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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
7471 O_BomoSK16725_complete:A_BomoSK_comp13918_c4_seq2
273bp
GO:0005737 C cytoplasm
GO:0005764 C lysosome
GO:0005768 C endosome
GO:0005769 C early endosome
GO:0005770 C late endosome
GO:0005829 C cytosol
GO:0006622 P protein targeting to lysosome
GO:0006810 P transport
GO:0008289 F lipid binding
GO:0008333 P endosome to lysosome transport
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0031313 C extrinsic component of endosome membrane
GO:0031901 C early endosome membrane
GO:0031902 C late endosome membrane
GO:0035091 F phosphatidylinositol binding
GO:0042802 F identical protein binding
GO:0045022 P early endosome to late endosome transport
7472 O_BomoSK16726_5prime_partial:A_BomoSK_comp13919_c0_seq1
615bp
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005681 C spliceosomal complex
GO:0006396 P RNA processing
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0044822 F RNA binding
7473 O_BomoSK16727_complete:A_BomoSK_comp13919_c0_seq2
347bp
GO:0003674 F molecular_function
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005575 C cellular_component
GO:0005634 C nucleus
GO:0005681 C spliceosomal complex
GO:0006396 P RNA processing
GO:0006397 P mRNA processing
GO:0008150 P biological_process
GO:0008380 P RNA splicing
GO:0044822 F RNA binding
7474 O_BomoSK16728_complete:A_BomoSK_comp13919_c0_seq3
347bp
GO:0003674 F molecular_function
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005575 C cellular_component
GO:0005634 C nucleus
GO:0005681 C spliceosomal complex
GO:0006396 P RNA processing
GO:0006397 P mRNA processing
GO:0008150 P biological_process
GO:0008380 P RNA splicing
GO:0044822 F RNA binding
7475 O_BomoSK16729_5prime_partial:A_BomoSK_comp13919_c0_seq3
234bp
7476 O_BomoSK1672_complete:A_BomoSK_comp4484_c0_seq1
134bp
 ABC_transporter_permease_[Propionibacterium_propionicum]
7477 O_BomoSK16730_complete:A_BomoSK_comp13920_c0_seq1
354bp
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006915 P apoptotic process
GO:0006919 P activation of cysteine-type endopeptidase activity involved in apoptotic process
GO:0019899 F enzyme binding
GO:0043065 P positive regulation of apoptotic process
GO:0046872 F metal ion binding
GO:0070062 C extracellular exosome
GO:1901532 P regulation of hematopoietic progenitor cell differentiation
GO:1902035 P positive regulation of hematopoietic stem cell proliferation
7478 O_BomoSK16731_complete:A_BomoSK_comp13920_c0_seq2
121bp
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006915 P apoptotic process
GO:0006919 P activation of cysteine-type endopeptidase activity involved in apoptotic process
GO:0019899 F enzyme binding
GO:0043065 P positive regulation of apoptotic process
GO:0046872 F metal ion binding
GO:0070062 C extracellular exosome
GO:1901532 P regulation of hematopoietic progenitor cell differentiation
GO:1902035 P positive regulation of hematopoietic stem cell proliferation
7479 O_BomoSK16732_complete:A_BomoSK_comp13920_c0_seq3
354bp
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006915 P apoptotic process
GO:0006919 P activation of cysteine-type endopeptidase activity involved in apoptotic process
GO:0019899 F enzyme binding
GO:0043065 P positive regulation of apoptotic process
GO:0046872 F metal ion binding
GO:0070062 C extracellular exosome
GO:1901532 P regulation of hematopoietic progenitor cell differentiation
GO:1902035 P positive regulation of hematopoietic stem cell proliferation
7480 O_BomoSK16733_complete:A_BomoSK_comp13920_c0_seq3
140bp
GO:0016020 C membrane
GO:0016021 C integral component of membrane
7481 O_BomoSK16734_complete:A_BomoSK_comp13920_c0_seq6
140bp
GO:0016020 C membrane
GO:0016021 C integral component of membrane
7482 O_BomoSK16735_complete:A_BomoSK_comp13920_c0_seq7
354bp
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006915 P apoptotic process
GO:0006919 P activation of cysteine-type endopeptidase activity involved in apoptotic process
GO:0019899 F enzyme binding
GO:0043065 P positive regulation of apoptotic process
GO:0046872 F metal ion binding
GO:0070062 C extracellular exosome
GO:1901532 P regulation of hematopoietic progenitor cell differentiation
GO:1902035 P positive regulation of hematopoietic stem cell proliferation
7483 O_BomoSK16736_complete:A_BomoSK_comp13921_c0_seq1
733bp
GO:0003674 F molecular_function
GO:0003824 F catalytic activity
GO:0004497 F monooxygenase activity
GO:0005507 F copper ion binding
GO:0005575 C cellular_component
GO:0005576 C extracellular region
GO:0008150 P biological_process
GO:0016491 F oxidoreductase activity
GO:0016715 F oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced ascorbate as one donor, and incorporation of one atom of oxygen
GO:0046872 F metal ion binding
GO:0055114 P obsolete oxidation-reduction process
7484 O_BomoSK16737_complete:A_BomoSK_comp13921_c0_seq1
209bp
7485 O_BomoSK16738_internal:A_BomoSK_comp13922_c0_seq1
221bp
GO:0005576 C extracellular region
GO:0007275 P multicellular organism development
GO:0042438 P melanin biosynthetic process
GO:0060179 P male mating behavior
7486 O_BomoSK16739_5prime_partial:A_BomoSK_comp13922_c0_seq2
229bp
GO:0005576 C extracellular region
GO:0007275 P multicellular organism development
GO:0042438 P melanin biosynthetic process
GO:0060179 P male mating behavior
7487 O_BomoSK1673_3prime_partial:A_BomoSK_comp4489_c0_seq1
230bp
 PREDICTED:_apoptosis-inducing_factor_1,_mitochondrial-like_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0005739 C mitochondrion
GO:0005758 C mitochondrial intermembrane space
GO:0006915 P apoptotic process
GO:0010623 P programmed cell death involved in cell development
GO:0016491 F oxidoreductase activity
GO:0042775 P mitochondrial ATP synthesis coupled electron transport
GO:0045454 P cell redox homeostasis
GO:0046983 F protein dimerization activity
GO:0050660 F flavin adenine dinucleotide binding
GO:0050832 P defense response to fungus
GO:0055114 P obsolete oxidation-reduction process
7488 O_BomoSK16740_complete:A_BomoSK_comp13923_c0_seq3
158bp
GO:0003674 F molecular_function
GO:0005886 C plasma membrane
GO:0005929 C cilium
GO:0007224 P smoothened signaling pathway
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030030 P cell projection organization
GO:0035869 C ciliary transition zone
GO:0036038 C MKS complex
GO:0042384 P cilium assembly
GO:0042995 C cell projection
GO:0060170 C ciliary membrane
7489 O_BomoSK16741_complete:A_BomoSK_comp13923_c2_seq1
119bp
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0006869 P lipid transport
GO:0017089 F glycolipid transfer activity
GO:0046836 P glycolipid transport
GO:0051861 F glycolipid binding
7490 O_BomoSK16742_complete:A_BomoSK_comp13923_c2_seq2
105bp
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0006869 P lipid transport
GO:0017089 F glycolipid transfer activity
GO:0046836 P glycolipid transport
GO:0051861 F glycolipid binding
7491 O_BomoSK16743_complete:A_BomoSK_comp13923_c2_seq3
112bp
GO:0005737 C cytoplasm
GO:0006810 P transport
GO:0006869 P lipid transport
GO:0017089 F glycolipid transfer activity
GO:0046836 P glycolipid transport
GO:0051861 F glycolipid binding
7492 O_BomoSK16744_complete:A_BomoSK_comp13923_c2_seq5
112bp
GO:0005737 C cytoplasm
GO:0006810 P transport
GO:0006869 P lipid transport
GO:0017089 F glycolipid transfer activity
GO:0046836 P glycolipid transport
GO:0051861 F glycolipid binding
7493 O_BomoSK16745_complete:A_BomoSK_comp13923_c2_seq6
151bp
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0006869 P lipid transport
GO:0017089 F glycolipid transfer activity
GO:0046836 P glycolipid transport
GO:0051861 F glycolipid binding
7494 O_BomoSK16746_complete:A_BomoSK_comp13923_c2_seq8
112bp
GO:0005737 C cytoplasm
GO:0006810 P transport
GO:0006869 P lipid transport
GO:0017089 F glycolipid transfer activity
GO:0046836 P glycolipid transport
GO:0051861 F glycolipid binding
7495 O_BomoSK16747_complete:A_BomoSK_comp13923_c2_seq8
105bp
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0006869 P lipid transport
GO:0017089 F glycolipid transfer activity
GO:0046836 P glycolipid transport
GO:0051861 F glycolipid binding
7496 O_BomoSK16748_complete:A_BomoSK_comp13923_c2_seq10
206bp
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0006869 P lipid transport
GO:0017089 F glycolipid transfer activity
GO:0046836 P glycolipid transport
GO:0051861 F glycolipid binding
7497 O_BomoSK16749_complete:A_BomoSK_comp13923_c2_seq11
174bp
GO:0005737 C cytoplasm
GO:0006810 P transport
GO:0006869 P lipid transport
GO:0017089 F glycolipid transfer activity
GO:0046836 P glycolipid transport
GO:0051861 F glycolipid binding
7498 O_BomoSK1674_5prime_partial:A_BomoSK_comp4489_c0_seq1
145bp
 histidine_kinase_[Burkholderia_sp._E7m39]
7499 O_BomoSK16750_5prime_partial:A_BomoSK_comp13924_c0_seq1
644bp
GO:0006810 P transport
GO:0006869 P lipid transport
GO:0007275 P multicellular organism development
GO:0008152 P metabolic process
GO:0008289 F lipid binding
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016747 F acyltransferase activity, transferring groups other than amino-acyl groups
7500 O_BomoSK16751_5prime_partial:A_BomoSK_comp13924_c0_seq2
501bp
GO:0006810 P transport
GO:0006869 P lipid transport
GO:0007275 P multicellular organism development
GO:0008152 P metabolic process
GO:0008289 F lipid binding
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016747 F acyltransferase activity, transferring groups other than amino-acyl groups
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