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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
6841 O_BomoSK16158_complete:A_BomoSK_comp13816_c0_seq1
127bp
6842 O_BomoSK16159_complete:A_BomoSK_comp13817_c0_seq1
857bp
GO:0005634 C nucleus
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
6843 O_BomoSK1615_complete:A_BomoSK_comp4419_c0_seq1
131bp
 146aa_long_hypothetical_protein_[Pyrococcus_horikoshii_OT3]
6844 O_BomoSK16160_complete:A_BomoSK_comp13817_c0_seq1
250bp
6845 O_BomoSK16161_complete:A_BomoSK_comp13817_c0_seq1
129bp
6846 O_BomoSK16162_complete:A_BomoSK_comp13817_c0_seq2
939bp
GO:0005634 C nucleus
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
6847 O_BomoSK16163_complete:A_BomoSK_comp13817_c0_seq2
250bp
6848 O_BomoSK16164_complete:A_BomoSK_comp13817_c0_seq2
129bp
6849 O_BomoSK16165_complete:A_BomoSK_comp13817_c0_seq3
857bp
GO:0005634 C nucleus
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
6850 O_BomoSK16166_complete:A_BomoSK_comp13817_c0_seq3
250bp
6851 O_BomoSK16167_complete:A_BomoSK_comp13817_c0_seq3
129bp
6852 O_BomoSK16168_complete:A_BomoSK_comp13818_c0_seq1
2844bp
GO:0000209 P protein polyubiquitination
GO:0003723 F RNA binding
GO:0004842 F ubiquitin-protein transferase activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0007112 P male meiosis cytokinesis
GO:0007281 P germ cell development
GO:0007283 P spermatogenesis
GO:0007289 P spermatid nucleus differentiation
GO:0007444 P imaginal disc development
GO:0007446 P imaginal disc growth
GO:0007455 P eye-antennal disc morphogenesis
GO:0008270 F zinc ion binding
GO:0008585 P female gonad development
GO:0016874 F ligase activity
GO:0030162 P regulation of proteolysis
GO:0034450 F ubiquitin-ubiquitin ligase activity
GO:0042127 P regulation of cell population proliferation
GO:0042787 P ubiquitin-dependent protein catabolic process
GO:0043130 F ubiquitin binding
GO:0045879 P negative regulation of smoothened signaling pathway
GO:0046872 F metal ion binding
GO:0048749 P compound eye development
6853 O_BomoSK16169_complete:A_BomoSK_comp13818_c0_seq1
489bp
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0007275 P multicellular organism development
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016758 F hexosyltransferase activity
6854 O_BomoSK1616_complete:A_BomoSK_comp4419_c0_seq2
383bp
 PREDICTED:_ATPase_family_AAA_domain-containing_protein_1-like_isoform_X1_[Amyelois_transitella]
GO:0000166 F nucleotide binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005777 C peroxisome
GO:0005886 C plasma membrane
GO:0008152 P metabolic process
GO:0008568 F microtubule-severing ATPase activity
GO:0016020 C membrane
GO:0016787 F hydrolase activity
GO:0016887 F ATP hydrolysis activity
GO:0030054 C cell junction
GO:0031122 P cytoplasmic microtubule organization
GO:0045202 C synapse
GO:0045211 C postsynaptic membrane
6855 O_BomoSK16170_complete:A_BomoSK_comp13818_c0_seq1
224bp
6856 O_BomoSK16171_complete:A_BomoSK_comp13818_c0_seq1
132bp
6857 O_BomoSK16172_complete:A_BomoSK_comp13818_c0_seq1
132bp
6858 O_BomoSK16173_complete:A_BomoSK_comp13818_c0_seq2
2850bp
GO:0000209 P protein polyubiquitination
GO:0003723 F RNA binding
GO:0004842 F ubiquitin-protein transferase activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0007112 P male meiosis cytokinesis
GO:0007281 P germ cell development
GO:0007283 P spermatogenesis
GO:0007289 P spermatid nucleus differentiation
GO:0007444 P imaginal disc development
GO:0007446 P imaginal disc growth
GO:0007455 P eye-antennal disc morphogenesis
GO:0008270 F zinc ion binding
GO:0008585 P female gonad development
GO:0016874 F ligase activity
GO:0030162 P regulation of proteolysis
GO:0034450 F ubiquitin-ubiquitin ligase activity
GO:0042127 P regulation of cell population proliferation
GO:0042787 P ubiquitin-dependent protein catabolic process
GO:0043130 F ubiquitin binding
GO:0045879 P negative regulation of smoothened signaling pathway
GO:0046872 F metal ion binding
GO:0048749 P compound eye development
6859 O_BomoSK16174_complete:A_BomoSK_comp13818_c0_seq2
489bp
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0007275 P multicellular organism development
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016758 F hexosyltransferase activity
6860 O_BomoSK16175_complete:A_BomoSK_comp13818_c0_seq2
224bp
6861 O_BomoSK16176_complete:A_BomoSK_comp13818_c0_seq2
138bp
6862 O_BomoSK16177_complete:A_BomoSK_comp13818_c0_seq2
132bp
6863 O_BomoSK16178_complete:A_BomoSK_comp13819_c0_seq1
255bp
GO:0000166 F nucleotide binding
GO:0000398 P mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003729 F mRNA binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0007067 P mitotic cell cycle
GO:0007303 P cytoplasmic transport, nurse cell to oocyte
GO:0007562 P eclosion
GO:0007623 P circadian rhythm
GO:0008062 P eclosion rhythm
GO:0008104 P protein localization
GO:0008270 F zinc ion binding
GO:0009790 P embryo development
GO:0030036 P actin cytoskeleton organization
GO:0040011 P locomotion
GO:0045475 P locomotor rhythm
GO:0045804 P negative regulation of eclosion
GO:0045995 P regulation of embryonic development
GO:0046872 F metal ion binding
GO:0048511 P rhythmic process
GO:0071011 C precatalytic spliceosome
GO:0071013 C catalytic step 2 spliceosome
6864 O_BomoSK16179_complete:A_BomoSK_comp13819_c0_seq1
106bp
6865 O_BomoSK1617_complete:A_BomoSK_comp4419_c0_seq2
143bp
 alanine_racemase_[Actinopolyspora_erythraea]
6866 O_BomoSK16180_complete:A_BomoSK_comp13819_c0_seq2
272bp
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0006397 P mRNA processing
GO:0006417 P regulation of translation
GO:0007623 P circadian rhythm
GO:0008270 F zinc ion binding
GO:0008380 P RNA splicing
GO:0010628 P positive regulation of gene expression
GO:0032922 P circadian regulation of gene expression
GO:0043153 P entrainment of circadian clock by photoperiod
GO:0044822 F RNA binding
GO:0046872 F metal ion binding
6867 O_BomoSK16181_complete:A_BomoSK_comp13819_c0_seq2
118bp
6868 O_BomoSK16182_complete:A_BomoSK_comp13819_c0_seq3
253bp
GO:0000166 F nucleotide binding
GO:0000398 P mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003729 F mRNA binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0007067 P mitotic cell cycle
GO:0007303 P cytoplasmic transport, nurse cell to oocyte
GO:0007562 P eclosion
GO:0007623 P circadian rhythm
GO:0008062 P eclosion rhythm
GO:0008104 P protein localization
GO:0008270 F zinc ion binding
GO:0009790 P embryo development
GO:0030036 P actin cytoskeleton organization
GO:0040011 P locomotion
GO:0045475 P locomotor rhythm
GO:0045804 P negative regulation of eclosion
GO:0045995 P regulation of embryonic development
GO:0046872 F metal ion binding
GO:0048511 P rhythmic process
GO:0071011 C precatalytic spliceosome
GO:0071013 C catalytic step 2 spliceosome
6869 O_BomoSK16183_complete:A_BomoSK_comp13819_c0_seq3
105bp
6870 O_BomoSK16184_complete:A_BomoSK_comp13820_c0_seq1
440bp
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0005840 C ribosome
GO:0030529 C ribonucleoprotein complex
GO:0070124 P mitochondrial translational initiation
GO:0070125 P mitochondrial translational elongation
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