Search ORF from Assembled RNA-Seq

No.	Name Length	Chromosome No./Scaffold Id Scaffold Length	BLAST (vs nr)	Gene ontology
871	O_BomoSK10785_complete:A_BomoSK_comp12363_c0_seq1 109bp	Bomo_Chr4
872	O_BomoSK10786_internal:A_BomoSK_comp12363_c0_seq2 572bp	Bomo_Chr4	PREDICTED:_patronin_isoform_X6_[Bombyx_mori]	GO:0000022 P mitotic spindle elongation GO:0005516 F calmodulin binding GO:0005737 C cytoplasm GO:0005813 C centrosome GO:0005815 C microtubule organizing center GO:0005819 C spindle GO:0005856 C cytoskeleton GO:0005874 C microtubule GO:0007026 P negative regulation of microtubule depolymerization GO:0007049 P cell cycle GO:0008017 F microtubule binding GO:0030496 C midbody GO:0030507 F spectrin binding GO:0031175 P neuron projection development GO:0051011 F microtubule minus-end binding GO:0051013 P microtubule severing
873	O_BomoSK10787_3prime_partial:A_BomoSK_comp12363_c0_seq2 169bp	Bomo_Chr4
874	O_BomoSK10788_complete:A_BomoSK_comp12363_c0_seq2 160bp	Bomo_Chr4
875	O_BomoSK10789_5prime_partial:A_BomoSK_comp12363_c0_seq2 125bp	Bomo_Chr4	Cytosine-specific_methyltransferase_(fragment)_[Capnocytophaga_canimorsus]
876	O_BomoSK1078_3prime_partial:A_BomoSK_comp3865_c0_seq1 559bp	Bomo_Chr18	PREDICTED:_protein_Smaug_[Amyelois_transitella]	GO:0003723 F RNA binding GO:0005737 C cytoplasm GO:0006355 P regulation of transcription, DNA-templated GO:0006417 P regulation of translation GO:0030054 C cell junction GO:0030425 C dendrite GO:0042995 C cell projection GO:0043005 C neuron projection GO:0045202 C synapse
877	O_BomoSK10790_internal:A_BomoSK_comp12363_c0_seq3 552bp	Bomo_Chr4	PREDICTED:_patronin_isoform_X3_[Bombyx_mori]	GO:0000022 P mitotic spindle elongation GO:0005516 F calmodulin binding GO:0005737 C cytoplasm GO:0005813 C centrosome GO:0005815 C microtubule organizing center GO:0005819 C spindle GO:0005856 C cytoskeleton GO:0005874 C microtubule GO:0007026 P negative regulation of microtubule depolymerization GO:0007049 P cell cycle GO:0008017 F microtubule binding GO:0030496 C midbody GO:0030507 F spectrin binding GO:0031175 P neuron projection development GO:0051011 F microtubule minus-end binding GO:0051013 P microtubule severing
878	O_BomoSK10791_3prime_partial:A_BomoSK_comp12363_c0_seq3 169bp	Bomo_Chr4
879	O_BomoSK10792_complete:A_BomoSK_comp12363_c0_seq3 140bp	Bomo_Chr4
880	O_BomoSK10793_5prime_partial:A_BomoSK_comp12363_c0_seq3 125bp	Bomo_Chr4	Cytosine-specific_methyltransferase_(fragment)_[Capnocytophaga_canimorsus]
881	O_BomoSK10794_complete:A_BomoSK_comp12364_c0_seq1 516bp	Bomo_Chr4	PREDICTED:_protein_msta,_isoform_B-like_isoform_X2_[Bombyx_mori]	GO:0008168 F methyltransferase activity GO:0010629 P negative regulation of gene expression GO:0016740 F transferase activity GO:0032259 P methylation GO:0042826 F histone deacetylase binding
882	O_BomoSK10795_5prime_partial:A_BomoSK_comp12364_c0_seq2 367bp	Bomo_Chr4	PREDICTED:_protein_msta,_isoform_A-like_isoform_X1_[Bombyx_mori]	GO:0008168 F methyltransferase activity GO:0010629 P negative regulation of gene expression GO:0016740 F transferase activity GO:0032259 P methylation GO:0042826 F histone deacetylase binding
883	O_BomoSK10796_5prime_partial:A_BomoSK_comp12364_c0_seq3 471bp	Bomo_Chr4	PREDICTED:_protein_msta,_isoform_A-like_isoform_X1_[Bombyx_mori]	GO:0008168 F methyltransferase activity GO:0010629 P negative regulation of gene expression GO:0016740 F transferase activity GO:0032259 P methylation GO:0042826 F histone deacetylase binding
884	O_BomoSK10797_5prime_partial:A_BomoSK_comp12366_c0_seq2 247bp	Bomo_Chr6	PREDICTED:_scavenger_receptor_class_B_member_1-like_isoform_X3_[Bombyx_mori]	GO:0004872 F signaling receptor activity GO:0005764 C lysosome GO:0005765 C lysosomal membrane GO:0005925 C focal adhesion GO:0006622 P protein targeting to lysosome GO:0016020 C membrane GO:0016021 C integral component of membrane GO:0019899 F enzyme binding GO:0043202 C lysosomal lumen GO:0070062 C extracellular exosome
885	O_BomoSK10798_3prime_partial:A_BomoSK_comp12366_c0_seq2 118bp	Bomo_Chr6	hypothetical_protein_[Streptomyces_sp._AA4]
886	O_BomoSK10799_complete:A_BomoSK_comp12367_c0_seq1 334bp	Bomo_Chr20	PREDICTED:_glutamate--cysteine_ligase_regulatory_subunit_[Papilio_polytes]	GO:0004357 F glutamate-cysteine ligase activity GO:0006534 P cysteine metabolic process GO:0006536 P glutamate metabolic process GO:0006749 P glutathione metabolic process GO:0006750 P glutathione biosynthetic process GO:0006979 P response to oxidative stress GO:0007568 P aging GO:0007584 P response to nutrient GO:0008637 P apoptotic mitochondrial changes GO:0014823 P response to activity GO:0017109 C glutamate-cysteine ligase complex GO:0030234 F enzyme regulator activity GO:0035226 F glutamate-cysteine ligase catalytic subunit binding GO:0035229 P positive regulation of glutamate-cysteine ligase activity GO:0035729 P cellular response to hepatocyte growth factor stimulus GO:0035733 P hepatic stellate cell activation GO:0042493 P response to xenobiotic stimulus GO:0043524 P negative regulation of neuron apoptotic process GO:0044344 P cellular response to fibroblast growth factor stimulus GO:0044752 P response to human chorionic gonadotropin GO:0046982 F protein heterodimerization activity GO:0050880 P blood vessel diameter maintenance GO:0051409 P response to nitrosative stress GO:0051900 P regulation of mitochondrial depolarization GO:0071333 P cellular response to glucose stimulus GO:0071372 P cellular response to follicle-stimulating hormone stimulus GO:0097069 P cellular response to thyroxine stimulus GO:2001237 P negative regulation of extrinsic apoptotic signaling pathway
887	O_BomoSK1079_complete:A_BomoSK_comp3865_c0_seq1 115bp	Bomo_Chr18	chromosomal_replication_initiation_protein_DnaA_[Brevundimonas_sp._DS20]
888	O_BomoSK107_internal:A_BomoSK_comp390_c0_seq1 305bp	Bomo_Chr24	PREDICTED:_uncharacterized_protein_LOC101744544_[Bombyx_mori]
889	O_BomoSK10800_complete:A_BomoSK_comp12368_c0_seq1 388bp	Bomo_Chr14	PREDICTED:_cathepsin_O-like_[Amyelois_transitella]	GO:0004197 F cysteine-type endopeptidase activity GO:0005615 C extracellular space GO:0005764 C lysosome GO:0006508 P proteolysis GO:0008233 F peptidase activity GO:0008234 F cysteine-type peptidase activity GO:0016787 F hydrolase activity GO:0051603 P proteolysis involved in cellular protein catabolic process
890	O_BomoSK10801_internal:A_BomoSK_comp12369_c0_seq1 409bp	Bomo_Chr15	PREDICTED:_E3_ubiquitin-protein_ligase_TRIP12_isoform_X4_[Bombyx_mori]	GO:0004842 F ubiquitin-protein transferase activity GO:0005634 C nucleus GO:0005654 C nucleoplasm GO:0005737 C cytoplasm GO:0006281 P DNA repair GO:0006974 P cellular response to DNA damage stimulus GO:0008270 F zinc ion binding GO:0009790 P embryo development GO:0016567 P protein ubiquitination GO:0016874 F ligase activity GO:0042787 P ubiquitin-dependent protein catabolic process GO:0046966 F thyroid hormone receptor binding GO:1901315 P negative regulation of histone H2A K63-linked ubiquitination GO:2000780 P negative regulation of double-strand break repair
891	O_BomoSK10802_complete:A_BomoSK_comp12369_c0_seq1 102bp	Bomo_Chr15	TIM23_translocase_complex_subunit_Tim44_[Aspergillus_nomius_NRRL_13137]
892	O_BomoSK10803_internal:A_BomoSK_comp12369_c0_seq2 425bp	Bomo_Chr15	PREDICTED:_E3_ubiquitin-protein_ligase_TRIP12_isoform_X2_[Bombyx_mori]	GO:0004842 F ubiquitin-protein transferase activity GO:0005634 C nucleus GO:0005654 C nucleoplasm GO:0005737 C cytoplasm GO:0006281 P DNA repair GO:0006974 P cellular response to DNA damage stimulus GO:0008270 F zinc ion binding GO:0009790 P embryo development GO:0016567 P protein ubiquitination GO:0016874 F ligase activity GO:0042787 P ubiquitin-dependent protein catabolic process GO:1901315 P negative regulation of histone H2A K63-linked ubiquitination GO:2000780 P negative regulation of double-strand break repair
893	O_BomoSK10804_complete:A_BomoSK_comp12369_c0_seq2 102bp	Bomo_Chr15	TIM23_translocase_complex_subunit_Tim44_[Aspergillus_nomius_NRRL_13137]
894	O_BomoSK10805_complete:A_BomoSK_comp12372_c0_seq1 145bp	Bomo_Chr5	PREDICTED:_uncharacterized_protein_LOC101736452_isoform_X2_[Bombyx_mori]
895	O_BomoSK10806_complete:A_BomoSK_comp12372_c0_seq2 245bp	Bomo_Chr5	PREDICTED:_uncharacterized_protein_LOC101736452_isoform_X2_[Bombyx_mori]
896	O_BomoSK10807_complete:A_BomoSK_comp12372_c0_seq2 147bp	Bomo_Chr5	hypothetical_protein_[Nitrincola_lacisaponensis]
897	O_BomoSK10808_complete:A_BomoSK_comp12372_c0_seq3 179bp	Bomo_Chr5	PREDICTED:_uncharacterized_protein_LOC101736452_isoform_X2_[Bombyx_mori]
898	O_BomoSK10809_complete:A_BomoSK_comp12372_c0_seq3 102bp	Bomo_Chr5	hypothetical_protein_[Nitrincola_lacisaponensis]
899	O_BomoSK1080_3prime_partial:A_BomoSK_comp3866_c0_seq1 373bp	Bomo_Chr9	PREDICTED:_dynactin_subunit_4_[Amyelois_transitella]	GO:0005515 F protein binding GO:0005634 C nucleus GO:0005737 C cytoplasm GO:0005813 C centrosome GO:0005815 C microtubule organizing center GO:0005829 C cytosol GO:0005856 C cytoskeleton GO:0005868 C cytoplasmic dynein complex GO:0005869 C dynactin complex GO:0006888 P endoplasmic reticulum to Golgi vesicle-mediated transport GO:0007097 P nuclear migration GO:0019886 P antigen processing and presentation of exogenous peptide antigen via MHC class II GO:0047485 F protein N-terminus binding
900	O_BomoSK10810_complete:A_BomoSK_comp12372_c0_seq4 112bp	Bomo_Chr5	PREDICTED:_uncharacterized_protein_LOC101736452_isoform_X2_[Bombyx_mori]