Search ORF from Assembled RNA-Seq

No.	Name Length	Chromosome No./Scaffold Id Scaffold Length	BLAST (vs nr)	Gene ontology
7441	O_BomoSK16699_complete:A_BomoSK_comp13913_c0_seq3 104bp	Bomo_Chr9
7442	O_BomoSK1669_complete:A_BomoSK_comp4483_c0_seq1 616bp	Bomo_Chr9	PREDICTED:_CTP_synthase_[Amyelois_transitella]	GO:0000166 F nucleotide binding GO:0003883 F CTP synthase activity GO:0005524 F ATP binding GO:0006221 P pyrimidine nucleotide biosynthetic process GO:0006541 P glutamine metabolic process GO:0016874 F ligase activity GO:0044210 P 'de novo' CTP biosynthetic process
7443	O_BomoSK166_internal:A_BomoSK_comp558_c0_seq1 167bp	Bomo_Chr1	PREDICTED:_sterol_regulatory_element-binding_protein_cleavage-activating_protein_[Bombyx_mori]
7444	O_BomoSK16700_complete:A_BomoSK_comp13914_c0_seq1 254bp	Bomo_Chr4		GO:0005215 F transporter activity GO:0005622 C intracellular anatomical structure GO:0005768 C endosome GO:0005794 C Golgi apparatus GO:0005802 C trans-Golgi network GO:0006810 P transport GO:0007040 P lysosome organization GO:0008289 F lipid binding GO:0016020 C membrane GO:0030136 C clathrin-coated vesicle GO:0031410 C cytoplasmic vesicle GO:0031901 C early endosome membrane GO:0080025 F phosphatidylinositol-3,5-bisphosphate binding
7445	O_BomoSK16701_complete:A_BomoSK_comp13914_c0_seq2 177bp	Bomo_Chr4		GO:0005215 F transporter activity GO:0005622 C intracellular anatomical structure GO:0005768 C endosome GO:0005794 C Golgi apparatus GO:0005802 C trans-Golgi network GO:0006810 P transport GO:0007040 P lysosome organization GO:0008289 F lipid binding GO:0016020 C membrane GO:0030136 C clathrin-coated vesicle GO:0031410 C cytoplasmic vesicle GO:0031901 C early endosome membrane GO:0080025 F phosphatidylinositol-3,5-bisphosphate binding
7446	O_BomoSK16702_complete:A_BomoSK_comp13914_c0_seq3 282bp	Bomo_Chr4		GO:0005215 F transporter activity GO:0005622 C intracellular anatomical structure GO:0006810 P transport GO:0016020 C membrane
7447	O_BomoSK16703_complete:A_BomoSK_comp13914_c0_seq3 145bp	Bomo_Chr4
7448	O_BomoSK16704_internal:A_BomoSK_comp13915_c0_seq1 302bp	Bomo_Chr9		GO:0001409 F guanine nucleotide transmembrane transporter activity GO:0001726 C ruffle GO:0005085 F guanyl-nucleotide exchange factor activity GO:0005086 F guanyl-nucleotide exchange factor activity GO:0005543 F phospholipid binding GO:0005886 C plasma membrane GO:0015854 P guanine transport GO:0016020 C membrane GO:0016021 C integral component of membrane GO:0030182 P neuron differentiation GO:0032012 P regulation of ARF protein signal transduction GO:0042995 C cell projection GO:0043547 P positive regulation of GTPase activity GO:1903790 P guanine nucleotide transmembrane transport
7449	O_BomoSK16705_5prime_partial:A_BomoSK_comp13915_c0_seq1 137bp	Bomo_Chr9
7450	O_BomoSK16706_complete:A_BomoSK_comp13915_c0_seq1 131bp	Bomo_Chr9
7451	O_BomoSK16707_5prime_partial:A_BomoSK_comp13915_c0_seq1 127bp	Bomo_Chr9
7452	O_BomoSK16708_internal:A_BomoSK_comp13915_c0_seq2 330bp	Bomo_Chr9		GO:0001409 F guanine nucleotide transmembrane transporter activity GO:0001726 C ruffle GO:0005085 F guanyl-nucleotide exchange factor activity GO:0005086 F guanyl-nucleotide exchange factor activity GO:0005543 F phospholipid binding GO:0005886 C plasma membrane GO:0015854 P guanine transport GO:0016020 C membrane GO:0016021 C integral component of membrane GO:0030182 P neuron differentiation GO:0032012 P regulation of ARF protein signal transduction GO:0042995 C cell projection GO:0043547 P positive regulation of GTPase activity GO:1903790 P guanine nucleotide transmembrane transport
7453	O_BomoSK16709_complete:A_BomoSK_comp13915_c0_seq2 159bp	Bomo_Chr9
7454	O_BomoSK1670_5prime_partial:A_BomoSK_comp4484_c0_seq1 397bp	Bomo_Chr27	PREDICTED:_tyrosine-protein_phosphatase_CDC14_homolog_[Bombyx_mori]
7455	O_BomoSK16710_5prime_partial:A_BomoSK_comp13915_c0_seq2 137bp	Bomo_Chr9
7456	O_BomoSK16711_5prime_partial:A_BomoSK_comp13915_c0_seq2 127bp	Bomo_Chr9
7457	O_BomoSK16712_5prime_partial:A_BomoSK_comp13916_c0_seq1 150bp	Bomo_Chr24		GO:0000122 P negative regulation of transcription by RNA polymerase II GO:0001103 F RNA polymerase II-specific DNA-binding transcription factor binding GO:0001106 F transcription corepressor activity GO:0003713 F transcription coactivator activity GO:0005515 F protein binding GO:0005634 C nucleus GO:0005730 C nucleolus GO:0006351 P transcription, DNA-templated GO:0006355 P regulation of transcription, DNA-templated GO:0006366 P transcription by RNA polymerase II GO:0015629 C actin cytoskeleton GO:0044822 F RNA binding GO:0070064 F proline-rich region binding
7458	O_BomoSK16713_complete:A_BomoSK_comp13916_c0_seq2 272bp	Bomo_Scaf578		GO:0000166 F nucleotide binding GO:0003743 F translation initiation factor activity GO:0003924 F GTPase activity GO:0005525 F GTP binding GO:0005622 C intracellular anatomical structure GO:0005737 C cytoplasm GO:0006412 P translation GO:0006413 P translational initiation
7459	O_BomoSK16714_complete:A_BomoSK_comp13916_c0_seq3 272bp	Bomo_Scaf578		GO:0000166 F nucleotide binding GO:0003743 F translation initiation factor activity GO:0003924 F GTPase activity GO:0005525 F GTP binding GO:0005622 C intracellular anatomical structure GO:0005737 C cytoplasm GO:0006412 P translation GO:0006413 P translational initiation
7460	O_BomoSK16715_5prime_partial:A_BomoSK_comp13916_c0_seq3 188bp	Bomo_Scaf578		GO:0000122 P negative regulation of transcription by RNA polymerase II GO:0001103 F RNA polymerase II-specific DNA-binding transcription factor binding GO:0001106 F transcription corepressor activity GO:0003713 F transcription coactivator activity GO:0005515 F protein binding GO:0005634 C nucleus GO:0005730 C nucleolus GO:0006351 P transcription, DNA-templated GO:0006355 P regulation of transcription, DNA-templated GO:0006366 P transcription by RNA polymerase II GO:0015629 C actin cytoskeleton GO:0044822 F RNA binding GO:0070064 F proline-rich region binding
7461	O_BomoSK16716_5prime_partial:A_BomoSK_comp13916_c0_seq4 188bp	Bomo_Chr24		GO:0000122 P negative regulation of transcription by RNA polymerase II GO:0001103 F RNA polymerase II-specific DNA-binding transcription factor binding GO:0001106 F transcription corepressor activity GO:0003713 F transcription coactivator activity GO:0005515 F protein binding GO:0005634 C nucleus GO:0005730 C nucleolus GO:0006351 P transcription, DNA-templated GO:0006355 P regulation of transcription, DNA-templated GO:0006366 P transcription by RNA polymerase II GO:0015629 C actin cytoskeleton GO:0044822 F RNA binding GO:0070064 F proline-rich region binding
7462	O_BomoSK16717_5prime_partial:A_BomoSK_comp13916_c0_seq5 205bp	Bomo_Chr24		GO:0000122 P negative regulation of transcription by RNA polymerase II GO:0001103 F RNA polymerase II-specific DNA-binding transcription factor binding GO:0001106 F transcription corepressor activity GO:0003713 F transcription coactivator activity GO:0005515 F protein binding GO:0005634 C nucleus GO:0005730 C nucleolus GO:0006351 P transcription, DNA-templated GO:0006355 P regulation of transcription, DNA-templated GO:0006366 P transcription by RNA polymerase II GO:0015629 C actin cytoskeleton GO:0044822 F RNA binding GO:0070064 F proline-rich region binding
7463	O_BomoSK16718_complete:A_BomoSK_comp13916_c0_seq5 108bp	Bomo_Chr24
7464	O_BomoSK16719_complete:A_BomoSK_comp13916_c0_seq6 272bp	Bomo_Scaf578		GO:0000166 F nucleotide binding GO:0003743 F translation initiation factor activity GO:0003924 F GTPase activity GO:0005525 F GTP binding GO:0005622 C intracellular anatomical structure GO:0005737 C cytoplasm GO:0006412 P translation GO:0006413 P translational initiation
7465	O_BomoSK1671_complete:A_BomoSK_comp4484_c0_seq1 160bp	Bomo_Chr27	multidrug_transporter_AcrB_[Prevotella_amnii]
7466	O_BomoSK16720_5prime_partial:A_BomoSK_comp13916_c0_seq6 150bp	Bomo_Scaf578		GO:0000122 P negative regulation of transcription by RNA polymerase II GO:0001103 F RNA polymerase II-specific DNA-binding transcription factor binding GO:0001106 F transcription corepressor activity GO:0003713 F transcription coactivator activity GO:0005515 F protein binding GO:0005634 C nucleus GO:0005730 C nucleolus GO:0006351 P transcription, DNA-templated GO:0006355 P regulation of transcription, DNA-templated GO:0006366 P transcription by RNA polymerase II GO:0015629 C actin cytoskeleton GO:0044822 F RNA binding GO:0070064 F proline-rich region binding
7467	O_BomoSK16721_5prime_partial:A_BomoSK_comp13916_c0_seq7 350bp	Bomo_Scaf578		GO:0000122 P negative regulation of transcription by RNA polymerase II GO:0001103 F RNA polymerase II-specific DNA-binding transcription factor binding GO:0001106 F transcription corepressor activity GO:0003713 F transcription coactivator activity GO:0005515 F protein binding GO:0005634 C nucleus GO:0005730 C nucleolus GO:0006351 P transcription, DNA-templated GO:0006355 P regulation of transcription, DNA-templated GO:0006366 P transcription by RNA polymerase II GO:0015629 C actin cytoskeleton GO:0044822 F RNA binding GO:0070064 F proline-rich region binding
7468	O_BomoSK16722_complete:A_BomoSK_comp13916_c0_seq7 272bp	Bomo_Scaf578		GO:0000166 F nucleotide binding GO:0003743 F translation initiation factor activity GO:0003924 F GTPase activity GO:0005525 F GTP binding GO:0005622 C intracellular anatomical structure GO:0005737 C cytoplasm GO:0006412 P translation GO:0006413 P translational initiation
7469	O_BomoSK16723_complete:A_BomoSK_comp13917_c0_seq1 127bp	Bomo_Chr17		GO:0000045 P autophagosome assembly GO:0000422 P autophagy of mitochondrion GO:0003674 F molecular_function GO:0005737 C cytoplasm GO:0006501 P C-terminal protein lipidation GO:0006914 P autophagy GO:0009267 P cellular response to starvation GO:0016236 P macroautophagy GO:0019776 F Atg8 ligase activity GO:0031386 F protein tag GO:0034045 C phagophore assembly site membrane GO:0034274 C Atg12-Atg5-Atg16 complex GO:0035071 P salivary gland cell autophagic cell death GO:0035096 P larval midgut cell programmed cell death GO:0044804 P autophagy of nucleus GO:0048102 P autophagic cell death GO:0061723 P glycophagy
7470	O_BomoSK16724_complete:A_BomoSK_comp13918_c4_seq1 273bp	Bomo_Scaf005		GO:0005737 C cytoplasm GO:0005764 C lysosome GO:0005768 C endosome GO:0005769 C early endosome GO:0005770 C late endosome GO:0005829 C cytosol GO:0006622 P protein targeting to lysosome GO:0006810 P transport GO:0008289 F lipid binding GO:0008333 P endosome to lysosome transport GO:0015031 P protein transport GO:0016020 C membrane GO:0031313 C extrinsic component of endosome membrane GO:0031901 C early endosome membrane GO:0031902 C late endosome membrane GO:0035091 F phosphatidylinositol binding GO:0042802 F identical protein binding GO:0045022 P early endosome to late endosome transport