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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
61 O_BomoSK10055_complete:A_BomoSK_comp12029_c0_seq1
282bp
 hypothetical_protein_BVI061214_00334_[Thermus_aquaticus]
62 O_BomoSK10056_complete:A_BomoSK_comp12029_c0_seq1
110bp
 hypothetical_protein_[Bacillus_oceanisediminis]
63 O_BomoSK10057_5prime_partial:A_BomoSK_comp12030_c0_seq1
905bp
 PREDICTED:_valine--tRNA_ligase_[Papilio_machaon]
GO:0000166 F nucleotide binding
GO:0002161 F aminoacyl-tRNA editing activity
GO:0004812 F aminoacyl-tRNA ligase activity
GO:0004832 F valine-tRNA ligase activity
GO:0005524 F ATP binding
GO:0005739 C mitochondrion
GO:0005829 C cytosol
GO:0006412 P translation
GO:0006418 P tRNA aminoacylation for protein translation
GO:0006438 P valyl-tRNA aminoacylation
GO:0006450 P regulation of translational fidelity
GO:0016874 F ligase activity
64 O_BomoSK10058_complete:A_BomoSK_comp12030_c0_seq1
140bp
 DNA_repair_protein_RadA_[Ignavibacterium_album]
65 O_BomoSK10059_complete:A_BomoSK_comp12030_c0_seq2
1039bp
 PREDICTED:_valine--tRNA_ligase_[Papilio_machaon]
GO:0000166 F nucleotide binding
GO:0002161 F aminoacyl-tRNA editing activity
GO:0004812 F aminoacyl-tRNA ligase activity
GO:0004832 F valine-tRNA ligase activity
GO:0005524 F ATP binding
GO:0005739 C mitochondrion
GO:0005829 C cytosol
GO:0006412 P translation
GO:0006418 P tRNA aminoacylation for protein translation
GO:0006438 P valyl-tRNA aminoacylation
GO:0006450 P regulation of translational fidelity
GO:0016874 F ligase activity
66 O_BomoSK1005_3prime_partial:A_BomoSK_comp3788_c0_seq1
442bp
 PREDICTED:_uncharacterized_protein_LOC101744639_[Bombyx_mori]
67 O_BomoSK10060_complete:A_BomoSK_comp12030_c0_seq2
140bp
 DNA_repair_protein_RadA_[Ignavibacterium_album]
68 O_BomoSK10061_complete:A_BomoSK_comp12030_c0_seq2
114bp
 hypothetical_protein_NMY3_00151_[Thaumarchaeota_archaeon_MY3]
69 O_BomoSK10062_internal:A_BomoSK_comp12033_c0_seq1
230bp
 hypothetical_protein_Y023_5101_[Burkholderia_pseudomallei_A79D]
70 O_BomoSK10063_internal:A_BomoSK_comp12033_c0_seq1
230bp
71 O_BomoSK10064_internal:A_BomoSK_comp12033_c0_seq1
230bp
 PREDICTED:_histone_deacetylase_5_[Bombyx_mori]
GO:0000118 C histone deacetylase complex
GO:0004407 F histone deacetylase activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0010830 P regulation of myotube differentiation
GO:0016568 P chromatin organization
GO:0016575 P histone deacetylation
GO:0016787 F hydrolase activity
GO:0032041 F NAD-dependent histone deacetylase activity (H3-K14 specific)
GO:0040029 P regulation of gene expression, epigenetic
GO:0046872 F metal ion binding
GO:0070932 P histone H3 deacetylation
72 O_BomoSK10065_5prime_partial:A_BomoSK_comp12033_c0_seq2
170bp
 PREDICTED:_histone_deacetylase_5_[Bombyx_mori]
GO:0000118 C histone deacetylase complex
GO:0004407 F histone deacetylase activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0010830 P regulation of myotube differentiation
GO:0016568 P chromatin organization
GO:0016575 P histone deacetylation
GO:0016787 F hydrolase activity
GO:0032041 F NAD-dependent histone deacetylase activity (H3-K14 specific)
GO:0040029 P regulation of gene expression, epigenetic
GO:0046872 F metal ion binding
GO:0070932 P histone H3 deacetylation
73 O_BomoSK10066_5prime_partial:A_BomoSK_comp12033_c0_seq2
150bp
74 O_BomoSK10067_complete:A_BomoSK_comp12034_c0_seq1
226bp
 PREDICTED:_transmembrane_emp24_domain-containing_protein_5-like_[Papilio_machaon]
GO:0003674 F molecular_function
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0005793 C endoplasmic reticulum-Golgi intermediate compartment
GO:0005794 C Golgi apparatus
GO:0005801 C cis-Golgi network
GO:0006810 P transport
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0033116 C endoplasmic reticulum-Golgi intermediate compartment membrane
GO:0070971 C endoplasmic reticulum exit site
GO:0090161 P Golgi ribbon formation
75 O_BomoSK10068_complete:A_BomoSK_comp12034_c0_seq2
188bp
 PREDICTED:_transmembrane_emp24_domain-containing_protein_5-like_[Papilio_machaon]
GO:0003674 F molecular_function
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0005793 C endoplasmic reticulum-Golgi intermediate compartment
GO:0005794 C Golgi apparatus
GO:0005801 C cis-Golgi network
GO:0006810 P transport
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0033116 C endoplasmic reticulum-Golgi intermediate compartment membrane
GO:0070971 C endoplasmic reticulum exit site
GO:0090161 P Golgi ribbon formation
76 O_BomoSK10069_complete:A_BomoSK_comp12036_c0_seq1
346bp
 PREDICTED:_keratin,_type_I_cytoskeletal_10_isoform_X1_[Bombyx_mori]
77 O_BomoSK1006_complete:A_BomoSK_comp3788_c0_seq1
141bp
 aconitate_hydratase_[Massilia_sp._Root1485]
78 O_BomoSK10070_complete:A_BomoSK_comp12036_c0_seq1
171bp
 hypothetical_protein_AK830_g6573_[Neonectria_ditissima]
79 O_BomoSK10071_complete:A_BomoSK_comp12036_c0_seq1
125bp
 PREDICTED:_thioredoxin_reductase_3_[Tupaia_chinensis]
80 O_BomoSK10072_complete:A_BomoSK_comp12036_c0_seq2
365bp
 PREDICTED:_keratin,_type_I_cytoskeletal_10_isoform_X1_[Bombyx_mori]
81 O_BomoSK10073_complete:A_BomoSK_comp12036_c0_seq2
171bp
 hypothetical_protein_AK830_g6573_[Neonectria_ditissima]
82 O_BomoSK10074_complete:A_BomoSK_comp12036_c0_seq2
125bp
 PREDICTED:_thioredoxin_reductase_3_[Tupaia_chinensis]
83 O_BomoSK10075_complete:A_BomoSK_comp12036_c0_seq3
375bp
 PREDICTED:_keratin,_type_I_cytoskeletal_10_isoform_X1_[Bombyx_mori]
84 O_BomoSK10076_complete:A_BomoSK_comp12036_c0_seq3
181bp
 hypothetical_protein_[Trichomonas_vaginalis_G3]
85 O_BomoSK10077_complete:A_BomoSK_comp12036_c0_seq3
135bp
 PREDICTED:_LOW_QUALITY_PROTEIN:_tolloid-like_protein_2,_partial_[Colius_striatus]
86 O_BomoSK10078_complete:A_BomoSK_comp12036_c0_seq4
365bp
 PREDICTED:_keratin,_type_I_cytoskeletal_10_isoform_X1_[Bombyx_mori]
87 O_BomoSK10079_complete:A_BomoSK_comp12036_c0_seq4
171bp
 hypothetical_protein_AK830_g6573_[Neonectria_ditissima]
88 O_BomoSK1007_internal:A_BomoSK_comp3788_c0_seq2
396bp
 PREDICTED:_uncharacterized_protein_LOC101744639_[Bombyx_mori]
89 O_BomoSK10080_complete:A_BomoSK_comp12036_c0_seq4
125bp
 PREDICTED:_thioredoxin_reductase_3_[Tupaia_chinensis]
90 O_BomoSK10081_complete:A_BomoSK_comp12036_c0_seq5
356bp
 PREDICTED:_keratin,_type_I_cytoskeletal_10_isoform_X1_[Bombyx_mori]
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