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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
4411 O_BomoSK13971_complete:A_BomoSK_comp13422_c0_seq2
106bp
4412 O_BomoSK13972_3prime_partial:A_BomoSK_comp13423_c0_seq1
421bp
 PREDICTED:_maternal_protein_pumilio-like_[Bombyx_mori]
GO:0000288 P nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay
GO:0000900 F translation repressor activity, mRNA regulatory element binding
GO:0001709 P cell fate determination
GO:0003723 F RNA binding
GO:0003730 F mRNA 3'-UTR binding
GO:0005635 C nuclear envelope
GO:0005737 C cytoplasm
GO:0006417 P regulation of translation
GO:0007067 P mitotic cell cycle
GO:0007268 P chemical synaptic transmission
GO:0007275 P multicellular organism development
GO:0007280 P pole cell migration
GO:0007281 P germ cell development
GO:0007616 P long-term memory
GO:0008258 P head involution
GO:0008582 P regulation of synaptic assembly at neuromuscular junction
GO:0008595 P anterior/posterior axis specification, embryo
GO:0016441 P posttranscriptional gene silencing
GO:0016477 P cell migration
GO:0017148 P negative regulation of translation
GO:0031594 C neuromuscular junction
GO:0042059 P negative regulation of epidermal growth factor receptor signaling pathway
GO:0042078 P germ-line stem cell division
GO:0045727 P positive regulation of translation
GO:0045786 P negative regulation of cell cycle
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0048149 P behavioral response to ethanol
GO:0048477 P oogenesis
GO:0048813 P dendrite morphogenesis
GO:0050804 P modulation of chemical synaptic transmission
GO:0060213 P positive regulation of nuclear-transcribed mRNA poly(A) tail shortening
GO:0061176 C type Ib terminal bouton
GO:0061177 C type Is terminal bouton
GO:0097482 C muscle cell postsynaptic specialization
4413 O_BomoSK13973_3prime_partial:A_BomoSK_comp13423_c0_seq2
412bp
 PREDICTED:_maternal_protein_pumilio-like_[Bombyx_mori]
GO:0000288 P nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay
GO:0000900 F translation repressor activity, mRNA regulatory element binding
GO:0001709 P cell fate determination
GO:0003723 F RNA binding
GO:0003730 F mRNA 3'-UTR binding
GO:0005635 C nuclear envelope
GO:0005737 C cytoplasm
GO:0006417 P regulation of translation
GO:0007067 P mitotic cell cycle
GO:0007268 P chemical synaptic transmission
GO:0007275 P multicellular organism development
GO:0007280 P pole cell migration
GO:0007281 P germ cell development
GO:0007616 P long-term memory
GO:0008258 P head involution
GO:0008582 P regulation of synaptic assembly at neuromuscular junction
GO:0008595 P anterior/posterior axis specification, embryo
GO:0016441 P posttranscriptional gene silencing
GO:0016477 P cell migration
GO:0017148 P negative regulation of translation
GO:0031594 C neuromuscular junction
GO:0042059 P negative regulation of epidermal growth factor receptor signaling pathway
GO:0042078 P germ-line stem cell division
GO:0045727 P positive regulation of translation
GO:0045786 P negative regulation of cell cycle
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0048149 P behavioral response to ethanol
GO:0048477 P oogenesis
GO:0048813 P dendrite morphogenesis
GO:0050804 P modulation of chemical synaptic transmission
GO:0060213 P positive regulation of nuclear-transcribed mRNA poly(A) tail shortening
GO:0061176 C type Ib terminal bouton
GO:0061177 C type Is terminal bouton
GO:0097482 C muscle cell postsynaptic specialization
4414 O_BomoSK13974_5prime_partial:A_BomoSK_comp13423_c0_seq2
130bp
4415 O_BomoSK13975_3prime_partial:A_BomoSK_comp13423_c0_seq3
417bp
 PREDICTED:_maternal_protein_pumilio-like_[Bombyx_mori]
GO:0000288 P nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay
GO:0000900 F translation repressor activity, mRNA regulatory element binding
GO:0001709 P cell fate determination
GO:0003723 F RNA binding
GO:0003730 F mRNA 3'-UTR binding
GO:0005635 C nuclear envelope
GO:0005737 C cytoplasm
GO:0006417 P regulation of translation
GO:0007067 P mitotic cell cycle
GO:0007268 P chemical synaptic transmission
GO:0007275 P multicellular organism development
GO:0007280 P pole cell migration
GO:0007281 P germ cell development
GO:0007616 P long-term memory
GO:0008258 P head involution
GO:0008582 P regulation of synaptic assembly at neuromuscular junction
GO:0008595 P anterior/posterior axis specification, embryo
GO:0016441 P posttranscriptional gene silencing
GO:0016477 P cell migration
GO:0017148 P negative regulation of translation
GO:0031594 C neuromuscular junction
GO:0042059 P negative regulation of epidermal growth factor receptor signaling pathway
GO:0042078 P germ-line stem cell division
GO:0045727 P positive regulation of translation
GO:0045786 P negative regulation of cell cycle
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0048149 P behavioral response to ethanol
GO:0048477 P oogenesis
GO:0048813 P dendrite morphogenesis
GO:0050804 P modulation of chemical synaptic transmission
GO:0060213 P positive regulation of nuclear-transcribed mRNA poly(A) tail shortening
GO:0061176 C type Ib terminal bouton
GO:0061177 C type Is terminal bouton
GO:0097482 C muscle cell postsynaptic specialization
4416 O_BomoSK13976_5prime_partial:A_BomoSK_comp13423_c0_seq3
135bp
4417 O_BomoSK13977_3prime_partial:A_BomoSK_comp13423_c0_seq4
416bp
 PREDICTED:_maternal_protein_pumilio-like_[Bombyx_mori]
GO:0000288 P nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay
GO:0000900 F translation repressor activity, mRNA regulatory element binding
GO:0001709 P cell fate determination
GO:0003723 F RNA binding
GO:0003730 F mRNA 3'-UTR binding
GO:0005635 C nuclear envelope
GO:0005737 C cytoplasm
GO:0006417 P regulation of translation
GO:0007067 P mitotic cell cycle
GO:0007268 P chemical synaptic transmission
GO:0007275 P multicellular organism development
GO:0007280 P pole cell migration
GO:0007281 P germ cell development
GO:0007616 P long-term memory
GO:0008258 P head involution
GO:0008582 P regulation of synaptic assembly at neuromuscular junction
GO:0008595 P anterior/posterior axis specification, embryo
GO:0016441 P posttranscriptional gene silencing
GO:0016477 P cell migration
GO:0017148 P negative regulation of translation
GO:0031594 C neuromuscular junction
GO:0042059 P negative regulation of epidermal growth factor receptor signaling pathway
GO:0042078 P germ-line stem cell division
GO:0045727 P positive regulation of translation
GO:0045786 P negative regulation of cell cycle
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0048149 P behavioral response to ethanol
GO:0048477 P oogenesis
GO:0048813 P dendrite morphogenesis
GO:0050804 P modulation of chemical synaptic transmission
GO:0060213 P positive regulation of nuclear-transcribed mRNA poly(A) tail shortening
GO:0061176 C type Ib terminal bouton
GO:0061177 C type Is terminal bouton
GO:0097482 C muscle cell postsynaptic specialization
4418 O_BomoSK13978_complete:A_BomoSK_comp13424_c0_seq1
774bp
 PREDICTED:_AFG3-like_protein_2_[Papilio_xuthus]
GO:0000166 F nucleotide binding
GO:0004176 F ATP-dependent peptidase activity
GO:0004222 F metalloendopeptidase activity
GO:0005524 F ATP binding
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0006461 P protein-containing complex assembly
GO:0006508 P proteolysis
GO:0007005 P mitochondrion organization
GO:0007409 P axonogenesis
GO:0007528 P neuromuscular junction development
GO:0008053 P mitochondrial fusion
GO:0008233 F peptidase activity
GO:0008237 F metallopeptidase activity
GO:0008270 F zinc ion binding
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016787 F hydrolase activity
GO:0021675 P nerve development
GO:0031966 C mitochondrial membrane
GO:0034982 P mitochondrial protein processing
GO:0040014 P regulation of multicellular organism growth
GO:0042407 P cristae formation
GO:0042552 P myelination
GO:0045041 P protein import into mitochondrial intermembrane space
GO:0046872 F metal ion binding
GO:0048747 P muscle cell development
GO:0060013 P righting reflex
4419 O_BomoSK13979_complete:A_BomoSK_comp13424_c0_seq1
115bp
 Uncharacterised_protein_[Bordetella_pertussis]
4420 O_BomoSK1397_5prime_partial:A_BomoSK_comp4170_c0_seq1
170bp
 PPE_family_protein_PPE5_[Mycobacterium_tuberculosis_XTB13-089]
4421 O_BomoSK13980_complete:A_BomoSK_comp13425_c0_seq1
1831bp
 PREDICTED:_transcription_initiation_factor_TFIID_subunit_1_isoform_X1_[Amyelois_transitella]
GO:0000166 F nucleotide binding
GO:0001075 F RNA polymerase II general transcription initiation factor activity
GO:0001129 F obsolete RNA polymerase II transcription factor activity, TBP-class protein binding, involved in preinitiation complex assembly
GO:0003677 F DNA binding
GO:0004402 F histone acetyltransferase activity
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005669 C transcription factor TFIID complex
GO:0005730 C nucleolus
GO:0006351 P transcription, DNA-templated
GO:0006352 P DNA-templated transcription, initiation
GO:0006355 P regulation of transcription, DNA-templated
GO:0006367 P transcription initiation from RNA polymerase II promoter
GO:0006461 P protein-containing complex assembly
GO:0006468 P protein phosphorylation
GO:0007049 P cell cycle
GO:0007221 P positive regulation of transcription of Notch receptor target
GO:0008134 F transcription factor binding
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016573 P histone acetylation
GO:0016740 F transferase activity
GO:0022008 P neurogenesis
GO:0043565 F sequence-specific DNA binding
GO:0044212 F transcription cis-regulatory region binding
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046425 P regulation of receptor signaling pathway via JAK-STAT
GO:0051123 P RNA polymerase II preinitiation complex assembly
GO:0051726 P regulation of cell cycle
GO:0060261 P positive regulation of transcription initiation from RNA polymerase II promoter
4422 O_BomoSK13981_complete:A_BomoSK_comp13425_c0_seq1
195bp
 hypothetical_protein_[Vibrio_parahaemolyticus]
4423 O_BomoSK13982_complete:A_BomoSK_comp13425_c0_seq1
167bp
 integrase,_partial_[uncultured_bacterium]
4424 O_BomoSK13983_complete:A_BomoSK_comp13425_c0_seq1
108bp
 SAM-dependent_methyltransferase_[Aeromonas_lacus]
4425 O_BomoSK13984_complete:A_BomoSK_comp13425_c0_seq1
105bp
 CMGC/MAPK_protein_kinase_[Salpingoeca_rosetta]
4426 O_BomoSK13985_5prime_partial:A_BomoSK_comp13425_c0_seq2
1495bp
 PREDICTED:_transcription_initiation_factor_TFIID_subunit_1_isoform_X1_[Amyelois_transitella]
GO:0000166 F nucleotide binding
GO:0001075 F RNA polymerase II general transcription initiation factor activity
GO:0001129 F obsolete RNA polymerase II transcription factor activity, TBP-class protein binding, involved in preinitiation complex assembly
GO:0003677 F DNA binding
GO:0004402 F histone acetyltransferase activity
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005669 C transcription factor TFIID complex
GO:0005730 C nucleolus
GO:0006351 P transcription, DNA-templated
GO:0006352 P DNA-templated transcription, initiation
GO:0006355 P regulation of transcription, DNA-templated
GO:0006367 P transcription initiation from RNA polymerase II promoter
GO:0006461 P protein-containing complex assembly
GO:0006468 P protein phosphorylation
GO:0007049 P cell cycle
GO:0007221 P positive regulation of transcription of Notch receptor target
GO:0008134 F transcription factor binding
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016573 P histone acetylation
GO:0016740 F transferase activity
GO:0022008 P neurogenesis
GO:0043565 F sequence-specific DNA binding
GO:0044212 F transcription cis-regulatory region binding
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046425 P regulation of receptor signaling pathway via JAK-STAT
GO:0051123 P RNA polymerase II preinitiation complex assembly
GO:0051726 P regulation of cell cycle
GO:0060261 P positive regulation of transcription initiation from RNA polymerase II promoter
4427 O_BomoSK13986_complete:A_BomoSK_comp13425_c0_seq2
195bp
 hypothetical_protein_[Vibrio_parahaemolyticus]
4428 O_BomoSK13987_3prime_partial:A_BomoSK_comp13425_c0_seq2
161bp
 integrase,_partial_[uncultured_bacterium]
4429 O_BomoSK13988_complete:A_BomoSK_comp13425_c0_seq2
108bp
 SAM-dependent_methyltransferase_[Aeromonas_lacus]
4430 O_BomoSK13989_complete:A_BomoSK_comp13425_c0_seq2
105bp
 CMGC/MAPK_protein_kinase_[Salpingoeca_rosetta]
4431 O_BomoSK1398_complete:A_BomoSK_comp4170_c0_seq1
109bp
 hypothetical_protein_[Pseudomonas_sp._Leaf15]
4432 O_BomoSK13990_internal:A_BomoSK_comp13427_c0_seq1
188bp
 PREDICTED:_1-phosphatidylinositol_3-phosphate_5-kinase-like_isoform_X1_[Bombyx_mori]
4433 O_BomoSK13991_5prime_partial:A_BomoSK_comp13427_c0_seq1
150bp
 hypothetical_protein_[Pandoraea_pulmonicola]
4434 O_BomoSK13992_5prime_partial:A_BomoSK_comp13427_c0_seq1
102bp
 hypothetical_protein_ABR76_01880,_partial_[Acidimicrobiia_bacterium_BACL6_MAG-121220-bin61]
4435 O_BomoSK13993_5prime_partial:A_BomoSK_comp13427_c0_seq2
171bp
 PREDICTED:_1-phosphatidylinositol_3-phosphate_5-kinase-like_isoform_X1_[Bombyx_mori]
4436 O_BomoSK13994_5prime_partial:A_BomoSK_comp13428_c0_seq1
357bp
 PREDICTED:_uncharacterized_protein_LOC105841590_isoform_X2_[Bombyx_mori]
4437 O_BomoSK13995_5prime_partial:A_BomoSK_comp13428_c1_seq1
278bp
 PREDICTED:_nudix_hydrolase_8-like_[Amyelois_transitella]
GO:0005829 C cytosol
GO:0008152 P metabolic process
GO:0009611 P response to wounding
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
4438 O_BomoSK13996_complete:A_BomoSK_comp13430_c0_seq1
474bp
 PREDICTED:_ikaros_family_zinc_finger_protein_isoform_X2_[Papilio_xuthus]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007049 P cell cycle
GO:0007275 P multicellular organism development
GO:0007498 P mesoderm development
GO:0016568 P chromatin organization
GO:0030098 P lymphocyte differentiation
GO:0030218 P erythrocyte differentiation
GO:0043234 C protein-containing complex
GO:0044212 F transcription cis-regulatory region binding
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046872 F metal ion binding
4439 O_BomoSK13997_complete:A_BomoSK_comp13430_c0_seq1
163bp
 isocitrate_lyase_[Lysobacter_arseniciresistens]
4440 O_BomoSK13998_complete:A_BomoSK_comp13430_c0_seq1
117bp
 MBL_fold_hydrolase_[Kribbella_flavida]
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