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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
6811 O_BomoSK16130_complete:A_BomoSK_comp13805_c1_seq42
127bp
6812 O_BomoSK16131_complete:A_BomoSK_comp13805_c1_seq43
167bp
6813 O_BomoSK16132_complete:A_BomoSK_comp13805_c1_seq43
127bp
6814 O_BomoSK16133_complete:A_BomoSK_comp13805_c1_seq44
277bp
GO:0000166 F nucleotide binding
GO:0004017 F adenylate kinase activity
GO:0004127 F cytidylate kinase activity
GO:0004550 F nucleoside diphosphate kinase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005930 C axoneme
GO:0006139 P nucleobase-containing compound metabolic process
GO:0006165 P nucleoside diphosphate phosphorylation
GO:0009142 P nucleoside triphosphate biosynthetic process
GO:0009165 P nucleotide biosynthetic process
GO:0015949 P nucleobase-containing small molecule interconversion
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0019205 F nucleobase-containing compound kinase activity
GO:0019206 F nucleoside kinase activity
GO:0021591 P ventricular system development
GO:0036126 C sperm flagellum
6815 O_BomoSK16134_complete:A_BomoSK_comp13805_c1_seq44
129bp
6816 O_BomoSK16135_complete:A_BomoSK_comp13805_c1_seq45
129bp
6817 O_BomoSK16136_complete:A_BomoSK_comp13805_c1_seq46
458bp
GO:0000166 F nucleotide binding
GO:0004017 F adenylate kinase activity
GO:0004127 F cytidylate kinase activity
GO:0004550 F nucleoside diphosphate kinase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005930 C axoneme
GO:0006139 P nucleobase-containing compound metabolic process
GO:0006165 P nucleoside diphosphate phosphorylation
GO:0009142 P nucleoside triphosphate biosynthetic process
GO:0009165 P nucleotide biosynthetic process
GO:0015949 P nucleobase-containing small molecule interconversion
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0019205 F nucleobase-containing compound kinase activity
GO:0019206 F nucleoside kinase activity
GO:0021591 P ventricular system development
GO:0036126 C sperm flagellum
6818 O_BomoSK16137_5prime_partial:A_BomoSK_comp13807_c0_seq2
413bp
GO:0000166 F nucleotide binding
GO:0000287 F magnesium ion binding
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006468 P protein phosphorylation
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0035175 F histone kinase activity (H3-S10 specific)
GO:0035556 P intracellular signal transduction
GO:0043987 P histone H3-S10 phosphorylation
GO:0043988 P histone H3-S28 phosphorylation
GO:0045944 P positive regulation of transcription by RNA polymerase II
6819 O_BomoSK16138_complete:A_BomoSK_comp13807_c0_seq2
106bp
6820 O_BomoSK16139_5prime_partial:A_BomoSK_comp13808_c0_seq1
343bp
GO:0004161 F dimethylallyltranstransferase activity
GO:0004311 F farnesyltranstransferase activity
GO:0004337 F geranyltranstransferase activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006695 P cholesterol biosynthetic process
GO:0006720 P isoprenoid metabolic process
GO:0008299 P isoprenoid biosynthetic process
GO:0016740 F transferase activity
GO:0033384 P geranyl diphosphate biosynthetic process
GO:0033386 P geranylgeranyl diphosphate biosynthetic process
GO:0045337 P farnesyl diphosphate biosynthetic process
GO:0046872 F metal ion binding
6821 O_BomoSK1613_complete:A_BomoSK_comp4419_c0_seq1
379bp
 PREDICTED:_ATPase_family_AAA_domain-containing_protein_1-like_isoform_X2_[Amyelois_transitella]
GO:0000166 F nucleotide binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005777 C peroxisome
GO:0005886 C plasma membrane
GO:0008152 P metabolic process
GO:0008568 F microtubule-severing ATPase activity
GO:0016020 C membrane
GO:0016787 F hydrolase activity
GO:0016887 F ATP hydrolysis activity
GO:0030054 C cell junction
GO:0031122 P cytoplasmic microtubule organization
GO:0045202 C synapse
GO:0045211 C postsynaptic membrane
6822 O_BomoSK16140_complete:A_BomoSK_comp13809_c0_seq1
516bp
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0006810 P transport
GO:0008150 P biological_process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0055085 P transmembrane transport
6823 O_BomoSK16141_complete:A_BomoSK_comp13809_c0_seq1
281bp
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
GO:0008152 P metabolic process
GO:0008270 F zinc ion binding
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016740 F transferase activity
GO:0016746 F acyltransferase activity
GO:0019706 F protein-cysteine S-palmitoyltransferase activity
GO:0046872 F metal ion binding
6824 O_BomoSK16142_complete:A_BomoSK_comp13809_c0_seq2
281bp
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
GO:0008152 P metabolic process
GO:0008270 F zinc ion binding
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016740 F transferase activity
GO:0016746 F acyltransferase activity
GO:0019706 F protein-cysteine S-palmitoyltransferase activity
GO:0046872 F metal ion binding
6825 O_BomoSK16143_complete:A_BomoSK_comp13809_c0_seq2
132bp
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0006810 P transport
GO:0008150 P biological_process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0055085 P transmembrane transport
6826 O_BomoSK16144_5prime_partial:A_BomoSK_comp13811_c1_seq1
132bp
6827 O_BomoSK16145_3prime_partial:A_BomoSK_comp13813_c0_seq1
257bp
GO:0000166 F nucleotide binding
GO:0000381 P regulation of alternative mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003729 F mRNA binding
GO:0005634 C nucleus
GO:0005849 C mRNA cleavage factor complex
GO:0006379 P mRNA cleavage
GO:0006397 P mRNA processing
6828 O_BomoSK16146_complete:A_BomoSK_comp13813_c0_seq2
177bp
GO:0000166 F nucleotide binding
GO:0000381 P regulation of alternative mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003729 F mRNA binding
GO:0005634 C nucleus
GO:0005849 C mRNA cleavage factor complex
GO:0006379 P mRNA cleavage
GO:0006397 P mRNA processing
6829 O_BomoSK16147_complete:A_BomoSK_comp13814_c0_seq1
347bp
6830 O_BomoSK16148_complete:A_BomoSK_comp13814_c0_seq2
351bp
6831 O_BomoSK16149_internal:A_BomoSK_comp13815_c0_seq1
921bp
GO:0000123 C histone acetyltransferase complex
GO:0003682 F chromatin binding
GO:0003684 F damaged DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0003712 F transcription coregulator activity
GO:0003713 F transcription coactivator activity
GO:0004402 F histone acetyltransferase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005667 C transcription regulator complex
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008270 F zinc ion binding
GO:0008283 P cell population proliferation
GO:0016407 F acetyltransferase activity
GO:0016573 P histone acetylation
GO:0016604 C nuclear body
GO:0016740 F transferase activity
GO:0016746 F acyltransferase activity
GO:0033613 F DNA-binding transcription factor binding
GO:0034644 P cellular response to UV
GO:0042975 F peroxisome proliferator activated receptor binding
GO:0043234 C protein-containing complex
GO:0043426 F MRF binding
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046332 F SMAD binding
GO:0046872 F metal ion binding
GO:0048511 P rhythmic process
GO:0060355 P positive regulation of cell adhesion molecule production
GO:0070555 P response to interleukin-1
GO:0098609 P cell-cell adhesion
GO:1900087 P positive regulation of G1/S transition of mitotic cell cycle
GO:1901224 P positive regulation of NIK/NF-kappaB signaling
6832 O_BomoSK1614_complete:A_BomoSK_comp4419_c0_seq1
143bp
 alanine_racemase_[Actinopolyspora_erythraea]
6833 O_BomoSK16150_5prime_partial:A_BomoSK_comp13815_c0_seq1
207bp
6834 O_BomoSK16151_5prime_partial:A_BomoSK_comp13815_c0_seq1
109bp
6835 O_BomoSK16152_complete:A_BomoSK_comp13815_c0_seq1
100bp
6836 O_BomoSK16153_internal:A_BomoSK_comp13815_c0_seq2
911bp
GO:0000123 C histone acetyltransferase complex
GO:0003682 F chromatin binding
GO:0003684 F damaged DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0003712 F transcription coregulator activity
GO:0003713 F transcription coactivator activity
GO:0004402 F histone acetyltransferase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005667 C transcription regulator complex
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008270 F zinc ion binding
GO:0008283 P cell population proliferation
GO:0016407 F acetyltransferase activity
GO:0016573 P histone acetylation
GO:0016604 C nuclear body
GO:0016740 F transferase activity
GO:0016746 F acyltransferase activity
GO:0033613 F DNA-binding transcription factor binding
GO:0034644 P cellular response to UV
GO:0042975 F peroxisome proliferator activated receptor binding
GO:0043234 C protein-containing complex
GO:0043426 F MRF binding
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046332 F SMAD binding
GO:0046872 F metal ion binding
GO:0048511 P rhythmic process
GO:0060355 P positive regulation of cell adhesion molecule production
GO:0070555 P response to interleukin-1
GO:0098609 P cell-cell adhesion
GO:1900087 P positive regulation of G1/S transition of mitotic cell cycle
GO:1901224 P positive regulation of NIK/NF-kappaB signaling
6837 O_BomoSK16154_5prime_partial:A_BomoSK_comp13815_c0_seq2
207bp
6838 O_BomoSK16155_5prime_partial:A_BomoSK_comp13815_c0_seq2
109bp
6839 O_BomoSK16156_complete:A_BomoSK_comp13815_c0_seq2
100bp
6840 O_BomoSK16157_3prime_partial:A_BomoSK_comp13816_c0_seq1
988bp
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