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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
5791 O_BomoSK15212_complete:A_BomoSK_comp13660_c0_seq1
109bp
5792 O_BomoSK15213_complete:A_BomoSK_comp13660_c0_seq2
903bp
 PREDICTED:_WD_repeat-containing_protein_47_[Papilio_xuthus]
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005874 C microtubule
GO:0007275 P multicellular organism development
5793 O_BomoSK15214_complete:A_BomoSK_comp13660_c0_seq2
126bp
 hypothetical_protein_WN51_01244_[Melipona_quadrifasciata]
5794 O_BomoSK15215_complete:A_BomoSK_comp13660_c0_seq2
109bp
5795 O_BomoSK15216_5prime_partial:A_BomoSK_comp13660_c0_seq3
393bp
 PREDICTED:_WD_repeat-containing_protein_47_isoform_X3_[Amyelois_transitella]
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005874 C microtubule
GO:0007275 P multicellular organism development
5796 O_BomoSK15217_complete:A_BomoSK_comp13660_c0_seq3
109bp
5797 O_BomoSK15218_5prime_partial:A_BomoSK_comp13660_c0_seq5
296bp
 PREDICTED:_WD_repeat-containing_protein_47_isoform_X1_[Amyelois_transitella]
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005874 C microtubule
GO:0007275 P multicellular organism development
5798 O_BomoSK15219_complete:A_BomoSK_comp13660_c0_seq5
109bp
5799 O_BomoSK1521_5prime_partial:A_BomoSK_comp4335_c0_seq1
364bp
 putative_pol-like_protein_[Danaus_plexippus]
5800 O_BomoSK15220_complete:A_BomoSK_comp13661_c0_seq1
417bp
 PREDICTED:_protein_60A_[Amyelois_transitella]
GO:0005125 F cytokine activity
GO:0005160 F transforming growth factor beta receptor binding
GO:0005576 C extracellular region
GO:0005615 C extracellular space
GO:0007179 P transforming growth factor beta receptor signaling pathway
GO:0007274 P neuromuscular synaptic transmission
GO:0007275 P multicellular organism development
GO:0007391 P dorsal closure
GO:0007419 P ventral cord development
GO:0007474 P imaginal disc-derived wing vein specification
GO:0007528 P neuromuscular junction development
GO:0008083 F growth factor activity
GO:0008586 P imaginal disc-derived wing vein morphogenesis
GO:0010862 P positive regulation of pathway-restricted SMAD protein phosphorylation
GO:0012505 C endomembrane system
GO:0030509 P BMP signaling pathway
GO:0030707 P ovarian follicle cell development
GO:0031045 C dense core granule
GO:0035222 P wing disc pattern formation
GO:0036099 P female germ-line stem cell population maintenance
GO:0040007 P growth
GO:0042981 P regulation of apoptotic process
GO:0043408 P regulation of MAPK cascade
GO:0045887 P positive regulation of synaptic assembly at neuromuscular junction
GO:0046928 P regulation of neurotransmitter secretion
GO:0048636 P positive regulation of muscle organ development
GO:0060395 P SMAD protein signal transduction
GO:0070700 F BMP receptor binding
GO:0097467 C type III terminal bouton
GO:0099504 P synaptic vesicle cycle
5801 O_BomoSK15221_3prime_partial:A_BomoSK_comp13662_c0_seq1
1186bp
 PREDICTED:_proteasome_activator_complex_subunit_4-like_[Bombyx_mori]
GO:0000502 C proteasome complex
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006281 P DNA repair
GO:0006974 P cellular response to DNA damage stimulus
GO:0010499 P proteasomal ubiquitin-independent protein catabolic process
GO:0010952 P positive regulation of peptidase activity
GO:0016504 F peptidase activator activity
GO:0016607 C nuclear speck
GO:0035093 P spermatogenesis, exchange of chromosomal proteins
GO:0070577 F lysine-acetylated histone binding
GO:1990111 C spermatoproteasome complex
5802 O_BomoSK15222_5prime_partial:A_BomoSK_comp13662_c0_seq1
158bp
 conserved_Plasmodium_protein,_unknown_function_[Plasmodium_chabaudi_chabaudi]
5803 O_BomoSK15223_complete:A_BomoSK_comp13662_c0_seq1
131bp
 putative_exo-beta-1,3-glucanase_[Moniliophthora_roreri]
5804 O_BomoSK15224_3prime_partial:A_BomoSK_comp13662_c0_seq2
1229bp
 PREDICTED:_proteasome_activator_complex_subunit_4-like_[Bombyx_mori]
GO:0000502 C proteasome complex
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006281 P DNA repair
GO:0006974 P cellular response to DNA damage stimulus
GO:0010499 P proteasomal ubiquitin-independent protein catabolic process
GO:0010952 P positive regulation of peptidase activity
GO:0016504 F peptidase activator activity
GO:0016607 C nuclear speck
GO:0035093 P spermatogenesis, exchange of chromosomal proteins
GO:0070577 F lysine-acetylated histone binding
GO:1990111 C spermatoproteasome complex
5805 O_BomoSK15225_5prime_partial:A_BomoSK_comp13662_c0_seq2
158bp
 conserved_Plasmodium_protein,_unknown_function_[Plasmodium_chabaudi_chabaudi]
5806 O_BomoSK15226_complete:A_BomoSK_comp13662_c0_seq2
131bp
 putative_exo-beta-1,3-glucanase_[Moniliophthora_roreri]
5807 O_BomoSK15227_complete:A_BomoSK_comp13663_c0_seq1
533bp
 PREDICTED:_rab-like_protein_6_isoform_X2_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0005515 F protein binding
GO:0005525 F GTP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0007264 P small GTPase mediated signal transduction
GO:0015031 P protein transport
5808 O_BomoSK15228_complete:A_BomoSK_comp13663_c0_seq1
108bp
 unnamed_protein_product_[Oncorhynchus_mykiss]
5809 O_BomoSK15229_complete:A_BomoSK_comp13663_c0_seq2
588bp
 PREDICTED:_rab-like_protein_6_isoform_X2_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0005515 F protein binding
GO:0005525 F GTP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0007264 P small GTPase mediated signal transduction
GO:0015031 P protein transport
5810 O_BomoSK1522_3prime_partial:A_BomoSK_comp4336_c0_seq1
811bp
 PREDICTED:_5'-3'_exoribonuclease_1_isoform_X1_[Bombyx_mori]
GO:0000956 P nuclear-transcribed mRNA catabolic process
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003723 F RNA binding
GO:0004518 F nuclease activity
GO:0004527 F exonuclease activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0016020 C membrane
GO:0016075 P rRNA catabolic process
GO:0016787 F hydrolase activity
GO:0043488 P regulation of mRNA stability
GO:0044822 F RNA binding
GO:0045111 C intermediate filament cytoskeleton
GO:0071028 P nuclear mRNA surveillance
GO:0071044 P histone mRNA catabolic process
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
5811 O_BomoSK15230_complete:A_BomoSK_comp13663_c0_seq2
108bp
 unnamed_protein_product_[Oncorhynchus_mykiss]
5812 O_BomoSK15231_complete:A_BomoSK_comp13666_c0_seq1
1042bp
 Retrovirus-related_Pol_polyprotein_from_transposon_TNT_1-94_[Papilio_machaon]
GO:0003676 F nucleic acid binding
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004190 F aspartic-type endopeptidase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0008270 F zinc ion binding
GO:0015074 P DNA integration
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
5813 O_BomoSK15232_3prime_partial:A_BomoSK_comp13666_c0_seq1
207bp
 Retrovirus-related_Pol_polyprotein_from_transposon_TNT_1-94_[Papilio_machaon]
GO:0003676 F nucleic acid binding
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004190 F aspartic-type endopeptidase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0008270 F zinc ion binding
GO:0015074 P DNA integration
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
5814 O_BomoSK15233_5prime_partial:A_BomoSK_comp13667_c0_seq1
110bp
 endonuclease-reverse_transcriptase_[Bombyx_mori]
5815 O_BomoSK15234_3prime_partial:A_BomoSK_comp13668_c0_seq1
483bp
 PREDICTED:_protein-methionine_sulfoxide_oxidase_Mical_isoform_X4_[Bombyx_mori]
GO:0003779 F actin binding
GO:0004497 F monooxygenase activity
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0007015 P actin filament organization
GO:0007411 P axon guidance
GO:0007526 P larval somatic muscle development
GO:0008270 F zinc ion binding
GO:0016322 P neuron remodeling
GO:0016491 F oxidoreductase activity
GO:0016709 F oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen
GO:0019417 P sulfur oxidation
GO:0030042 P actin filament depolymerization
GO:0030047 P actin modification
GO:0043195 C terminal bouton
GO:0043914 F NADPH:sulfur oxidoreductase activity
GO:0045214 P sarcomere organization
GO:0046872 F metal ion binding
GO:0048813 P dendrite morphogenesis
GO:0055114 P obsolete oxidation-reduction process
GO:0060386 P synapse assembly involved in innervation
GO:0070995 P NADPH oxidation
GO:0071949 F FAD binding
GO:1904799 P regulation of neuron remodeling
5816 O_BomoSK15235_complete:A_BomoSK_comp13668_c0_seq1
164bp
 conserved_hypothetical_protein_[Neurospora_crassa]
5817 O_BomoSK15236_complete:A_BomoSK_comp13668_c0_seq2
1235bp
 PREDICTED:_protein-methionine_sulfoxide_oxidase_Mical_isoform_X4_[Bombyx_mori]
GO:0003779 F actin binding
GO:0004497 F monooxygenase activity
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0007015 P actin filament organization
GO:0007411 P axon guidance
GO:0007526 P larval somatic muscle development
GO:0008270 F zinc ion binding
GO:0016322 P neuron remodeling
GO:0016491 F oxidoreductase activity
GO:0016709 F oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen
GO:0019417 P sulfur oxidation
GO:0030042 P actin filament depolymerization
GO:0030047 P actin modification
GO:0043195 C terminal bouton
GO:0043914 F NADPH:sulfur oxidoreductase activity
GO:0045214 P sarcomere organization
GO:0046872 F metal ion binding
GO:0048813 P dendrite morphogenesis
GO:0055114 P obsolete oxidation-reduction process
GO:0060386 P synapse assembly involved in innervation
GO:0070995 P NADPH oxidation
GO:0071949 F FAD binding
GO:1904799 P regulation of neuron remodeling
5818 O_BomoSK15237_complete:A_BomoSK_comp13668_c0_seq2
183bp
5819 O_BomoSK15238_complete:A_BomoSK_comp13668_c0_seq2
153bp
5820 O_BomoSK15239_complete:A_BomoSK_comp13668_c0_seq2
105bp
 CRE-CUTL-9_protein_[Caenorhabditis_remanei]
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