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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
691 O_BomoSK10622_complete:A_BomoSK_comp12281_c0_seq1
105bp
 hypothetical_protein_PHYSODRAFT_321809_[Phytophthora_sojae]
692 O_BomoSK10623_complete:A_BomoSK_comp12281_c0_seq2
1293bp
 MESH_BOMMO_RecName:_Full=Protein_mesh;_Flags:_Precursor
GO:0005886 C plasma membrane
GO:0005918 C septate junction
GO:0007160 P cell-matrix adhesion
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016328 C lateral plasma membrane
GO:0030054 C cell junction
693 O_BomoSK10624_complete:A_BomoSK_comp12281_c0_seq2
105bp
 hypothetical_protein_PHYSODRAFT_321809_[Phytophthora_sojae]
694 O_BomoSK10625_complete:A_BomoSK_comp12283_c0_seq1
228bp
 PREDICTED:_uncharacterized_protein_LOC101736534_[Bombyx_mori]
695 O_BomoSK10626_complete:A_BomoSK_comp12283_c0_seq2
275bp
 PREDICTED:_uncharacterized_protein_LOC101736534_[Bombyx_mori]
696 O_BomoSK10627_5prime_partial:A_BomoSK_comp12283_c0_seq3
309bp
 PREDICTED:_uncharacterized_protein_LOC101736534_[Bombyx_mori]
697 O_BomoSK10628_5prime_partial:A_BomoSK_comp12283_c0_seq4
262bp
 PREDICTED:_uncharacterized_protein_LOC101736534_[Bombyx_mori]
698 O_BomoSK10629_5prime_partial:A_BomoSK_comp12285_c0_seq2
157bp
 PREDICTED:_uncharacterized_protein_LOC106129002_[Amyelois_transitella]
699 O_BomoSK1062_complete:A_BomoSK_comp3847_c0_seq1
418bp
 cyclin_L1_[Bombyx_mori]
GO:0000079 P regulation of cyclin-dependent protein serine/threonine kinase activity
GO:0000307 C cyclin-dependent protein kinase holoenzyme complex
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0016538 F cyclin-dependent protein serine/threonine kinase regulator activity
GO:0016607 C nuclear speck
GO:0019901 F protein kinase binding
GO:0045737 P positive regulation of cyclin-dependent protein serine/threonine kinase activity
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:1901409 P positive regulation of phosphorylation of RNA polymerase II C-terminal domain
700 O_BomoSK10630_complete:A_BomoSK_comp12285_c0_seq2
149bp
 PREDICTED:_U11/U12_small_nuclear_ribonucleoprotein_25_kDa_protein-like_[Papilio_polytes]
GO:0003674 F molecular_function
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005681 C spliceosomal complex
GO:0005689 C U12-type spliceosomal complex
GO:0005737 C cytoplasm
GO:0006397 P mRNA processing
GO:0008150 P biological_process
GO:0008380 P RNA splicing
GO:0045171 C intercellular bridge
701 O_BomoSK10631_5prime_partial:A_BomoSK_comp12285_c0_seq3
157bp
 PREDICTED:_uncharacterized_protein_LOC106129002_[Amyelois_transitella]
702 O_BomoSK10632_complete:A_BomoSK_comp12286_c0_seq5
171bp
 PREDICTED:_diamine_acetyltransferase_2-like_[Bombyx_mori]
GO:0004145 F diamine N-acetyltransferase activity
GO:0005737 C cytoplasm
GO:0008080 F N-acetyltransferase activity
GO:0009447 P putrescine catabolic process
GO:0016740 F transferase activity
GO:0016746 F acyltransferase activity
703 O_BomoSK10633_complete:A_BomoSK_comp12286_c0_seq6
171bp
 PREDICTED:_diamine_acetyltransferase_2-like_[Bombyx_mori]
GO:0004145 F diamine N-acetyltransferase activity
GO:0005737 C cytoplasm
GO:0008080 F N-acetyltransferase activity
GO:0009447 P putrescine catabolic process
GO:0016740 F transferase activity
GO:0016746 F acyltransferase activity
704 O_BomoSK10634_5prime_partial:A_BomoSK_comp12287_c0_seq1
214bp
 PREDICTED:_protein_phosphatase_1_regulatory_subunit_7_[Bombyx_mori]
GO:0005634 C nucleus
705 O_BomoSK10635_3prime_partial:A_BomoSK_comp12287_c0_seq2
134bp
 PREDICTED:_protein_phosphatase_1_regulatory_subunit_7_[Bombyx_mori]
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0007059 P chromosome segregation
GO:0035307 P positive regulation of protein dephosphorylation
GO:0070062 C extracellular exosome
706 O_BomoSK10636_complete:A_BomoSK_comp12289_c0_seq1
223bp
 PREDICTED:_ubiquitin_carboxyl-terminal_hydrolase_14_[Papilio_polytes]
GO:0000502 C proteasome complex
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0006508 P proteolysis
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0008233 F peptidase activity
GO:0008234 F cysteine-type peptidase activity
GO:0016020 C membrane
GO:0016579 P protein deubiquitination
GO:0016787 F hydrolase activity
GO:0036459 F thiol-dependent deubiquitinase
GO:0070628 F proteasome binding
707 O_BomoSK10637_complete:A_BomoSK_comp12289_c0_seq1
140bp
 hypothetical_protein_[Oceanicola_sp._MCTG156(1a)]
708 O_BomoSK10638_5prime_partial:A_BomoSK_comp12289_c0_seq4
317bp
 PREDICTED:_ubiquitin_carboxyl-terminal_hydrolase_14_[Amyelois_transitella]
GO:0000502 C proteasome complex
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0006508 P proteolysis
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0008233 F peptidase activity
GO:0008234 F cysteine-type peptidase activity
GO:0016020 C membrane
GO:0016579 P protein deubiquitination
GO:0016787 F hydrolase activity
GO:0036459 F thiol-dependent deubiquitinase
GO:0070628 F proteasome binding
709 O_BomoSK10639_complete:A_BomoSK_comp12289_c0_seq4
140bp
 hypothetical_protein_[Oceanicola_sp._MCTG156(1a)]
710 O_BomoSK1063_complete:A_BomoSK_comp3847_c0_seq1
101bp
711 O_BomoSK10640_complete:A_BomoSK_comp12291_c1_seq1
103bp
 MFS_transporter_[Methylocapsa_acidiphila]
712 O_BomoSK10641_complete:A_BomoSK_comp12293_c0_seq1
161bp
 hypothetical_protein_KGM_14251_[Danaus_plexippus]
GO:0000139 C Golgi membrane
GO:0002178 C palmitoyltransferase complex
GO:0005515 F protein binding
GO:0005794 C Golgi apparatus
GO:0005795 C Golgi stack
GO:0016020 C membrane
GO:0018230 P peptidyl-L-cysteine S-palmitoylation
GO:0031228 C intrinsic component of Golgi membrane
GO:0043001 P Golgi to plasma membrane protein transport
GO:0050821 P protein stabilization
GO:0070062 C extracellular exosome
713 O_BomoSK10642_complete:A_BomoSK_comp12294_c0_seq1
131bp
 hypothetical_protein_RR48_00661_[Papilio_machaon]
GO:0000375 P RNA splicing, via transesterification reactions
GO:0000381 P regulation of alternative mRNA splicing, via spliceosome
GO:0005634 C nucleus
GO:0006397 P mRNA processing
GO:0007275 P multicellular organism development
GO:0008380 P RNA splicing
GO:0048024 P regulation of mRNA splicing, via spliceosome
714 O_BomoSK10643_complete:A_BomoSK_comp12294_c0_seq1
124bp
 hypothetical_protein_[Marivirga_tractuosa]
715 O_BomoSK10644_complete:A_BomoSK_comp12294_c0_seq2
131bp
 hypothetical_protein_RR48_00661_[Papilio_machaon]
GO:0000375 P RNA splicing, via transesterification reactions
GO:0000381 P regulation of alternative mRNA splicing, via spliceosome
GO:0005634 C nucleus
GO:0006397 P mRNA processing
GO:0007275 P multicellular organism development
GO:0008380 P RNA splicing
GO:0048024 P regulation of mRNA splicing, via spliceosome
716 O_BomoSK10645_complete:A_BomoSK_comp12294_c0_seq2
124bp
 hypothetical_protein_[Marivirga_tractuosa]
717 O_BomoSK10646_complete:A_BomoSK_comp12294_c0_seq3
304bp
 PREDICTED:_pre-mRNA-splicing_regulator_female-lethal(2)D_[Amyelois_transitella]
GO:0000375 P RNA splicing, via transesterification reactions
GO:0000381 P regulation of alternative mRNA splicing, via spliceosome
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006397 P mRNA processing
GO:0007275 P multicellular organism development
GO:0007530 P sex determination
GO:0007539 P primary sex determination, soma
GO:0008380 P RNA splicing
GO:0019099 P female germ-line sex determination
GO:0046331 P lateral inhibition
GO:0048024 P regulation of mRNA splicing, via spliceosome
GO:0048749 P compound eye development
GO:0080009 P mRNA methylation
718 O_BomoSK10647_complete:A_BomoSK_comp12294_c0_seq3
124bp
 hypothetical_protein_[Marivirga_tractuosa]
719 O_BomoSK10648_complete:A_BomoSK_comp12295_c1_seq1
404bp
 PREDICTED:_altered_inheritance_of_mitochondria_protein_21_isoform_X1_[Bombyx_mori]
GO:0000900 F translation repressor activity, mRNA regulatory element binding
GO:0005575 C cellular_component
GO:0006417 P regulation of translation
GO:0008143 F poly(A) binding
GO:0017148 P negative regulation of translation
GO:0045947 P negative regulation of translational initiation
720 O_BomoSK10649_complete:A_BomoSK_comp12296_c0_seq1
261bp
 PREDICTED:_cAMP_responsive_element_binding_protein_isoform_X4_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007528 P neuromuscular junction development
GO:0007611 P learning or memory
GO:0007616 P long-term memory
GO:0007622 P rhythmic behavior
GO:0007623 P circadian rhythm
GO:0030431 P sleep
GO:0040040 P thermosensory behavior
GO:0043565 F sequence-specific DNA binding
GO:0045187 P regulation of circadian sleep/wake cycle, sleep
GO:0045475 P locomotor rhythm
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046983 F protein dimerization activity
GO:0072375 P medium-term memory
GO:2000253 P positive regulation of feeding behavior
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