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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
8911 O_BomoSK18020_complete:A_BomoSK_comp14071_c0_seq44
296bp
8912 O_BomoSK18021_complete:A_BomoSK_comp14071_c0_seq44
241bp
GO:0000922 C spindle pole
GO:0004843 F thiol-dependent deubiquitinase
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0006281 P DNA repair
GO:0006302 P double-strand break repair
GO:0006508 P proteolysis
GO:0006974 P cellular response to DNA damage stimulus
GO:0007049 P cell cycle
GO:0007067 P mitotic cell cycle
GO:0008233 F peptidase activity
GO:0008237 F metallopeptidase activity
GO:0010212 P response to ionizing radiation
GO:0016568 P chromatin organization
GO:0016787 F hydrolase activity
GO:0031572 P mitotic G2 DNA damage checkpoint signaling
GO:0031593 F polyubiquitin modification-dependent protein binding
GO:0045739 P positive regulation of DNA repair
GO:0046872 F metal ion binding
GO:0051301 P cell division
GO:0070531 C BRCA1-A complex
GO:0070536 P protein K63-linked deubiquitination
GO:0070537 P histone H2A K63-linked deubiquitination
GO:0070552 C BRISC complex
8913 O_BomoSK18022_complete:A_BomoSK_comp14071_c0_seq44
122bp
8914 O_BomoSK18023_complete:A_BomoSK_comp14071_c0_seq45
241bp
GO:0000922 C spindle pole
GO:0004843 F thiol-dependent deubiquitinase
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0006281 P DNA repair
GO:0006302 P double-strand break repair
GO:0006508 P proteolysis
GO:0006974 P cellular response to DNA damage stimulus
GO:0007049 P cell cycle
GO:0007067 P mitotic cell cycle
GO:0008233 F peptidase activity
GO:0008237 F metallopeptidase activity
GO:0010212 P response to ionizing radiation
GO:0016568 P chromatin organization
GO:0016787 F hydrolase activity
GO:0031572 P mitotic G2 DNA damage checkpoint signaling
GO:0031593 F polyubiquitin modification-dependent protein binding
GO:0045739 P positive regulation of DNA repair
GO:0046872 F metal ion binding
GO:0051301 P cell division
GO:0070531 C BRCA1-A complex
GO:0070536 P protein K63-linked deubiquitination
GO:0070537 P histone H2A K63-linked deubiquitination
GO:0070552 C BRISC complex
8915 O_BomoSK18024_5prime_partial:A_BomoSK_comp14071_c0_seq45
145bp
8916 O_BomoSK18025_complete:A_BomoSK_comp14071_c0_seq46
117bp
8917 O_BomoSK18026_5prime_partial:A_BomoSK_comp14071_c0_seq46
102bp
8918 O_BomoSK18027_complete:A_BomoSK_comp14071_c0_seq47
265bp
GO:0003674 F molecular_function
GO:0004843 F thiol-dependent deubiquitinase
GO:0005575 C cellular_component
GO:0005634 C nucleus
GO:0006302 P double-strand break repair
GO:0006508 P proteolysis
GO:0008150 P biological_process
GO:0008233 F peptidase activity
GO:0008237 F metallopeptidase activity
GO:0010212 P response to ionizing radiation
GO:0016787 F hydrolase activity
GO:0031572 P mitotic G2 DNA damage checkpoint signaling
GO:0031593 F polyubiquitin modification-dependent protein binding
GO:0045739 P positive regulation of DNA repair
GO:0046872 F metal ion binding
GO:0070531 C BRCA1-A complex
GO:0070536 P protein K63-linked deubiquitination
GO:0070537 P histone H2A K63-linked deubiquitination
GO:0070552 C BRISC complex
8919 O_BomoSK18028_complete:A_BomoSK_comp14071_c0_seq47
240bp
8920 O_BomoSK18029_complete:A_BomoSK_comp14071_c0_seq47
117bp
8921 O_BomoSK1802_complete:A_BomoSK_comp4598_c1_seq1
444bp
 PREDICTED:_ankyrin_repeat_domain-containing_protein_13C-B_[Amyelois_transitella]
GO:0005102 F signaling receptor binding
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0006621 P protein retention in ER lumen
GO:0010869 P obsolete regulation of receptor biosynthetic process
GO:0016020 C membrane
GO:0048471 C perinuclear region of cytoplasm
GO:2000209 P regulation of anoikis
8922 O_BomoSK18030_complete:A_BomoSK_comp14071_c0_seq48
265bp
GO:0003674 F molecular_function
GO:0004843 F thiol-dependent deubiquitinase
GO:0005575 C cellular_component
GO:0005634 C nucleus
GO:0006302 P double-strand break repair
GO:0006508 P proteolysis
GO:0008150 P biological_process
GO:0008233 F peptidase activity
GO:0008237 F metallopeptidase activity
GO:0010212 P response to ionizing radiation
GO:0016787 F hydrolase activity
GO:0031572 P mitotic G2 DNA damage checkpoint signaling
GO:0031593 F polyubiquitin modification-dependent protein binding
GO:0045739 P positive regulation of DNA repair
GO:0046872 F metal ion binding
GO:0070531 C BRCA1-A complex
GO:0070536 P protein K63-linked deubiquitination
GO:0070537 P histone H2A K63-linked deubiquitination
GO:0070552 C BRISC complex
8923 O_BomoSK18031_complete:A_BomoSK_comp14071_c0_seq48
207bp
8924 O_BomoSK18032_complete:A_BomoSK_comp14071_c0_seq48
156bp
8925 O_BomoSK18033_complete:A_BomoSK_comp14071_c0_seq49
265bp
GO:0003674 F molecular_function
GO:0004843 F thiol-dependent deubiquitinase
GO:0005575 C cellular_component
GO:0005634 C nucleus
GO:0006302 P double-strand break repair
GO:0006508 P proteolysis
GO:0008150 P biological_process
GO:0008233 F peptidase activity
GO:0008237 F metallopeptidase activity
GO:0010212 P response to ionizing radiation
GO:0016787 F hydrolase activity
GO:0031572 P mitotic G2 DNA damage checkpoint signaling
GO:0031593 F polyubiquitin modification-dependent protein binding
GO:0045739 P positive regulation of DNA repair
GO:0046872 F metal ion binding
GO:0070531 C BRCA1-A complex
GO:0070536 P protein K63-linked deubiquitination
GO:0070537 P histone H2A K63-linked deubiquitination
GO:0070552 C BRISC complex
8926 O_BomoSK18034_complete:A_BomoSK_comp14071_c0_seq49
156bp
8927 O_BomoSK18035_complete:A_BomoSK_comp14071_c0_seq49
156bp
8928 O_BomoSK18036_complete:A_BomoSK_comp14072_c0_seq1
1793bp
8929 O_BomoSK18037_complete:A_BomoSK_comp14072_c0_seq1
100bp
8930 O_BomoSK18038_3prime_partial:A_BomoSK_comp14072_c0_seq2
425bp
8931 O_BomoSK18039_complete:A_BomoSK_comp14072_c0_seq3
1793bp
8932 O_BomoSK1803_complete:A_BomoSK_comp4599_c0_seq1
493bp
 PREDICTED:_uncharacterized_protein_LOC101737775_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0005739 C mitochondrion
GO:0008289 F lipid binding
GO:1903955 P positive regulation of protein targeting to mitochondrion
8933 O_BomoSK18040_complete:A_BomoSK_comp14072_c0_seq3
100bp
8934 O_BomoSK18041_3prime_partial:A_BomoSK_comp14072_c0_seq4
425bp
8935 O_BomoSK18042_complete:A_BomoSK_comp14073_c0_seq1
1738bp
GO:0004721 F phosphoprotein phosphatase activity
GO:0004725 F protein tyrosine phosphatase activity
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005768 C endosome
GO:0005769 C early endosome
GO:0005856 C cytoskeleton
GO:0005929 C cilium
GO:0006470 P protein dephosphorylation
GO:0006810 P transport
GO:0010633 P negative regulation of epithelial cell migration
GO:0015031 P protein transport
GO:0016023 C cytoplasmic vesicle
GO:0016311 P dephosphorylation
GO:0016787 F hydrolase activity
GO:0016791 F phosphatase activity
GO:0019901 F protein kinase binding
GO:0030030 P cell projection organization
GO:0030334 P regulation of cell migration
GO:0031410 C cytoplasmic vesicle
GO:0035335 P peptidyl-tyrosine dephosphorylation
GO:0036064 C ciliary basal body
GO:0042995 C cell projection
GO:0043162 P ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway
GO:0060271 P cilium assembly
GO:0070062 C extracellular exosome
GO:1903387 P positive regulation of homophilic cell adhesion
GO:1903393 P positive regulation of adherens junction organization
GO:2000643 P positive regulation of early endosome to late endosome transport
8936 O_BomoSK18043_complete:A_BomoSK_comp14073_c0_seq1
137bp
8937 O_BomoSK18044_complete:A_BomoSK_comp14073_c0_seq1
115bp
8938 O_BomoSK18045_complete:A_BomoSK_comp14073_c0_seq2
1247bp
GO:0004721 F phosphoprotein phosphatase activity
GO:0004725 F protein tyrosine phosphatase activity
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005768 C endosome
GO:0005769 C early endosome
GO:0005856 C cytoskeleton
GO:0005929 C cilium
GO:0006470 P protein dephosphorylation
GO:0006810 P transport
GO:0010633 P negative regulation of epithelial cell migration
GO:0015031 P protein transport
GO:0016023 C cytoplasmic vesicle
GO:0016311 P dephosphorylation
GO:0016787 F hydrolase activity
GO:0016791 F phosphatase activity
GO:0019901 F protein kinase binding
GO:0030030 P cell projection organization
GO:0030334 P regulation of cell migration
GO:0031410 C cytoplasmic vesicle
GO:0035335 P peptidyl-tyrosine dephosphorylation
GO:0036064 C ciliary basal body
GO:0042995 C cell projection
GO:0043162 P ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway
GO:0060271 P cilium assembly
GO:0070062 C extracellular exosome
GO:1903387 P positive regulation of homophilic cell adhesion
GO:1903393 P positive regulation of adherens junction organization
GO:2000643 P positive regulation of early endosome to late endosome transport
8939 O_BomoSK18046_5prime_partial:A_BomoSK_comp14073_c0_seq2
206bp
8940 O_BomoSK18047_complete:A_BomoSK_comp14073_c0_seq2
137bp
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