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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
9421 O_BomoSK18480_complete:A_BomoSK_comp14124_c0_seq4
124bp
9422 O_BomoSK18481_complete:A_BomoSK_comp14124_c0_seq4
100bp
9423 O_BomoSK18482_complete:A_BomoSK_comp14124_c0_seq5
124bp
9424 O_BomoSK18483_complete:A_BomoSK_comp14125_c0_seq3
562bp
GO:0000977 F RNA polymerase II transcription regulatory region sequence-specific DNA binding
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
9425 O_BomoSK18484_3prime_partial:A_BomoSK_comp14126_c0_seq1
146bp
GO:0003676 F nucleic acid binding
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0005634 C nucleus
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006313 P transposition, DNA-mediated
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0015074 P DNA integration
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
9426 O_BomoSK18485_complete:A_BomoSK_comp14127_c0_seq1
480bp
GO:0003824 F catalytic activity
GO:0005739 C mitochondrion
GO:0008453 F alanine-glyoxylate transaminase activity
GO:0008483 F transaminase activity
GO:0009436 P glyoxylate catabolic process
GO:0016740 F transferase activity
GO:0019265 P glycine biosynthetic process, by transamination of glyoxylate
GO:0019481 P L-alanine catabolic process, by transamination
GO:0030170 F pyridoxal phosphate binding
GO:0042802 F identical protein binding
GO:0045429 P positive regulation of nitric oxide biosynthetic process
GO:0047305 F (R)-3-amino-2-methylpropionate-pyruvate transaminase activity
9427 O_BomoSK18486_complete:A_BomoSK_comp14127_c0_seq1
101bp
9428 O_BomoSK18487_complete:A_BomoSK_comp14127_c0_seq2
481bp
GO:0003824 F catalytic activity
GO:0005739 C mitochondrion
GO:0005759 C mitochondrial matrix
GO:0008453 F alanine-glyoxylate transaminase activity
GO:0008483 F transaminase activity
GO:0009436 P glyoxylate catabolic process
GO:0016223 F beta-alanine-pyruvate transaminase activity
GO:0016740 F transferase activity
GO:0019265 P glycine biosynthetic process, by transamination of glyoxylate
GO:0019481 P L-alanine catabolic process, by transamination
GO:0030170 F pyridoxal phosphate binding
GO:0042802 F identical protein binding
GO:0045429 P positive regulation of nitric oxide biosynthetic process
GO:0046487 P glyoxylate metabolic process
GO:0047305 F (R)-3-amino-2-methylpropionate-pyruvate transaminase activity
9429 O_BomoSK18488_complete:A_BomoSK_comp14127_c0_seq2
128bp
9430 O_BomoSK18489_complete:A_BomoSK_comp14127_c0_seq5
480bp
GO:0003824 F catalytic activity
GO:0005739 C mitochondrion
GO:0005759 C mitochondrial matrix
GO:0008453 F alanine-glyoxylate transaminase activity
GO:0008483 F transaminase activity
GO:0009436 P glyoxylate catabolic process
GO:0016223 F beta-alanine-pyruvate transaminase activity
GO:0016740 F transferase activity
GO:0019265 P glycine biosynthetic process, by transamination of glyoxylate
GO:0019481 P L-alanine catabolic process, by transamination
GO:0030170 F pyridoxal phosphate binding
GO:0042802 F identical protein binding
GO:0045429 P positive regulation of nitric oxide biosynthetic process
GO:0046487 P glyoxylate metabolic process
GO:0047305 F (R)-3-amino-2-methylpropionate-pyruvate transaminase activity
9431 O_BomoSK1848_internal:A_BomoSK_comp4654_c0_seq1
132bp
 PREDICTED:_splicing_factor,_arginine/serine-rich_15_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005681 C spliceosomal complex
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0016363 C nuclear matrix
GO:0043175 F RNA polymerase core enzyme binding
9432 O_BomoSK18490_5prime_partial:A_BomoSK_comp14127_c0_seq5
175bp
9433 O_BomoSK18491_complete:A_BomoSK_comp14127_c0_seq6
480bp
GO:0003824 F catalytic activity
GO:0005739 C mitochondrion
GO:0005759 C mitochondrial matrix
GO:0008453 F alanine-glyoxylate transaminase activity
GO:0008483 F transaminase activity
GO:0009436 P glyoxylate catabolic process
GO:0016223 F beta-alanine-pyruvate transaminase activity
GO:0016740 F transferase activity
GO:0019265 P glycine biosynthetic process, by transamination of glyoxylate
GO:0019481 P L-alanine catabolic process, by transamination
GO:0030170 F pyridoxal phosphate binding
GO:0042802 F identical protein binding
GO:0045429 P positive regulation of nitric oxide biosynthetic process
GO:0046487 P glyoxylate metabolic process
GO:0047305 F (R)-3-amino-2-methylpropionate-pyruvate transaminase activity
9434 O_BomoSK18492_complete:A_BomoSK_comp14127_c0_seq6
128bp
9435 O_BomoSK18493_complete:A_BomoSK_comp14127_c0_seq7
481bp
GO:0003824 F catalytic activity
GO:0005739 C mitochondrion
GO:0005759 C mitochondrial matrix
GO:0008453 F alanine-glyoxylate transaminase activity
GO:0008483 F transaminase activity
GO:0009436 P glyoxylate catabolic process
GO:0016223 F beta-alanine-pyruvate transaminase activity
GO:0016740 F transferase activity
GO:0019265 P glycine biosynthetic process, by transamination of glyoxylate
GO:0019481 P L-alanine catabolic process, by transamination
GO:0030170 F pyridoxal phosphate binding
GO:0042802 F identical protein binding
GO:0045429 P positive regulation of nitric oxide biosynthetic process
GO:0046487 P glyoxylate metabolic process
GO:0047305 F (R)-3-amino-2-methylpropionate-pyruvate transaminase activity
9436 O_BomoSK18494_5prime_partial:A_BomoSK_comp14127_c0_seq7
175bp
9437 O_BomoSK18495_complete:A_BomoSK_comp14127_c0_seq8
480bp
GO:0003824 F catalytic activity
GO:0005739 C mitochondrion
GO:0008453 F alanine-glyoxylate transaminase activity
GO:0008483 F transaminase activity
GO:0009436 P glyoxylate catabolic process
GO:0016740 F transferase activity
GO:0019265 P glycine biosynthetic process, by transamination of glyoxylate
GO:0019481 P L-alanine catabolic process, by transamination
GO:0030170 F pyridoxal phosphate binding
GO:0042802 F identical protein binding
GO:0045429 P positive regulation of nitric oxide biosynthetic process
GO:0047305 F (R)-3-amino-2-methylpropionate-pyruvate transaminase activity
9438 O_BomoSK18496_5prime_partial:A_BomoSK_comp14127_c0_seq8
148bp
9439 O_BomoSK18497_complete:A_BomoSK_comp14128_c1_seq1
154bp
GO:0005576 C extracellular region
9440 O_BomoSK18498_3prime_partial:A_BomoSK_comp14128_c1_seq2
156bp
GO:0005576 C extracellular region
9441 O_BomoSK18499_complete:A_BomoSK_comp14128_c1_seq4
188bp
GO:0005576 C extracellular region
9442 O_BomoSK1849_internal:A_BomoSK_comp4654_c0_seq1
132bp
9443 O_BomoSK184_5prime_partial:A_BomoSK_comp623_c0_seq1
229bp
 PREDICTED:_zinc_finger_protein_OZF-like_[Bombyx_mori]
GO:0001702 P gastrulation with mouth forming second
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0007275 P multicellular organism development
GO:0046872 F metal ion binding
9444 O_BomoSK18500_complete:A_BomoSK_comp14128_c1_seq6
154bp
GO:0005576 C extracellular region
9445 O_BomoSK18501_5prime_partial:A_BomoSK_comp14128_c1_seq7
183bp
9446 O_BomoSK18502_complete:A_BomoSK_comp14128_c1_seq7
148bp
9447 O_BomoSK18503_5prime_partial:A_BomoSK_comp14128_c1_seq7
114bp
9448 O_BomoSK18504_complete:A_BomoSK_comp14128_c1_seq7
107bp
9449 O_BomoSK18505_5prime_partial:A_BomoSK_comp14128_c1_seq9
183bp
9450 O_BomoSK18506_complete:A_BomoSK_comp14128_c1_seq9
148bp
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