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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
5731 O_BomoSK15159_5prime_partial:A_BomoSK_comp13650_c0_seq3
427bp
 PREDICTED:_uncharacterized_protein_LOC101744375_isoform_X2_[Bombyx_mori]
GO:0001666 P response to hypoxia
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016747 F acyltransferase activity, transferring groups other than amino-acyl groups
GO:0048471 C perinuclear region of cytoplasm
GO:1900038 P negative regulation of cellular response to hypoxia
5732 O_BomoSK1515_3prime_partial:A_BomoSK_comp4328_c0_seq1
560bp
 PREDICTED:_nucleoporin_NDC1_[Bombyx_mori]
GO:0005634 C nucleus
GO:0005643 C nuclear pore
GO:0005816 C spindle pole body
GO:0006810 P transport
GO:0006999 P nuclear pore organization
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0017056 F structural constituent of nuclear pore
GO:0030474 P spindle pole body duplication
GO:0031965 C nuclear membrane
GO:0051028 P mRNA transport
GO:0070762 C nuclear pore transmembrane ring
GO:0071790 P spindle pole body localization
5733 O_BomoSK15160_complete:A_BomoSK_comp13650_c0_seq3
134bp
5734 O_BomoSK15161_complete:A_BomoSK_comp13652_c0_seq1
362bp
 PREDICTED:_speckle-type_POZ_protein-like_[Plutella_xylostella]
GO:0016567 P protein ubiquitination
5735 O_BomoSK15162_complete:A_BomoSK_comp13652_c0_seq1
223bp
 PREDICTED:_casein_kinase_2_beta_subunit_isoform_X2_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005956 C protein kinase CK2 complex
GO:0016055 P Wnt signaling pathway
GO:0019887 F protein kinase regulator activity
GO:0031519 C PcG protein complex
GO:0045859 P regulation of protein kinase activity
GO:0046872 F metal ion binding
5736 O_BomoSK15163_complete:A_BomoSK_comp13652_c0_seq2
216bp
 PREDICTED:_casein_kinase_2_beta_subunit_isoform_X2_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005956 C protein kinase CK2 complex
GO:0016055 P Wnt signaling pathway
GO:0019887 F protein kinase regulator activity
GO:0031519 C PcG protein complex
GO:0045859 P regulation of protein kinase activity
GO:0046872 F metal ion binding
5737 O_BomoSK15164_5prime_partial:A_BomoSK_comp13652_c0_seq3
245bp
 PREDICTED:_casein_kinase_2_beta_subunit_isoform_X2_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005956 C protein kinase CK2 complex
GO:0016055 P Wnt signaling pathway
GO:0019887 F protein kinase regulator activity
GO:0031519 C PcG protein complex
GO:0045859 P regulation of protein kinase activity
GO:0046872 F metal ion binding
5738 O_BomoSK15165_complete:A_BomoSK_comp13652_c0_seq4
362bp
 PREDICTED:_speckle-type_POZ_protein-like_[Plutella_xylostella]
GO:0016567 P protein ubiquitination
5739 O_BomoSK15166_5prime_partial:A_BomoSK_comp13652_c0_seq4
252bp
 PREDICTED:_casein_kinase_2_beta_subunit_isoform_X2_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005956 C protein kinase CK2 complex
GO:0016055 P Wnt signaling pathway
GO:0019887 F protein kinase regulator activity
GO:0031519 C PcG protein complex
GO:0045859 P regulation of protein kinase activity
GO:0046872 F metal ion binding
5740 O_BomoSK15167_complete:A_BomoSK_comp13652_c0_seq5
362bp
 PREDICTED:_speckle-type_POZ_protein-like_[Plutella_xylostella]
GO:0016567 P protein ubiquitination
5741 O_BomoSK15168_complete:A_BomoSK_comp13652_c0_seq5
223bp
 PREDICTED:_casein_kinase_2_beta_subunit_isoform_X2_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005956 C protein kinase CK2 complex
GO:0016055 P Wnt signaling pathway
GO:0019887 F protein kinase regulator activity
GO:0031519 C PcG protein complex
GO:0045859 P regulation of protein kinase activity
GO:0046872 F metal ion binding
5742 O_BomoSK15169_complete:A_BomoSK_comp13652_c0_seq6
362bp
 PREDICTED:_speckle-type_POZ_protein-like_[Plutella_xylostella]
GO:0016567 P protein ubiquitination
5743 O_BomoSK1516_complete:A_BomoSK_comp4328_c0_seq1
138bp
5744 O_BomoSK15170_5prime_partial:A_BomoSK_comp13652_c0_seq6
257bp
 PREDICTED:_casein_kinase_2_beta_subunit_isoform_X1_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005956 C protein kinase CK2 complex
GO:0016055 P Wnt signaling pathway
GO:0019887 F protein kinase regulator activity
GO:0031519 C PcG protein complex
GO:0045859 P regulation of protein kinase activity
GO:0046872 F metal ion binding
5745 O_BomoSK15171_complete:A_BomoSK_comp13652_c0_seq7
221bp
 casein_kinase_2_beta_subunit_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005956 C protein kinase CK2 complex
GO:0016055 P Wnt signaling pathway
GO:0019887 F protein kinase regulator activity
GO:0031519 C PcG protein complex
GO:0045859 P regulation of protein kinase activity
GO:0046872 F metal ion binding
5746 O_BomoSK15172_5prime_partial:A_BomoSK_comp13652_c0_seq8
250bp
 casein_kinase_2_beta_subunit_[Bombyx_mori]
GO:0003682 F chromatin binding
GO:0005102 F signaling receptor binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0005956 C protein kinase CK2 complex
GO:0007249 P I-kappaB kinase/NF-kappaB signaling
GO:0008134 F transcription factor binding
GO:0010862 P positive regulation of pathway-restricted SMAD protein phosphorylation
GO:0016055 P Wnt signaling pathway
GO:0019887 F protein kinase regulator activity
GO:0019904 F protein domain specific binding
GO:0030177 P positive regulation of Wnt signaling pathway
GO:0031519 C PcG protein complex
GO:0032927 P positive regulation of activin receptor signaling pathway
GO:0033211 P adiponectin-activated signaling pathway
GO:0042802 F identical protein binding
GO:0043537 P negative regulation of blood vessel endothelial cell migration
GO:0045859 P regulation of protein kinase activity
GO:0046872 F metal ion binding
GO:0061154 P endothelial tube morphogenesis
GO:0070062 C extracellular exosome
5747 O_BomoSK15173_complete:A_BomoSK_comp13652_c0_seq9
362bp
 PREDICTED:_speckle-type_POZ_protein-like_[Plutella_xylostella]
GO:0016567 P protein ubiquitination
5748 O_BomoSK15174_5prime_partial:A_BomoSK_comp13652_c0_seq9
257bp
 PREDICTED:_casein_kinase_2_beta_subunit_isoform_X1_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005956 C protein kinase CK2 complex
GO:0016055 P Wnt signaling pathway
GO:0019887 F protein kinase regulator activity
GO:0031519 C PcG protein complex
GO:0045859 P regulation of protein kinase activity
GO:0046872 F metal ion binding
5749 O_BomoSK15175_complete:A_BomoSK_comp13652_c0_seq10
362bp
 PREDICTED:_speckle-type_POZ_protein-like_[Plutella_xylostella]
GO:0016567 P protein ubiquitination
5750 O_BomoSK15176_complete:A_BomoSK_comp13652_c0_seq10
228bp
 PREDICTED:_casein_kinase_2_beta_subunit_isoform_X1_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005956 C protein kinase CK2 complex
GO:0016055 P Wnt signaling pathway
GO:0019887 F protein kinase regulator activity
GO:0031519 C PcG protein complex
GO:0045859 P regulation of protein kinase activity
GO:0046872 F metal ion binding
5751 O_BomoSK15177_complete:A_BomoSK_comp13652_c0_seq11
362bp
 PREDICTED:_speckle-type_POZ_protein-like_[Plutella_xylostella]
GO:0016567 P protein ubiquitination
5752 O_BomoSK15178_5prime_partial:A_BomoSK_comp13652_c0_seq11
252bp
 PREDICTED:_casein_kinase_2_beta_subunit_isoform_X2_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005956 C protein kinase CK2 complex
GO:0016055 P Wnt signaling pathway
GO:0019887 F protein kinase regulator activity
GO:0031519 C PcG protein complex
GO:0045859 P regulation of protein kinase activity
GO:0046872 F metal ion binding
5753 O_BomoSK15179_complete:A_BomoSK_comp13652_c0_seq12
362bp
 PREDICTED:_speckle-type_POZ_protein-like_[Plutella_xylostella]
GO:0016567 P protein ubiquitination
5754 O_BomoSK1517_complete:A_BomoSK_comp4330_c0_seq1
294bp
 PREDICTED:_carboxy-terminal_domain_RNA_polymerase_II_polypeptide_A_small_phosphatase_1_[Amyelois_transitella]
GO:0001933 P negative regulation of protein phosphorylation
GO:0004721 F phosphoprotein phosphatase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0006470 P protein dephosphorylation
GO:0008420 F RNA polymerase II CTD heptapeptide repeat phosphatase activity
GO:0016787 F hydrolase activity
GO:0016791 F phosphatase activity
GO:0045665 P negative regulation of neuron differentiation
GO:0046872 F metal ion binding
GO:0050768 P negative regulation of neurogenesis
GO:0070062 C extracellular exosome
GO:2000134 P negative regulation of G1/S transition of mitotic cell cycle
5755 O_BomoSK15180_complete:A_BomoSK_comp13652_c0_seq12
228bp
 PREDICTED:_casein_kinase_2_beta_subunit_isoform_X1_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005956 C protein kinase CK2 complex
GO:0016055 P Wnt signaling pathway
GO:0019887 F protein kinase regulator activity
GO:0031519 C PcG protein complex
GO:0045859 P regulation of protein kinase activity
GO:0046872 F metal ion binding
5756 O_BomoSK15181_5prime_partial:A_BomoSK_comp13653_c0_seq1
349bp
 PREDICTED:_gastrula_zinc_finger_protein_XlCGF57.1-like_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007275 P multicellular organism development
GO:0008270 F zinc ion binding
GO:0030154 P cell differentiation
GO:0042802 F identical protein binding
GO:0045321 P leukocyte activation
GO:0046872 F metal ion binding
5757 O_BomoSK15182_5prime_partial:A_BomoSK_comp13653_c0_seq2
180bp
 PREDICTED:_gastrula_zinc_finger_protein_XlCGF57.1-like_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007010 P cytoskeleton organization
GO:0022604 P regulation of cell morphogenesis
GO:0046872 F metal ion binding
5758 O_BomoSK15183_5prime_partial:A_BomoSK_comp13653_c0_seq3
349bp
 PREDICTED:_gastrula_zinc_finger_protein_XlCGF57.1-like_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007275 P multicellular organism development
GO:0008270 F zinc ion binding
GO:0030154 P cell differentiation
GO:0042802 F identical protein binding
GO:0045321 P leukocyte activation
GO:0046872 F metal ion binding
5759 O_BomoSK15184_complete:A_BomoSK_comp13653_c0_seq3
252bp
 PREDICTED:_protein_SCO1_homolog,_mitochondrial_[Amyelois_transitella]
GO:0005507 F copper ion binding
GO:0005515 F protein binding
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0006091 P generation of precursor metabolites and energy
GO:0006825 P copper ion transport
GO:0006878 P cellular copper ion homeostasis
GO:0008535 P respiratory chain complex IV assembly
GO:0030016 C myofibril
GO:0046872 F metal ion binding
GO:0072492 C host cell mitochondrial intermembrane space
5760 O_BomoSK15185_complete:A_BomoSK_comp13653_c0_seq4
557bp
 PREDICTED:_zinc_finger_protein_62-like_isoform_X1_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
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