GO:0004103 F choline kinase activity
GO:0004305 F ethanolamine kinase activity
GO:0005524 F ATP binding
GO:0005829 C cytosol
GO:0006629 P lipid metabolic process
GO:0006646 P phosphatidylethanolamine biosynthetic process
GO:0006656 P phosphatidylcholine biosynthetic process
GO:0006657 P CDP-choline pathway
GO:0008654 P phospholipid biosynthetic process
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0046474 P glycerophospholipid biosynthetic process
9668 O_BomoSK18702_complete:A_BomoSK_comp14160_c0_seq2
169bp
9669 O_BomoSK18703_complete:A_BomoSK_comp14160_c0_seq2
123bp
9670 O_BomoSK18704_5prime_partial:A_BomoSK_comp14160_c0_seq3
436bp
GO:0000166 F nucleotide binding
GO:0004103 F choline kinase activity
GO:0004305 F ethanolamine kinase activity
GO:0005524 F ATP binding
GO:0005829 C cytosol
GO:0006629 P lipid metabolic process
GO:0006646 P phosphatidylethanolamine biosynthetic process
GO:0006656 P phosphatidylcholine biosynthetic process
GO:0006657 P CDP-choline pathway
GO:0008654 P phospholipid biosynthetic process
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0046474 P glycerophospholipid biosynthetic process
9671 O_BomoSK18705_complete:A_BomoSK_comp14160_c0_seq3
169bp
9672 O_BomoSK18706_complete:A_BomoSK_comp14160_c0_seq3
120bp
9673 O_BomoSK18707_5prime_partial:A_BomoSK_comp14160_c0_seq3
113bp
9674 O_BomoSK18708_5prime_partial:A_BomoSK_comp14160_c0_seq4
490bp
GO:0000166 F nucleotide binding
GO:0004103 F choline kinase activity
GO:0004305 F ethanolamine kinase activity
GO:0005524 F ATP binding
GO:0005829 C cytosol
GO:0006629 P lipid metabolic process
GO:0006646 P phosphatidylethanolamine biosynthetic process
GO:0006656 P phosphatidylcholine biosynthetic process
GO:0006657 P CDP-choline pathway
GO:0008654 P phospholipid biosynthetic process
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0046474 P glycerophospholipid biosynthetic process
9675 O_BomoSK18709_complete:A_BomoSK_comp14160_c0_seq4
169bp
9676 O_BomoSK1870_complete:A_BomoSK_comp4681_c0_seq1
113bp
 Ca2_/calmodulin-dependent_protein_kinase_kinase_beta_and_related_serine/threonine_protein_kinases_[Ceraceosorus_bombacis]
9677 O_BomoSK18710_complete:A_BomoSK_comp14160_c0_seq4
123bp
9678 O_BomoSK18711_5prime_partial:A_BomoSK_comp14160_c0_seq4
113bp
9679 O_BomoSK18712_complete:A_BomoSK_comp14160_c0_seq5
408bp
GO:0000166 F nucleotide binding
GO:0004103 F choline kinase activity
GO:0004305 F ethanolamine kinase activity
GO:0005524 F ATP binding
GO:0005829 C cytosol
GO:0006629 P lipid metabolic process
GO:0006646 P phosphatidylethanolamine biosynthetic process
GO:0006656 P phosphatidylcholine biosynthetic process
GO:0006657 P CDP-choline pathway
GO:0008654 P phospholipid biosynthetic process
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0046474 P glycerophospholipid biosynthetic process
9680 O_BomoSK18713_complete:A_BomoSK_comp14160_c0_seq5
169bp
9681 O_BomoSK18714_complete:A_BomoSK_comp14160_c0_seq5
120bp
9682 O_BomoSK18715_5prime_partial:A_BomoSK_comp14162_c0_seq1
181bp
GO:0004721 F phosphoprotein phosphatase activity
GO:0004725 F protein tyrosine phosphatase activity
GO:0006470 P protein dephosphorylation
GO:0008152 P metabolic process
GO:0016787 F hydrolase activity
GO:0017124 F SH3 domain binding
GO:0035335 P peptidyl-tyrosine dephosphorylation
9683 O_BomoSK18716_5prime_partial:A_BomoSK_comp14162_c1_seq2
226bp
9684 O_BomoSK18717_3prime_partial:A_BomoSK_comp14164_c0_seq1
422bp
GO:0004843 F thiol-dependent deubiquitinase
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006281 P DNA repair
GO:0006508 P proteolysis
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0008233 F peptidase activity
GO:0008234 F cysteine-type peptidase activity
GO:0008270 F zinc ion binding
GO:0016579 P protein deubiquitination
GO:0016787 F hydrolase activity
GO:0036459 F thiol-dependent deubiquitinase
GO:0046872 F metal ion binding
9685 O_BomoSK18718_5prime_partial:A_BomoSK_comp14164_c0_seq1
404bp
9686 O_BomoSK18719_complete:A_BomoSK_comp14164_c0_seq1
359bp
9687 O_BomoSK1871_complete:A_BomoSK_comp4682_c0_seq1
588bp
 PREDICTED:_negative_elongation_factor_B_[Amyelois_transitella]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007070 P obsolete negative regulation of transcription from RNA polymerase II promoter during mitotic cell cycle
GO:0017053 C transcription repressor complex
GO:0032021 C NELF complex
GO:0034244 P negative regulation of transcription elongation from RNA polymerase II promoter
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0045944 P positive regulation of transcription by RNA polymerase II
9688 O_BomoSK18720_complete:A_BomoSK_comp14164_c0_seq1
252bp
GO:0004843 F thiol-dependent deubiquitinase
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006281 P DNA repair
GO:0006508 P proteolysis
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0008233 F peptidase activity
GO:0008234 F cysteine-type peptidase activity
GO:0008270 F zinc ion binding
GO:0016579 P protein deubiquitination
GO:0016787 F hydrolase activity
GO:0036459 F thiol-dependent deubiquitinase
GO:0046872 F metal ion binding
9689 O_BomoSK18721_complete:A_BomoSK_comp14164_c0_seq2
131bp
GO:0003674 F molecular_function
GO:0003713 F transcription coactivator activity
GO:0004197 F cysteine-type endopeptidase activity
GO:0004843 F thiol-dependent deubiquitinase
GO:0005575 C cellular_component
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0006508 P proteolysis
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0006974 P cellular response to DNA damage stimulus
GO:0007049 P cell cycle
GO:0007067 P mitotic cell cycle
GO:0008150 P biological_process
GO:0008233 F peptidase activity
GO:0008234 F cysteine-type peptidase activity
GO:0008270 F zinc ion binding
GO:0010468 P regulation of gene expression
GO:0016568 P chromatin organization
GO:0016578 P histone deubiquitination
GO:0016579 P protein deubiquitination
GO:0016787 F hydrolase activity
GO:0035522 P monoubiquitinated histone H2A deubiquitination
GO:0036459 F thiol-dependent deubiquitinase
GO:0042393 F histone binding
GO:0043130 F ubiquitin binding
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0045901 P positive regulation of translational elongation
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046872 F metal ion binding
GO:0051289 P protein homotetramerization
GO:0051301 P cell division
GO:0051726 P regulation of cell cycle
GO:0070537 P histone H2A K63-linked deubiquitination
9690 O_BomoSK18722_complete:A_BomoSK_comp14164_c0_seq3
588bp
GO:0003674 F molecular_function
GO:0003713 F transcription coactivator activity
GO:0004197 F cysteine-type endopeptidase activity
GO:0004843 F thiol-dependent deubiquitinase
GO:0005575 C cellular_component
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0006508 P proteolysis
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0006974 P cellular response to DNA damage stimulus
GO:0007049 P cell cycle
GO:0007067 P mitotic cell cycle
GO:0008150 P biological_process
GO:0008233 F peptidase activity
GO:0008234 F cysteine-type peptidase activity
GO:0008270 F zinc ion binding
GO:0010468 P regulation of gene expression
GO:0016568 P chromatin organization
GO:0016578 P histone deubiquitination
GO:0016579 P protein deubiquitination
GO:0016787 F hydrolase activity
GO:0035522 P monoubiquitinated histone H2A deubiquitination
GO:0036459 F thiol-dependent deubiquitinase
GO:0042393 F histone binding
GO:0043130 F ubiquitin binding
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0045901 P positive regulation of translational elongation
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046872 F metal ion binding
GO:0051289 P protein homotetramerization
GO:0051301 P cell division
GO:0051726 P regulation of cell cycle
GO:0070537 P histone H2A K63-linked deubiquitination
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