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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
4981 O_BomoSK14484_3prime_partial:A_BomoSK_comp13542_c0_seq2
882bp
 PREDICTED:_BAH_and_coiled-coil_domain-containing_protein_1_isoform_X3_[Amyelois_transitella]
GO:0000785 C chromatin
GO:0000976 F transcription cis-regulatory region binding
GO:0003682 F chromatin binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005677 C chromatin silencing complex
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0006342 P heterochromatin assembly
GO:0031507 P heterochromatin assembly
GO:0031965 C nuclear membrane
4982 O_BomoSK14485_complete:A_BomoSK_comp13542_c0_seq2
529bp
 PREDICTED:_BAH_and_coiled-coil_domain-containing_protein_1_isoform_X3_[Amyelois_transitella]
4983 O_BomoSK14486_complete:A_BomoSK_comp13542_c0_seq2
225bp
 hypothetical_protein_[Myroides_odoratimimus]
4984 O_BomoSK14487_complete:A_BomoSK_comp13542_c0_seq2
195bp
 Uncharacterised_protein_[Salmonella_enterica_subsp._enterica_serovar_Bovismorbificans]
4985 O_BomoSK14488_complete:A_BomoSK_comp13542_c0_seq2
148bp
4986 O_BomoSK14489_5prime_partial:A_BomoSK_comp13542_c0_seq2
139bp
 hypothetical_protein_[Lysobacter_enzymogenes]
4987 O_BomoSK1448_5prime_partial:A_BomoSK_comp4234_c0_seq1
120bp
 hypothetical_protein_[Streptomyces_albus]
4988 O_BomoSK14490_5prime_partial:A_BomoSK_comp13542_c0_seq2
100bp
 PREDICTED:_proline-rich_protein_36-like_[Orussus_abietinus]
4989 O_BomoSK14491_complete:A_BomoSK_comp13543_c0_seq1
241bp
 PREDICTED:_protein_twisted_gastrulation-like_[Papilio_xuthus]
GO:0005576 C extracellular region
GO:0007275 P multicellular organism development
GO:0007354 P zygotic determination of anterior/posterior axis, embryo
GO:0007362 P terminal region determination
GO:0008201 F heparin binding
GO:0008293 P torso signaling pathway
GO:0010629 P negative regulation of gene expression
GO:0017015 P regulation of transforming growth factor beta receptor signaling pathway
GO:0030510 P regulation of BMP signaling pathway
GO:0045165 P cell fate commitment
4990 O_BomoSK14492_complete:A_BomoSK_comp13544_c0_seq1
597bp
 PREDICTED:_uncharacterized_protein_LOC101739643_isoform_X2_[Bombyx_mori]
4991 O_BomoSK14493_complete:A_BomoSK_comp13544_c0_seq1
184bp
 hypothetical_protein_[Curvibacter_sp._PAE-UM]
4992 O_BomoSK14494_complete:A_BomoSK_comp13544_c0_seq1
156bp
 PREDICTED:_uncharacterized_protein_LOC101739643_isoform_X2_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000228 C nuclear chromosome
GO:0000781 C chromosome, telomeric region
GO:0000784 C chromosome, telomeric region
GO:0000792 C heterochromatin
GO:0003677 F DNA binding
GO:0003682 F chromatin binding
GO:0004386 F helicase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0005721 C pericentric heterochromatin
GO:0006281 P DNA repair
GO:0006334 P nucleosome assembly
GO:0006336 P DNA replication-independent chromatin assembly
GO:0006338 P chromatin remodeling
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006974 P cellular response to DNA damage stimulus
GO:0007283 P spermatogenesis
GO:0010571 P positive regulation of nuclear cell cycle DNA replication
GO:0015616 F DNA translocase activity
GO:0016568 P chromatin organization
GO:0016605 C PML body
GO:0016787 F hydrolase activity
GO:0030330 P DNA damage response, signal transduction by p53 class mediator
GO:0030900 P forebrain development
GO:0031297 P replication fork processing
GO:0031933 C obsolete telomeric heterochromatin
GO:0032206 P positive regulation of telomere maintenance
GO:0035064 F methylated histone binding
GO:0035128 P post-embryonic forelimb morphogenesis
GO:0035264 P multicellular organism growth
GO:0042393 F histone binding
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046872 F metal ion binding
GO:0060009 P Sertoli cell development
GO:0070087 F chromo shadow domain binding
GO:0070198 P protein localization to chromosome, telomeric region
GO:0070603 C SWI/SNF superfamily-type complex
GO:0072520 P seminiferous tubule development
GO:0072711 P cellular response to hydroxyurea
GO:1901581 P negative regulation of telomeric RNA transcription from RNA pol II promoter
GO:1901582 P positive regulation of telomeric RNA transcription from RNA pol II promoter
GO:1904908 P negative regulation of maintenance of mitotic sister chromatid cohesion, telomeric
GO:1990707 C chromosome, subtelomeric region
4993 O_BomoSK14495_complete:A_BomoSK_comp13544_c0_seq1
125bp
4994 O_BomoSK14496_complete:A_BomoSK_comp13544_c0_seq2
914bp
 PREDICTED:_uncharacterized_protein_LOC101739643_isoform_X2_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000781 C chromosome, telomeric region
GO:0003677 F DNA binding
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0006281 P DNA repair
GO:0006334 P nucleosome assembly
GO:0006336 P DNA replication-independent chromatin assembly
GO:0006338 P chromatin remodeling
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006974 P cellular response to DNA damage stimulus
GO:0010571 P positive regulation of nuclear cell cycle DNA replication
GO:0016568 P chromatin organization
GO:0016605 C PML body
GO:0016787 F hydrolase activity
GO:0030330 P DNA damage response, signal transduction by p53 class mediator
GO:0031297 P replication fork processing
GO:0031933 C obsolete telomeric heterochromatin
GO:0032206 P positive regulation of telomere maintenance
GO:0042393 F histone binding
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046872 F metal ion binding
GO:0070603 C SWI/SNF superfamily-type complex
GO:0072711 P cellular response to hydroxyurea
GO:1901581 P negative regulation of telomeric RNA transcription from RNA pol II promoter
4995 O_BomoSK14497_complete:A_BomoSK_comp13544_c0_seq2
184bp
 hypothetical_protein_[Curvibacter_sp._PAE-UM]
4996 O_BomoSK14498_complete:A_BomoSK_comp13544_c0_seq2
125bp
4997 O_BomoSK14499_complete:A_BomoSK_comp13546_c0_seq2
160bp
 PREDICTED:_zinc_finger_protein_729-like_isoform_X1_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
4998 O_BomoSK1449_complete:A_BomoSK_comp4236_c0_seq1
907bp
 PREDICTED:_zinc_finger_protein_600-like_[Amyelois_transitella]
GO:0003674 F molecular_function
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0005575 C cellular_component
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008150 P biological_process
GO:0046872 F metal ion binding
4999 O_BomoSK144_5prime_partial:A_BomoSK_comp451_c1_seq1
124bp
 hypothetical_protein_[Salinispora_pacifica]
5000 O_BomoSK14500_complete:A_BomoSK_comp13546_c0_seq4
316bp
 PREDICTED:_zinc_finger_protein_729-like_isoform_X2_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
GO:0071333 P cellular response to glucose stimulus
5001 O_BomoSK14501_complete:A_BomoSK_comp13546_c0_seq5
452bp
 PREDICTED:_zinc_finger_protein_729-like_isoform_X2_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
5002 O_BomoSK14502_complete:A_BomoSK_comp13546_c0_seq6
160bp
 PREDICTED:_zinc_finger_protein_729-like_isoform_X1_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
5003 O_BomoSK14503_internal:A_BomoSK_comp13547_c0_seq1
503bp
 PREDICTED:_uncharacterized_histidine-rich_protein_DDB_G0274557-like_[Bombyx_mori]
5004 O_BomoSK14504_3prime_partial:A_BomoSK_comp13547_c0_seq1
249bp
 PREDICTED:_uncharacterized_protein_LOC106061371,_partial_[Biomphalaria_glabrata]
5005 O_BomoSK14505_complete:A_BomoSK_comp13548_c1_seq1
293bp
 PREDICTED:_RING_finger_protein_121_isoform_X2_[Papilio_xuthus]
GO:0008270 F zinc ion binding
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0046872 F metal ion binding
5006 O_BomoSK14506_complete:A_BomoSK_comp13548_c1_seq3
317bp
 PREDICTED:_RING_finger_protein_121_isoform_X2_[Papilio_xuthus]
GO:0008270 F zinc ion binding
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0046872 F metal ion binding
5007 O_BomoSK14507_complete:A_BomoSK_comp13548_c1_seq3
104bp
5008 O_BomoSK14508_complete:A_BomoSK_comp13548_c1_seq4
293bp
 PREDICTED:_RING_finger_protein_121_isoform_X2_[Papilio_xuthus]
GO:0008270 F zinc ion binding
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0046872 F metal ion binding
5009 O_BomoSK14509_complete:A_BomoSK_comp13548_c1_seq5
317bp
 PREDICTED:_RING_finger_protein_121_isoform_X2_[Papilio_xuthus]
GO:0008270 F zinc ion binding
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0046872 F metal ion binding
5010 O_BomoSK1450_3prime_partial:A_BomoSK_comp4237_c0_seq1
556bp
 PREDICTED:_mitogen-activated_protein_kinase_kinase_kinase_4,_partial_[Bombyx_mori]
GO:0000165 P MAPK cascade
GO:0000166 F nucleotide binding
GO:0000186 P obsolete activation of MAPKK activity
GO:0001890 P placenta development
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0004702 F obsolete signal transducer, downstream of receptor, with serine/threonine kinase activity
GO:0004709 F MAP kinase kinase kinase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0006468 P protein phosphorylation
GO:0010225 P response to UV-C
GO:0010468 P regulation of gene expression
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0019100 P male germ-line sex determination
GO:0032212 P positive regulation of telomere maintenance via telomerase
GO:0035556 P intracellular signal transduction
GO:0043507 P positive regulation of JUN kinase activity
GO:0046872 F metal ion binding
GO:0048263 P determination of dorsal identity
GO:0048471 C perinuclear region of cytoplasm
GO:0051973 P positive regulation of telomerase activity
GO:0060718 P chorionic trophoblast cell differentiation
GO:1900745 P positive regulation of p38MAPK cascade
GO:1904355 P positive regulation of telomere capping
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