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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
5221 O_BomoSK146_5prime_partial:A_BomoSK_comp466_c0_seq1
154bp
 PREDICTED:_uridine-cytidine_kinase-like_1_isoform_X2_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004849 F uridine kinase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006206 P pyrimidine nucleobase metabolic process
GO:0008152 P metabolic process
GO:0016032 P viral process
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0043097 P pyrimidine nucleoside salvage
GO:0044206 P UMP salvage
GO:0044211 P CTP salvage
5222 O_BomoSK14700_complete:A_BomoSK_comp13583_c0_seq1
1047bp
 PREDICTED:_importin-7_isoform_X1_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005635 C nuclear envelope
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006606 P protein import into nucleus
GO:0006810 P transport
GO:0006886 P intracellular protein transport
GO:0007165 P signal transduction
GO:0008536 F small GTPase binding
GO:0008565 F obsolete protein transporter activity
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0042393 F histone binding
GO:0045087 P innate immune response
5223 O_BomoSK14701_complete:A_BomoSK_comp13583_c0_seq1
103bp
 hypothetical_protein_APR62_10285_[Smithella_sp._SDB]
5224 O_BomoSK14702_complete:A_BomoSK_comp13583_c0_seq2
203bp
 PREDICTED:_importin-7_isoform_X1_[Bombyx_mori]
GO:0005215 F transporter activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005643 C nuclear pore
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006606 P protein import into nucleus
GO:0006810 P transport
GO:0006886 P intracellular protein transport
GO:0007165 P signal transduction
GO:0008536 F small GTPase binding
GO:0008565 F obsolete protein transporter activity
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016032 P viral process
GO:0030695 F GTPase regulator activity
GO:0042393 F histone binding
GO:0045087 P innate immune response
GO:0050790 P regulation of catalytic activity
5225 O_BomoSK14703_5prime_partial:A_BomoSK_comp13584_c0_seq1
751bp
 PREDICTED:_probable_phosphorylase_b_kinase_regulatory_subunit_alpha_isoform_X2_[Bombyx_mori]
GO:0003824 F catalytic activity
GO:0004689 F phosphorylase kinase activity
GO:0005516 F calmodulin binding
GO:0005886 C plasma membrane
GO:0005964 C phosphorylase kinase complex
GO:0005975 P carbohydrate metabolic process
GO:0005977 P glycogen metabolic process
GO:0006468 P protein phosphorylation
GO:0008607 F phosphorylase kinase regulator activity
GO:0016020 C membrane
GO:0045859 P regulation of protein kinase activity
5226 O_BomoSK14704_5prime_partial:A_BomoSK_comp13584_c0_seq2
202bp
 PREDICTED:_probable_phosphorylase_b_kinase_regulatory_subunit_alpha_isoform_X2_[Bombyx_mori]
GO:0003824 F catalytic activity
GO:0004689 F phosphorylase kinase activity
GO:0005516 F calmodulin binding
GO:0005886 C plasma membrane
GO:0005964 C phosphorylase kinase complex
GO:0005975 P carbohydrate metabolic process
GO:0005977 P glycogen metabolic process
GO:0006468 P protein phosphorylation
GO:0008607 F phosphorylase kinase regulator activity
GO:0016020 C membrane
GO:0045859 P regulation of protein kinase activity
5227 O_BomoSK14705_internal:A_BomoSK_comp13584_c0_seq3
1056bp
 PREDICTED:_probable_phosphorylase_b_kinase_regulatory_subunit_alpha_isoform_X2_[Bombyx_mori]
GO:0003824 F catalytic activity
GO:0004689 F phosphorylase kinase activity
GO:0005516 F calmodulin binding
GO:0005886 C plasma membrane
GO:0005964 C phosphorylase kinase complex
GO:0005975 P carbohydrate metabolic process
GO:0005977 P glycogen metabolic process
GO:0006468 P protein phosphorylation
GO:0008607 F phosphorylase kinase regulator activity
GO:0016020 C membrane
GO:0045859 P regulation of protein kinase activity
5228 O_BomoSK14706_3prime_partial:A_BomoSK_comp13584_c0_seq4
159bp
 PREDICTED:_probable_phosphorylase_b_kinase_regulatory_subunit_alpha_isoform_X2_[Bombyx_mori]
GO:0003824 F catalytic activity
GO:0004689 F phosphorylase kinase activity
GO:0005516 F calmodulin binding
GO:0005886 C plasma membrane
GO:0005964 C phosphorylase kinase complex
GO:0005975 P carbohydrate metabolic process
GO:0005977 P glycogen metabolic process
GO:0006468 P protein phosphorylation
GO:0008607 F phosphorylase kinase regulator activity
GO:0016020 C membrane
GO:0045859 P regulation of protein kinase activity
5229 O_BomoSK14707_internal:A_BomoSK_comp13584_c0_seq5
492bp
 PREDICTED:_probable_phosphorylase_b_kinase_regulatory_subunit_alpha_isoform_X2_[Bombyx_mori]
GO:0003824 F catalytic activity
GO:0004689 F phosphorylase kinase activity
GO:0005516 F calmodulin binding
GO:0005886 C plasma membrane
GO:0005964 C phosphorylase kinase complex
GO:0005975 P carbohydrate metabolic process
GO:0005977 P glycogen metabolic process
GO:0006468 P protein phosphorylation
GO:0008607 F phosphorylase kinase regulator activity
GO:0016020 C membrane
GO:0045859 P regulation of protein kinase activity
5230 O_BomoSK14708_internal:A_BomoSK_comp13584_c0_seq6
507bp
 PREDICTED:_probable_phosphorylase_b_kinase_regulatory_subunit_alpha_isoform_X2_[Bombyx_mori]
GO:0003824 F catalytic activity
GO:0004689 F phosphorylase kinase activity
GO:0005516 F calmodulin binding
GO:0005886 C plasma membrane
GO:0005964 C phosphorylase kinase complex
GO:0005975 P carbohydrate metabolic process
GO:0005977 P glycogen metabolic process
GO:0006468 P protein phosphorylation
GO:0008607 F phosphorylase kinase regulator activity
GO:0016020 C membrane
GO:0045859 P regulation of protein kinase activity
5231 O_BomoSK14709_5prime_partial:A_BomoSK_comp13584_c0_seq7
751bp
 PREDICTED:_probable_phosphorylase_b_kinase_regulatory_subunit_alpha_isoform_X2_[Bombyx_mori]
GO:0003824 F catalytic activity
GO:0004689 F phosphorylase kinase activity
GO:0005516 F calmodulin binding
GO:0005886 C plasma membrane
GO:0005964 C phosphorylase kinase complex
GO:0005975 P carbohydrate metabolic process
GO:0005977 P glycogen metabolic process
GO:0006468 P protein phosphorylation
GO:0008607 F phosphorylase kinase regulator activity
GO:0016020 C membrane
GO:0045859 P regulation of protein kinase activity
5232 O_BomoSK1470_complete:A_BomoSK_comp4257_c0_seq1
497bp
 PREDICTED:_septin_and_tuftelin_interacting_protein_isoform_X1_[Bombyx_mori]
GO:0000390 P spliceosomal complex disassembly
GO:0000398 P mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0004004 F RNA helicase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005681 C spliceosomal complex
GO:0006355 P regulation of transcription, DNA-templated
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0071008 C U2-type post-mRNA release spliceosomal complex
GO:0071011 C precatalytic spliceosome
GO:0071013 C catalytic step 2 spliceosome
5233 O_BomoSK14710_internal:A_BomoSK_comp13584_c0_seq8
1056bp
 PREDICTED:_probable_phosphorylase_b_kinase_regulatory_subunit_alpha_isoform_X2_[Bombyx_mori]
GO:0003824 F catalytic activity
GO:0004689 F phosphorylase kinase activity
GO:0005516 F calmodulin binding
GO:0005886 C plasma membrane
GO:0005964 C phosphorylase kinase complex
GO:0005975 P carbohydrate metabolic process
GO:0005977 P glycogen metabolic process
GO:0006468 P protein phosphorylation
GO:0008607 F phosphorylase kinase regulator activity
GO:0016020 C membrane
GO:0045859 P regulation of protein kinase activity
5234 O_BomoSK14711_internal:A_BomoSK_comp13584_c0_seq9
1041bp
 PREDICTED:_probable_phosphorylase_b_kinase_regulatory_subunit_alpha_isoform_X2_[Bombyx_mori]
GO:0003824 F catalytic activity
GO:0004689 F phosphorylase kinase activity
GO:0005516 F calmodulin binding
GO:0005886 C plasma membrane
GO:0005964 C phosphorylase kinase complex
GO:0005975 P carbohydrate metabolic process
GO:0005977 P glycogen metabolic process
GO:0006468 P protein phosphorylation
GO:0008607 F phosphorylase kinase regulator activity
GO:0016020 C membrane
GO:0045859 P regulation of protein kinase activity
5235 O_BomoSK14712_internal:A_BomoSK_comp13584_c0_seq10
1041bp
 PREDICTED:_probable_phosphorylase_b_kinase_regulatory_subunit_alpha_isoform_X2_[Bombyx_mori]
GO:0003824 F catalytic activity
GO:0004689 F phosphorylase kinase activity
GO:0005516 F calmodulin binding
GO:0005886 C plasma membrane
GO:0005964 C phosphorylase kinase complex
GO:0005975 P carbohydrate metabolic process
GO:0005977 P glycogen metabolic process
GO:0006468 P protein phosphorylation
GO:0008607 F phosphorylase kinase regulator activity
GO:0016020 C membrane
GO:0045859 P regulation of protein kinase activity
5236 O_BomoSK14713_complete:A_BomoSK_comp13586_c0_seq1
106bp
 THAP_domain-containing_protein_9,_partial_[Harpegnathos_saltator]
5237 O_BomoSK14714_3prime_partial:A_BomoSK_comp13587_c0_seq1
319bp
 PREDICTED:_cell_division_cycle_5-like_protein_[Bombyx_mori]
GO:0000398 P mRNA splicing, via spliceosome
GO:0000974 C Prp19 complex
GO:0003677 F DNA binding
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005662 C DNA replication factor A complex
GO:0005681 C spliceosomal complex
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0006281 P DNA repair
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006397 P mRNA processing
GO:0006974 P cellular response to DNA damage stimulus
GO:0007049 P cell cycle
GO:0008380 P RNA splicing
GO:0016020 C membrane
GO:0016607 C nuclear speck
GO:0044822 F RNA binding
GO:0071013 C catalytic step 2 spliceosome
GO:0071987 F WD40-repeat domain binding
GO:0072422 P DNA damage checkpoint signaling
5238 O_BomoSK14715_5prime_partial:A_BomoSK_comp13588_c1_seq1
232bp
 PREDICTED:_nuclear_pore_glycoprotein_p62_isoform_X2_[Papilio_xuthus]
GO:0000922 C spindle pole
GO:0003682 F chromatin binding
GO:0005487 F structural constituent of nuclear pore
GO:0005515 F protein binding
GO:0005543 F phospholipid binding
GO:0005634 C nucleus
GO:0005635 C nuclear envelope
GO:0005642 C annulate lamellae
GO:0005643 C nuclear pore
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0006351 P transcription, DNA-templated
GO:0006405 P RNA export from nucleus
GO:0006406 P mRNA export from nucleus
GO:0006409 P tRNA export from nucleus
GO:0006606 P protein import into nucleus
GO:0006810 P transport
GO:0007067 P mitotic cell cycle
GO:0007077 P mitotic nuclear membrane disassembly
GO:0007166 P cell surface receptor signaling pathway
GO:0007283 P spermatogenesis
GO:0007569 P cell aging
GO:0008219 P cell death
GO:0008285 P negative regulation of cell population proliferation
GO:0009755 P hormone-mediated signaling pathway
GO:0009966 P regulation of signal transduction
GO:0010827 P regulation of glucose transmembrane transport
GO:0015031 P protein transport
GO:0016032 P viral process
GO:0016925 P protein sumoylation
GO:0017056 F structural constituent of nuclear pore
GO:0019083 P viral transcription
GO:0019894 F kinesin binding
GO:0030159 F signaling receptor complex adaptor activity
GO:0030529 C ribonucleoprotein complex
GO:0030544 F Hsp70 protein binding
GO:0031047 P gene silencing by RNA
GO:0031074 C nucleocytoplasmic transport complex
GO:0031965 C nuclear membrane
GO:0042059 P negative regulation of epidermal growth factor receptor signaling pathway
GO:0042169 F SH2 domain binding
GO:0042306 P regulation of protein import into nucleus
GO:0043066 P negative regulation of apoptotic process
GO:0043069 P negative regulation of programmed cell death
GO:0043123 P positive regulation of I-kappaB kinase/NF-kappaB signaling
GO:0043130 F ubiquitin binding
GO:0043231 C intracellular membrane-bounded organelle
GO:0043234 C protein-containing complex
GO:0043407 P negative regulation of MAP kinase activity
GO:0044613 C nuclear pore central transport channel
GO:0045742 P positive regulation of epidermal growth factor receptor signaling pathway
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0046578 P regulation of Ras protein signal transduction
GO:0046580 P negative regulation of Ras protein signal transduction
GO:0046930 C pore complex
GO:0046966 F thyroid hormone receptor binding
GO:0051028 P mRNA transport
GO:0051169 P nuclear transport
GO:0051425 F PTB domain binding
GO:0051879 F Hsp90 protein binding
GO:0070208 P protein heterotrimerization
GO:0071426 P obsolete ribonucleoprotein complex export from nucleus
GO:0075733 P intracellular transport of virus
GO:0090543 C Flemming body
GO:1900034 P regulation of cellular response to heat
5239 O_BomoSK14716_3prime_partial:A_BomoSK_comp13588_c1_seq3
450bp
 PREDICTED:_nuclear_pore_glycoprotein_p62_[Amyelois_transitella]
5240 O_BomoSK14717_complete:A_BomoSK_comp13588_c1_seq3
121bp
 hypothetical_protein_[Pseudonocardia_acaciae]
5241 O_BomoSK14718_internal:A_BomoSK_comp13588_c1_seq4
121bp
 Nucleoporin_p58/p45_[Zootermopsis_nevadensis]
5242 O_BomoSK14719_complete:A_BomoSK_comp13590_c0_seq1
114bp
 oxidoreductase_[Micromonospora_sp._HK10]
5243 O_BomoSK1471_5prime_partial:A_BomoSK_comp4262_c0_seq1
114bp
 PREDICTED:_mod(mdg4)-heS00531_isoform_X3_[Bombyx_mori]
5244 O_BomoSK14720_complete:A_BomoSK_comp13590_c2_seq1
240bp
 PREDICTED:_circadian_clock-controlled_protein-like_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0005615 C extracellular space
GO:0007623 P circadian rhythm
GO:0032504 P multicellular organism reproduction
GO:0048511 P rhythmic process
5245 O_BomoSK14721_5prime_partial:A_BomoSK_comp13590_c2_seq2
717bp
 PREDICTED:_titin_isoform_X2_[Papilio_machaon]
5246 O_BomoSK14722_complete:A_BomoSK_comp13590_c2_seq2
240bp
 PREDICTED:_circadian_clock-controlled_protein-like_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0005615 C extracellular space
GO:0007623 P circadian rhythm
GO:0032504 P multicellular organism reproduction
GO:0048511 P rhythmic process
5247 O_BomoSK14723_3prime_partial:A_BomoSK_comp13590_c2_seq2
177bp
 Hypothetical_protein_GLP15_1514_[Giardia_lamblia_P15]
5248 O_BomoSK14724_complete:A_BomoSK_comp13590_c2_seq2
117bp
 tRNA_threonylcarbamoyladenosine_biosynthesis_protein_TsaB_[Rhodococcus_sp._B7740]
5249 O_BomoSK14725_5prime_partial:A_BomoSK_comp13590_c2_seq3
731bp
 PREDICTED:_titin_isoform_X1_[Papilio_machaon]
5250 O_BomoSK14726_complete:A_BomoSK_comp13590_c2_seq3
240bp
 PREDICTED:_circadian_clock-controlled_protein-like_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0005615 C extracellular space
GO:0007623 P circadian rhythm
GO:0032504 P multicellular organism reproduction
GO:0048511 P rhythmic process
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