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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
4951 O_BomoSK14457_complete:A_BomoSK_comp13527_c0_seq1
113bp
 cobalt-zinc-cadmium_resistance_protein_CzcB_[Candidatus_Scalindua_brodae]
4952 O_BomoSK14458_complete:A_BomoSK_comp13527_c0_seq2
1204bp
 PREDICTED:_uncharacterized_protein_LOC101736416_isoform_X1_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0005815 C microtubule organizing center
GO:0005819 C spindle
GO:0005856 C cytoskeleton
GO:0008017 F microtubule binding
GO:0016020 C membrane
GO:0034453 P microtubule anchoring
4953 O_BomoSK14459_complete:A_BomoSK_comp13527_c0_seq2
269bp
4954 O_BomoSK1445_3prime_partial:A_BomoSK_comp4230_c0_seq1
314bp
 PREDICTED:_insulin_gene_enhancer_protein_ISL-1_[Bombyx_mori]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000978 F RNA polymerase II cis-regulatory region sequence-specific DNA binding
GO:0001077 F DNA-binding transcription activator activity, RNA polymerase II-specific
GO:0001102 F RNA polymerase II-specific DNA-binding transcription factor binding
GO:0001105 F transcription coactivator activity
GO:0001158 F cis-regulatory region sequence-specific DNA binding
GO:0001755 P neural crest cell migration
GO:0003007 P heart morphogenesis
GO:0003139 P secondary heart field specification
GO:0003148 P outflow tract septum morphogenesis
GO:0003151 P outflow tract morphogenesis
GO:0003203 P endocardial cushion morphogenesis
GO:0003215 P cardiac right ventricle morphogenesis
GO:0003266 P regulation of secondary heart field cardioblast proliferation
GO:0003677 F DNA binding
GO:0003682 F chromatin binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0006355 P regulation of transcription, DNA-templated
GO:0006366 P transcription by RNA polymerase II
GO:0007275 P multicellular organism development
GO:0007507 P heart development
GO:0008270 F zinc ion binding
GO:0008284 P positive regulation of cell population proliferation
GO:0010468 P regulation of gene expression
GO:0010575 P positive regulation of vascular endothelial growth factor production
GO:0016922 F nuclear receptor binding
GO:0021520 P spinal cord motor neuron cell fate specification
GO:0021522 P spinal cord motor neuron differentiation
GO:0021524 P visceral motor neuron differentiation
GO:0021559 P trigeminal nerve development
GO:0021983 P pituitary gland development
GO:0030182 P neuron differentiation
GO:0030331 F estrogen receptor binding
GO:0031016 P pancreas development
GO:0031103 P axon regeneration
GO:0031290 P retinal ganglion cell axon guidance
GO:0032024 P positive regulation of insulin secretion
GO:0032725 P positive regulation of granulocyte macrophage colony-stimulating factor production
GO:0032729 P positive regulation of interferon-gamma production
GO:0032730 P positive regulation of interleukin-1 alpha production
GO:0032731 P positive regulation of interleukin-1 beta production
GO:0032735 P positive regulation of interleukin-12 production
GO:0032755 P positive regulation of interleukin-6 production
GO:0032760 P positive regulation of tumor necrosis factor production
GO:0033147 P negative regulation of intracellular estrogen receptor signaling pathway
GO:0035066 P positive regulation of histone acetylation
GO:0042517 P positive regulation of tyrosine phosphorylation of STAT protein
GO:0043388 P positive regulation of DNA binding
GO:0043425 F bHLH transcription factor binding
GO:0043524 P negative regulation of neuron apoptotic process
GO:0043565 F sequence-specific DNA binding
GO:0045665 P negative regulation of neuron differentiation
GO:0045766 P positive regulation of angiogenesis
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046872 F metal ion binding
GO:0048663 P neuron fate commitment
GO:0048665 P neuron fate specification
GO:0048762 P mesenchymal cell differentiation
GO:0048880 P sensory system development
GO:0048935 P peripheral nervous system neuron development
GO:0048936 P peripheral nervous system neuron axonogenesis
GO:0050728 P negative regulation of inflammatory response
GO:0055010 P ventricular cardiac muscle tissue morphogenesis
GO:0060037 P pharyngeal system development
GO:0060379 P cardiac muscle cell myoblast differentiation
GO:0060384 P innervation
GO:0060413 P atrial septum morphogenesis
GO:0060913 P cardiac cell fate determination
GO:0071385 P cellular response to glucocorticoid stimulus
GO:0071657 P positive regulation of granulocyte colony-stimulating factor production
GO:0090074 P negative regulation of protein homodimerization activity
GO:0090090 P negative regulation of canonical Wnt signaling pathway
GO:1901258 P positive regulation of macrophage colony-stimulating factor production
4955 O_BomoSK14460_complete:A_BomoSK_comp13527_c0_seq2
114bp
 hypothetical_protein_APF81_10385_[Desulfosporosinus_sp._BRH_c37]
4956 O_BomoSK14461_complete:A_BomoSK_comp13527_c0_seq2
113bp
 cobalt-zinc-cadmium_resistance_protein_CzcB_[Candidatus_Scalindua_brodae]
4957 O_BomoSK14462_complete:A_BomoSK_comp13528_c0_seq1
766bp
 furin-like_convetase_precursor_[Bombyx_mori]
GO:0000139 C Golgi membrane
GO:0001941 P postsynaptic membrane organization
GO:0004252 F serine-type endopeptidase activity
GO:0005794 C Golgi apparatus
GO:0005795 C Golgi stack
GO:0005886 C plasma membrane
GO:0006508 P proteolysis
GO:0008039 P synaptic target recognition
GO:0008233 F peptidase activity
GO:0008236 F serine-type peptidase activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016485 P protein processing
GO:0016787 F hydrolase activity
GO:0030173 C integral component of Golgi membrane
GO:0097090 P presynaptic membrane organization
GO:0097688 P glutamate receptor clustering
4958 O_BomoSK14463_complete:A_BomoSK_comp13528_c0_seq2
766bp
 furin-like_convetase_precursor_[Bombyx_mori]
GO:0000139 C Golgi membrane
GO:0001941 P postsynaptic membrane organization
GO:0004252 F serine-type endopeptidase activity
GO:0005794 C Golgi apparatus
GO:0005795 C Golgi stack
GO:0005886 C plasma membrane
GO:0006508 P proteolysis
GO:0008039 P synaptic target recognition
GO:0008233 F peptidase activity
GO:0008236 F serine-type peptidase activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016485 P protein processing
GO:0016787 F hydrolase activity
GO:0030173 C integral component of Golgi membrane
GO:0097090 P presynaptic membrane organization
GO:0097688 P glutamate receptor clustering
4959 O_BomoSK14464_complete:A_BomoSK_comp13528_c0_seq3
766bp
 furin-like_convetase_precursor_[Bombyx_mori]
GO:0000139 C Golgi membrane
GO:0001941 P postsynaptic membrane organization
GO:0004252 F serine-type endopeptidase activity
GO:0005794 C Golgi apparatus
GO:0005795 C Golgi stack
GO:0005886 C plasma membrane
GO:0006508 P proteolysis
GO:0008039 P synaptic target recognition
GO:0008233 F peptidase activity
GO:0008236 F serine-type peptidase activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016485 P protein processing
GO:0016787 F hydrolase activity
GO:0030173 C integral component of Golgi membrane
GO:0097090 P presynaptic membrane organization
GO:0097688 P glutamate receptor clustering
4960 O_BomoSK14465_complete:A_BomoSK_comp13530_c0_seq1
149bp
 PREDICTED:_uncharacterized_protein_LOC106133979_isoform_X1_[Amyelois_transitella]
4961 O_BomoSK14466_complete:A_BomoSK_comp13531_c0_seq1
311bp
 PREDICTED:_dehydrogenase/reductase_SDR_family_protein_7-like_[Amyelois_transitella]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0005777 C peroxisome
GO:0005778 C peroxisomal membrane
GO:0008150 P biological_process
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016491 F oxidoreductase activity
GO:0055114 P obsolete oxidation-reduction process
4962 O_BomoSK14467_complete:A_BomoSK_comp13531_c0_seq2
100bp
 PREDICTED:_dehydrogenase/reductase_SDR_family_protein_7-like_isoform_X2_[Papilio_xuthus]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0005777 C peroxisome
GO:0005778 C peroxisomal membrane
GO:0008150 P biological_process
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016491 F oxidoreductase activity
GO:0055114 P obsolete oxidation-reduction process
4963 O_BomoSK14468_complete:A_BomoSK_comp13532_c0_seq1
196bp
 PREDICTED:_ubiquitin-conjugating_enzyme_E2_H_[Papilio_xuthus]
GO:0000166 F nucleotide binding
GO:0004842 F ubiquitin-protein transferase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0016567 P protein ubiquitination
GO:0016740 F transferase activity
GO:0031625 F ubiquitin protein ligase binding
GO:0043161 P proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0061630 F ubiquitin protein ligase activity
GO:0061631 F ubiquitin conjugating enzyme activity
GO:0070936 P protein K48-linked ubiquitination
GO:0070979 P protein K11-linked ubiquitination
4964 O_BomoSK14469_complete:A_BomoSK_comp13533_c0_seq1
105bp
 glycosyltransferase_group_2_family_protein_[Firmicutes_bacterium_CAG:345]
4965 O_BomoSK1446_complete:A_BomoSK_comp4231_c0_seq1
128bp
 putative_histone-fold_protein_CHRAC_subunit_[Danaus_plexippus]
GO:0003677 F DNA binding
GO:0003887 F DNA-directed DNA polymerase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006338 P chromatin remodeling
GO:0008152 P metabolic process
GO:0008622 C epsilon DNA polymerase complex
GO:0008623 C CHRAC
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0046982 F protein heterodimerization activity
GO:0071897 P DNA biosynthetic process
4966 O_BomoSK14470_complete:A_BomoSK_comp13535_c0_seq1
210bp
 RPA43_N_protein_[Bombyx_mori]
GO:0001054 F RNA polymerase I activity
GO:0003899 F DNA-directed 5'-3' RNA polymerase activity
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0005736 C RNA polymerase I complex
GO:0006351 P transcription, DNA-templated
GO:0006361 P transcription initiation from RNA polymerase I promoter
GO:0006362 P transcription elongation from RNA polymerase I promoter
GO:0006363 P termination of RNA polymerase I transcription
GO:0015630 C microtubule cytoskeleton
GO:0045815 P epigenetic maintenance of chromatin in transcription-competent conformation
4967 O_BomoSK14471_complete:A_BomoSK_comp13536_c0_seq1
596bp
 PREDICTED:_uncharacterized_protein_LOC101737920_[Bombyx_mori]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007507 P heart development
4968 O_BomoSK14472_3prime_partial:A_BomoSK_comp13540_c0_seq1
281bp
 Zinc_finger_protein-like_1-like_[Papilio_xuthus]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
GO:0008270 F zinc ion binding
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0046872 F metal ion binding
4969 O_BomoSK14473_complete:A_BomoSK_comp13540_c0_seq2
611bp
 PREDICTED:_tubulin--tyrosine_ligase-like_protein_12_[Plutella_xylostella]
GO:0000166 F nucleotide binding
GO:0003674 F molecular_function
GO:0005524 F ATP binding
GO:0005575 C cellular_component
GO:0006464 P cellular protein modification process
GO:0008150 P biological_process
4970 O_BomoSK14474_complete:A_BomoSK_comp13540_c0_seq2
314bp
 PREDICTED:_zinc_finger_protein-like_1_homolog_[Papilio_polytes]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
GO:0008270 F zinc ion binding
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0046872 F metal ion binding
4971 O_BomoSK14475_5prime_partial:A_BomoSK_comp13541_c1_seq2
237bp
 PREDICTED:_methionine_aminopeptidase_1D,_mitochondrial_isoform_X1_[Bombyx_mori]
GO:0004177 F aminopeptidase activity
GO:0005739 C mitochondrion
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0008235 F metalloexopeptidase activity
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
4972 O_BomoSK14476_5prime_partial:A_BomoSK_comp13541_c1_seq4
103bp
 PREDICTED:_methionine_aminopeptidase_1D,_mitochondrial_isoform_X1_[Bombyx_mori]
GO:0004177 F aminopeptidase activity
GO:0005739 C mitochondrion
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0008235 F metalloexopeptidase activity
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
4973 O_BomoSK14477_3prime_partial:A_BomoSK_comp13542_c0_seq1
882bp
 PREDICTED:_BAH_and_coiled-coil_domain-containing_protein_1_isoform_X3_[Amyelois_transitella]
GO:0000785 C chromatin
GO:0000976 F transcription cis-regulatory region binding
GO:0003682 F chromatin binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005677 C chromatin silencing complex
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0006342 P heterochromatin assembly
GO:0031507 P heterochromatin assembly
GO:0031965 C nuclear membrane
4974 O_BomoSK14478_complete:A_BomoSK_comp13542_c0_seq1
443bp
 PREDICTED:_BAH_and_coiled-coil_domain-containing_protein_1_isoform_X3_[Amyelois_transitella]
4975 O_BomoSK14479_complete:A_BomoSK_comp13542_c0_seq1
225bp
 hypothetical_protein_[Myroides_odoratimimus]
4976 O_BomoSK1447_3prime_partial:A_BomoSK_comp4234_c0_seq1
337bp
 PREDICTED:_death_associated_protein_kinase_isoform_X1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0002009 P morphogenesis of an epithelium
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0005524 F ATP binding
GO:0005575 C cellular_component
GO:0005634 C nucleus
GO:0006468 P protein phosphorylation
GO:0007155 P cell adhesion
GO:0007476 P imaginal disc-derived wing morphogenesis
GO:0007480 P imaginal disc-derived leg morphogenesis
GO:0008360 P regulation of cell shape
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0040018 P positive regulation of multicellular organism growth
4977 O_BomoSK14480_complete:A_BomoSK_comp13542_c0_seq1
195bp
 Uncharacterised_protein_[Salmonella_enterica_subsp._enterica_serovar_Bovismorbificans]
4978 O_BomoSK14481_complete:A_BomoSK_comp13542_c0_seq1
148bp
4979 O_BomoSK14482_5prime_partial:A_BomoSK_comp13542_c0_seq1
139bp
 hypothetical_protein_[Lysobacter_enzymogenes]
4980 O_BomoSK14483_5prime_partial:A_BomoSK_comp13542_c0_seq1
100bp
 PREDICTED:_proline-rich_protein_36-like_[Orussus_abietinus]
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