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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
841 O_BomoSK10758_complete:A_BomoSK_comp12346_c0_seq1
343bp
 PREDICTED:_uncharacterized_protein_LOC101746654_isoform_X1_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0046982 F protein heterodimerization activity
842 O_BomoSK10759_complete:A_BomoSK_comp12346_c0_seq1
153bp
 hypothetical_protein_[Zavarzinella_formosa]
843 O_BomoSK1075_complete:A_BomoSK_comp3860_c0_seq1
108bp
844 O_BomoSK10760_complete:A_BomoSK_comp12346_c0_seq2
343bp
 PREDICTED:_uncharacterized_protein_LOC101746654_isoform_X1_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0046982 F protein heterodimerization activity
845 O_BomoSK10761_complete:A_BomoSK_comp12346_c0_seq2
153bp
 hypothetical_protein_[Zavarzinella_formosa]
846 O_BomoSK10762_complete:A_BomoSK_comp12346_c0_seq3
514bp
 PREDICTED:_uncharacterized_protein_LOC106129367_isoform_X3_[Amyelois_transitella]
GO:0001510 P RNA methylation
GO:0003723 F RNA binding
GO:0008168 F methyltransferase activity
GO:0008171 F O-methyltransferase activity
GO:0008173 F RNA methyltransferase activity
GO:0016740 F transferase activity
GO:0030422 P production of siRNA involved in RNA interference
GO:0031047 P gene silencing by RNA
GO:0032259 P methylation
GO:0034587 P piRNA metabolic process
GO:0035194 P post-transcriptional gene silencing by RNA
GO:0046872 F metal ion binding
847 O_BomoSK10763_complete:A_BomoSK_comp12347_c0_seq1
143bp
 hypothetical_protein_KGM_14584_[Danaus_plexippus]
848 O_BomoSK10764_complete:A_BomoSK_comp12347_c0_seq2
326bp
 hypothetical_protein_KGM_14584_[Danaus_plexippus]
849 O_BomoSK10765_complete:A_BomoSK_comp12348_c0_seq1
589bp
 PREDICTED:_probable_leucine--tRNA_ligase,_mitochondrial_[Amyelois_transitella]
GO:0000166 F nucleotide binding
GO:0002161 F aminoacyl-tRNA editing activity
GO:0004812 F aminoacyl-tRNA ligase activity
GO:0004823 F leucine-tRNA ligase activity
GO:0005524 F ATP binding
GO:0005739 C mitochondrion
GO:0005759 C mitochondrial matrix
GO:0006412 P translation
GO:0006418 P tRNA aminoacylation for protein translation
GO:0006429 P leucyl-tRNA aminoacylation
GO:0006450 P regulation of translational fidelity
GO:0016874 F ligase activity
850 O_BomoSK10766_complete:A_BomoSK_comp12348_c0_seq1
181bp
 PREDICTED:_probable_leucine--tRNA_ligase,_mitochondrial_[Amyelois_transitella]
GO:0000166 F nucleotide binding
GO:0002161 F aminoacyl-tRNA editing activity
GO:0004812 F aminoacyl-tRNA ligase activity
GO:0004823 F leucine-tRNA ligase activity
GO:0005524 F ATP binding
GO:0005739 C mitochondrion
GO:0005759 C mitochondrial matrix
GO:0005829 C cytosol
GO:0006412 P translation
GO:0006418 P tRNA aminoacylation for protein translation
GO:0006429 P leucyl-tRNA aminoacylation
GO:0006450 P regulation of translational fidelity
GO:0016874 F ligase activity
851 O_BomoSK10767_complete:A_BomoSK_comp12349_c0_seq1
712bp
 PREDICTED:_groucho_isoform_X1_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006355 P regulation of transcription, DNA-templated
GO:1900052 P regulation of retinoic acid biosynthetic process
852 O_BomoSK10768_complete:A_BomoSK_comp12349_c0_seq1
105bp
 putative_uncharacterized_protein_[Ruminococcus_sp._CAG:57]
853 O_BomoSK10769_complete:A_BomoSK_comp12349_c0_seq2
717bp
 groucho_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006355 P regulation of transcription, DNA-templated
GO:1900052 P regulation of retinoic acid biosynthetic process
854 O_BomoSK1076_complete:A_BomoSK_comp3862_c0_seq1
264bp
 PREDICTED:_protein_FAM151A_isoform_X2_[Papilio_xuthus]
GO:0016020 C membrane
GO:0016021 C integral component of membrane
855 O_BomoSK10770_complete:A_BomoSK_comp12349_c0_seq2
105bp
 putative_uncharacterized_protein_[Ruminococcus_sp._CAG:57]
856 O_BomoSK10771_complete:A_BomoSK_comp12350_c0_seq1
851bp
 PREDICTED:_ATP-binding_cassette_transporter_subfamily_B_isoform_X1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0005524 F ATP binding
GO:0005739 C mitochondrion
GO:0005741 C mitochondrial outer membrane
GO:0005743 C mitochondrial inner membrane
GO:0005783 C endoplasmic reticulum
GO:0005794 C Golgi apparatus
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0006879 P cellular iron ion homeostasis
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016887 F ATP hydrolysis activity
GO:0042626 F ATPase-coupled transmembrane transporter activity
GO:0055085 P transmembrane transport
857 O_BomoSK10772_complete:A_BomoSK_comp12350_c0_seq1
139bp
 PREDICTED:_rap_guanine_nucleotide_exchange_factor_6-like_isoform_X12_[Cyprinodon_variegatus]
858 O_BomoSK10773_complete:A_BomoSK_comp12351_c1_seq1
244bp
 PREDICTED:_upstream_stimulatory_factor_2_[Plutella_xylostella]
GO:0000430 P regulation of transcription from RNA polymerase II promoter by glucose
GO:0000432 P positive regulation of transcription from RNA polymerase II promoter by glucose
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0003705 F DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0006366 P transcription by RNA polymerase II
GO:0007595 P lactation
GO:0019086 P late viral transcription
GO:0042803 F protein homodimerization activity
GO:0043231 C intracellular membrane-bounded organelle
GO:0043425 F bHLH transcription factor binding
GO:0043565 F sequence-specific DNA binding
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046982 F protein heterodimerization activity
GO:0046983 F protein dimerization activity
GO:0055088 P lipid homeostasis
859 O_BomoSK10774_complete:A_BomoSK_comp12351_c1_seq2
239bp
 PREDICTED:_upstream_stimulatory_factor_2_[Plutella_xylostella]
GO:0000432 P positive regulation of transcription from RNA polymerase II promoter by glucose
GO:0001666 P response to hypoxia
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0003705 F DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005667 C transcription regulator complex
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006366 P transcription by RNA polymerase II
GO:0009411 P response to UV
GO:0019086 P late viral transcription
GO:0019899 F enzyme binding
GO:0019901 F protein kinase binding
GO:0032869 P cellular response to insulin stimulus
GO:0042803 F protein homodimerization activity
GO:0042826 F histone deacetylase binding
GO:0043425 F bHLH transcription factor binding
GO:0043565 F sequence-specific DNA binding
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046982 F protein heterodimerization activity
GO:0046983 F protein dimerization activity
GO:0055088 P lipid homeostasis
860 O_BomoSK10775_complete:A_BomoSK_comp12354_c0_seq1
457bp
 kynurenine_3-monooxygenase_[Bombyx_mori]
GO:0004497 F monooxygenase activity
GO:0004502 F kynurenine 3-monooxygenase activity
GO:0005739 C mitochondrion
GO:0005741 C mitochondrial outer membrane
GO:0006569 P tryptophan catabolic process
GO:0009435 P NAD biosynthetic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016174 F NAD(P)H oxidase H2O2-forming activity
GO:0016491 F oxidoreductase activity
GO:0019363 P pyridine nucleotide biosynthetic process
GO:0019674 P NAD metabolic process
GO:0019805 P quinolinate biosynthetic process
GO:0031966 C mitochondrial membrane
GO:0034354 P 'de novo' NAD biosynthetic process from tryptophan
GO:0043420 P anthranilate metabolic process
GO:0044550 P secondary metabolite biosynthetic process
GO:0050660 F flavin adenine dinucleotide binding
GO:0055114 P obsolete oxidation-reduction process
GO:0070189 P kynurenine metabolic process
GO:0071949 F FAD binding
861 O_BomoSK10776_internal:A_BomoSK_comp12357_c0_seq1
1442bp
 PREDICTED:_unconventional_myosin-XV_isoform_X2_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003774 F cytoskeletal motor activity
GO:0003779 F actin binding
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0007605 P sensory perception of sound
GO:0007626 P locomotory behavior
GO:0008152 P metabolic process
GO:0016459 C myosin complex
GO:0032420 C stereocilium
GO:0032421 C stereocilium bundle
GO:0042472 P inner ear morphogenesis
GO:0042995 C cell projection
GO:0070062 C extracellular exosome
862 O_BomoSK10777_complete:A_BomoSK_comp12357_c0_seq1
161bp
 hypothetical_protein_[Stenotrophomonas_koreensis]
863 O_BomoSK10778_complete:A_BomoSK_comp12358_c0_seq1
128bp
 PREDICTED:_cold_shock_domain-containing_protein_CG9705_[Amyelois_transitella]
GO:0003674 F molecular_function
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0005575 C cellular_component
GO:0006355 P regulation of transcription, DNA-templated
GO:0008150 P biological_process
GO:0048813 P dendrite morphogenesis
864 O_BomoSK10779_3prime_partial:A_BomoSK_comp12361_c0_seq1
251bp
 PREDICTED:_uncharacterized_protein_CG43867_isoform_X5_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0005856 C cytoskeleton
GO:0008150 P biological_process
865 O_BomoSK1077_complete:A_BomoSK_comp3862_c0_seq2
117bp
 PREDICTED:_protein_FAM151A_isoform_X3_[Papilio_xuthus]
GO:0005515 F protein binding
866 O_BomoSK10780_internal:A_BomoSK_comp12361_c0_seq2
357bp
 PREDICTED:_uncharacterized_protein_CG43867_isoform_X8_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0005856 C cytoskeleton
GO:0008150 P biological_process
867 O_BomoSK10781_3prime_partial:A_BomoSK_comp12361_c0_seq3
291bp
 PREDICTED:_uncharacterized_protein_CG43867_isoform_X9_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0005856 C cytoskeleton
GO:0008150 P biological_process
868 O_BomoSK10782_internal:A_BomoSK_comp12361_c0_seq4
317bp
 PREDICTED:_uncharacterized_protein_CG43867_isoform_X5_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0005856 C cytoskeleton
GO:0008150 P biological_process
869 O_BomoSK10783_complete:A_BomoSK_comp12362_c0_seq1
254bp
 PREDICTED:_uncharacterized_protein_C18orf19_homolog_A_isoform_X1_[Papilio_xuthus]
GO:0005739 C mitochondrion
GO:0016020 C membrane
GO:0016021 C integral component of membrane
870 O_BomoSK10784_5prime_partial:A_BomoSK_comp12363_c0_seq1
167bp
 PREDICTED:_patronin_isoform_X3_[Bombyx_mori]
GO:0000226 P microtubule cytoskeleton organization
GO:0005515 F protein binding
GO:0005516 F calmodulin binding
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0005856 C cytoskeleton
GO:0005874 C microtubule
GO:0008017 F microtubule binding
GO:0030507 F spectrin binding
GO:0031175 P neuron projection development
GO:0033043 P regulation of organelle organization
GO:0051011 F microtubule minus-end binding
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