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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
8881 O_BomoSK17995_complete:A_BomoSK_comp14071_c0_seq31
283bp
8882 O_BomoSK17996_complete:A_BomoSK_comp14071_c0_seq31
265bp
GO:0003674 F molecular_function
GO:0004843 F thiol-dependent deubiquitinase
GO:0005575 C cellular_component
GO:0005634 C nucleus
GO:0006302 P double-strand break repair
GO:0006508 P proteolysis
GO:0008150 P biological_process
GO:0008233 F peptidase activity
GO:0008237 F metallopeptidase activity
GO:0010212 P response to ionizing radiation
GO:0016787 F hydrolase activity
GO:0031572 P mitotic G2 DNA damage checkpoint signaling
GO:0031593 F polyubiquitin modification-dependent protein binding
GO:0045739 P positive regulation of DNA repair
GO:0046872 F metal ion binding
GO:0070531 C BRCA1-A complex
GO:0070536 P protein K63-linked deubiquitination
GO:0070537 P histone H2A K63-linked deubiquitination
GO:0070552 C BRISC complex
8883 O_BomoSK17997_5prime_partial:A_BomoSK_comp14071_c0_seq32
209bp
8884 O_BomoSK17998_complete:A_BomoSK_comp14071_c0_seq32
122bp
8885 O_BomoSK17999_complete:A_BomoSK_comp14071_c0_seq33
241bp
GO:0000922 C spindle pole
GO:0004843 F thiol-dependent deubiquitinase
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0006281 P DNA repair
GO:0006302 P double-strand break repair
GO:0006508 P proteolysis
GO:0006974 P cellular response to DNA damage stimulus
GO:0007049 P cell cycle
GO:0007067 P mitotic cell cycle
GO:0008233 F peptidase activity
GO:0008237 F metallopeptidase activity
GO:0010212 P response to ionizing radiation
GO:0016568 P chromatin organization
GO:0016787 F hydrolase activity
GO:0031572 P mitotic G2 DNA damage checkpoint signaling
GO:0031593 F polyubiquitin modification-dependent protein binding
GO:0045739 P positive regulation of DNA repair
GO:0046872 F metal ion binding
GO:0051301 P cell division
GO:0070531 C BRCA1-A complex
GO:0070536 P protein K63-linked deubiquitination
GO:0070537 P histone H2A K63-linked deubiquitination
GO:0070552 C BRISC complex
8886 O_BomoSK1799_internal:A_BomoSK_comp4596_c0_seq2
297bp
 PREDICTED:_pyridoxal-dependent_decarboxylase_domain-containing_protein_1_isoform_X1_[Bombyx_mori]
GO:0003824 F catalytic activity
GO:0016829 F lyase activity
GO:0016831 F carboxy-lyase activity
GO:0019752 P carboxylic acid metabolic process
GO:0030170 F pyridoxal phosphate binding
8887 O_BomoSK179_5prime_partial:A_BomoSK_comp605_c0_seq1
293bp
 PREDICTED:_hikaru_genki_isoform_X1_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005576 C extracellular region
GO:0007275 P multicellular organism development
GO:0007399 P nervous system development
GO:0008039 P synaptic target recognition
GO:0030154 P cell differentiation
GO:0043025 C neuronal cell body
GO:0043083 C synaptic cleft
8888 O_BomoSK17_3prime_partial:A_BomoSK_comp49_c1_seq1
109bp
 PREDICTED:_uncharacterized_protein_LOC105841993_[Bombyx_mori]
8889 O_BomoSK18000_complete:A_BomoSK_comp14071_c0_seq33
189bp
8890 O_BomoSK18001_complete:A_BomoSK_comp14071_c0_seq33
117bp
8891 O_BomoSK18002_complete:A_BomoSK_comp14071_c0_seq35
156bp
8892 O_BomoSK18003_5prime_partial:A_BomoSK_comp14071_c0_seq35
102bp
8893 O_BomoSK18004_complete:A_BomoSK_comp14071_c0_seq36
265bp
GO:0003674 F molecular_function
GO:0004843 F thiol-dependent deubiquitinase
GO:0005575 C cellular_component
GO:0005634 C nucleus
GO:0006302 P double-strand break repair
GO:0006508 P proteolysis
GO:0008150 P biological_process
GO:0008233 F peptidase activity
GO:0008237 F metallopeptidase activity
GO:0010212 P response to ionizing radiation
GO:0016787 F hydrolase activity
GO:0031572 P mitotic G2 DNA damage checkpoint signaling
GO:0031593 F polyubiquitin modification-dependent protein binding
GO:0045739 P positive regulation of DNA repair
GO:0046872 F metal ion binding
GO:0070531 C BRCA1-A complex
GO:0070536 P protein K63-linked deubiquitination
GO:0070537 P histone H2A K63-linked deubiquitination
GO:0070552 C BRISC complex
8894 O_BomoSK18005_complete:A_BomoSK_comp14071_c0_seq36
187bp
8895 O_BomoSK18006_complete:A_BomoSK_comp14071_c0_seq36
122bp
8896 O_BomoSK18007_complete:A_BomoSK_comp14071_c0_seq37
265bp
GO:0003674 F molecular_function
GO:0004843 F thiol-dependent deubiquitinase
GO:0005575 C cellular_component
GO:0005634 C nucleus
GO:0006302 P double-strand break repair
GO:0006508 P proteolysis
GO:0008150 P biological_process
GO:0008233 F peptidase activity
GO:0008237 F metallopeptidase activity
GO:0010212 P response to ionizing radiation
GO:0016787 F hydrolase activity
GO:0031572 P mitotic G2 DNA damage checkpoint signaling
GO:0031593 F polyubiquitin modification-dependent protein binding
GO:0045739 P positive regulation of DNA repair
GO:0046872 F metal ion binding
GO:0070531 C BRCA1-A complex
GO:0070536 P protein K63-linked deubiquitination
GO:0070537 P histone H2A K63-linked deubiquitination
GO:0070552 C BRISC complex
8897 O_BomoSK18008_complete:A_BomoSK_comp14071_c0_seq37
156bp
8898 O_BomoSK18009_complete:A_BomoSK_comp14071_c0_seq37
127bp
8899 O_BomoSK1800_3prime_partial:A_BomoSK_comp4596_c0_seq3
278bp
 PREDICTED:_pyridoxal-dependent_decarboxylase_domain-containing_protein_1_isoform_X2_[Bombyx_mori]
GO:0003824 F catalytic activity
GO:0016829 F lyase activity
GO:0016831 F carboxy-lyase activity
GO:0019752 P carboxylic acid metabolic process
GO:0030170 F pyridoxal phosphate binding
8900 O_BomoSK18010_complete:A_BomoSK_comp14071_c0_seq38
156bp
8901 O_BomoSK18011_complete:A_BomoSK_comp14071_c0_seq40
241bp
GO:0000922 C spindle pole
GO:0004843 F thiol-dependent deubiquitinase
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0006281 P DNA repair
GO:0006302 P double-strand break repair
GO:0006508 P proteolysis
GO:0006974 P cellular response to DNA damage stimulus
GO:0007049 P cell cycle
GO:0007067 P mitotic cell cycle
GO:0008233 F peptidase activity
GO:0008237 F metallopeptidase activity
GO:0010212 P response to ionizing radiation
GO:0016568 P chromatin organization
GO:0016787 F hydrolase activity
GO:0031572 P mitotic G2 DNA damage checkpoint signaling
GO:0031593 F polyubiquitin modification-dependent protein binding
GO:0045739 P positive regulation of DNA repair
GO:0046872 F metal ion binding
GO:0051301 P cell division
GO:0070531 C BRCA1-A complex
GO:0070536 P protein K63-linked deubiquitination
GO:0070537 P histone H2A K63-linked deubiquitination
GO:0070552 C BRISC complex
8902 O_BomoSK18012_complete:A_BomoSK_comp14071_c0_seq40
117bp
8903 O_BomoSK18013_complete:A_BomoSK_comp14071_c0_seq41
241bp
GO:0000922 C spindle pole
GO:0004843 F thiol-dependent deubiquitinase
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0006281 P DNA repair
GO:0006302 P double-strand break repair
GO:0006508 P proteolysis
GO:0006974 P cellular response to DNA damage stimulus
GO:0007049 P cell cycle
GO:0007067 P mitotic cell cycle
GO:0008233 F peptidase activity
GO:0008237 F metallopeptidase activity
GO:0010212 P response to ionizing radiation
GO:0016568 P chromatin organization
GO:0016787 F hydrolase activity
GO:0031572 P mitotic G2 DNA damage checkpoint signaling
GO:0031593 F polyubiquitin modification-dependent protein binding
GO:0045739 P positive regulation of DNA repair
GO:0046872 F metal ion binding
GO:0051301 P cell division
GO:0070531 C BRCA1-A complex
GO:0070536 P protein K63-linked deubiquitination
GO:0070537 P histone H2A K63-linked deubiquitination
GO:0070552 C BRISC complex
8904 O_BomoSK18014_complete:A_BomoSK_comp14071_c0_seq41
127bp
8905 O_BomoSK18015_complete:A_BomoSK_comp14071_c0_seq42
265bp
GO:0003674 F molecular_function
GO:0004843 F thiol-dependent deubiquitinase
GO:0005575 C cellular_component
GO:0005634 C nucleus
GO:0006302 P double-strand break repair
GO:0006508 P proteolysis
GO:0008150 P biological_process
GO:0008233 F peptidase activity
GO:0008237 F metallopeptidase activity
GO:0010212 P response to ionizing radiation
GO:0016787 F hydrolase activity
GO:0031572 P mitotic G2 DNA damage checkpoint signaling
GO:0031593 F polyubiquitin modification-dependent protein binding
GO:0045739 P positive regulation of DNA repair
GO:0046872 F metal ion binding
GO:0070531 C BRCA1-A complex
GO:0070536 P protein K63-linked deubiquitination
GO:0070537 P histone H2A K63-linked deubiquitination
GO:0070552 C BRISC complex
8906 O_BomoSK18016_complete:A_BomoSK_comp14071_c0_seq42
207bp
8907 O_BomoSK18017_complete:A_BomoSK_comp14071_c0_seq42
117bp
8908 O_BomoSK18018_complete:A_BomoSK_comp14071_c0_seq43
241bp
GO:0000922 C spindle pole
GO:0004843 F thiol-dependent deubiquitinase
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0006281 P DNA repair
GO:0006302 P double-strand break repair
GO:0006508 P proteolysis
GO:0006974 P cellular response to DNA damage stimulus
GO:0007049 P cell cycle
GO:0007067 P mitotic cell cycle
GO:0008233 F peptidase activity
GO:0008237 F metallopeptidase activity
GO:0010212 P response to ionizing radiation
GO:0016568 P chromatin organization
GO:0016787 F hydrolase activity
GO:0031572 P mitotic G2 DNA damage checkpoint signaling
GO:0031593 F polyubiquitin modification-dependent protein binding
GO:0045739 P positive regulation of DNA repair
GO:0046872 F metal ion binding
GO:0051301 P cell division
GO:0070531 C BRCA1-A complex
GO:0070536 P protein K63-linked deubiquitination
GO:0070537 P histone H2A K63-linked deubiquitination
GO:0070552 C BRISC complex
8909 O_BomoSK18019_complete:A_BomoSK_comp14071_c0_seq43
156bp
8910 O_BomoSK1801_internal:A_BomoSK_comp4597_c0_seq1
223bp
 PREDICTED:_leucine-rich_repeat_serine/threonine-protein_kinase_1_[Bombyx_mori]
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