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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
4081 O_BomoSK13674_3prime_partial:A_BomoSK_comp13323_c0_seq8
212bp
 PREDICTED:_MOB_kinase_activator-like_2_isoform_X4_[Amyelois_transitella]
GO:0000902 P cell morphogenesis
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0046872 F metal ion binding
4082 O_BomoSK13675_5prime_partial:A_BomoSK_comp13323_c0_seq8
151bp
4083 O_BomoSK13676_complete:A_BomoSK_comp13324_c0_seq2
183bp
 hypothetical_protein_KGM_21559_[Danaus_plexippus]
GO:0006810 P transport
GO:0015403 F thiamine transmembrane transporter activity
GO:0015888 P thiamine transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0071934 P thiamine transmembrane transport
4084 O_BomoSK13677_complete:A_BomoSK_comp13325_c0_seq1
507bp
 PREDICTED:_beta-1,4-glucuronyltransferase_1_[Papilio_machaon]
GO:0000139 C Golgi membrane
GO:0005794 C Golgi apparatus
GO:0006486 P protein glycosylation
GO:0008532 F N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase activity
GO:0015020 F glucuronosyltransferase activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016740 F transferase activity
GO:0016757 F glycosyltransferase activity
GO:0030311 P poly-N-acetyllactosamine biosynthetic process
GO:0035269 P protein O-linked mannosylation
GO:0046872 F metal ion binding
GO:0048747 P muscle cell development
4085 O_BomoSK13678_complete:A_BomoSK_comp13325_c0_seq1
146bp
4086 O_BomoSK13679_complete:A_BomoSK_comp13325_c0_seq1
105bp
 2-hydroxy-acid_oxidase_[Geobacillus_subterraneus]
4087 O_BomoSK1367_complete:A_BomoSK_comp4139_c0_seq1
218bp
 (6-4)_photolyase_[Danaus_plexippus]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000166 F nucleotide binding
GO:0001047 F core promoter sequence-specific DNA binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006094 P gluconeogenesis
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006975 P DNA damage induced protein phosphorylation
GO:0007165 P signal transduction
GO:0009881 F photoreceptor activity
GO:0018298 P protein-chromophore linkage
GO:0031397 P negative regulation of protein ubiquitination
GO:0032922 P circadian regulation of gene expression
GO:0033762 P response to glucagon
GO:0042593 P glucose homeostasis
GO:0042752 P regulation of circadian rhythm
GO:0042754 P negative regulation of circadian rhythm
GO:0043130 F ubiquitin binding
GO:0043153 P entrainment of circadian clock by photoperiod
GO:0045744 P negative regulation of G protein-coupled receptor signaling pathway
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0048511 P rhythmic process
GO:0050896 P response to stimulus
GO:2000001 P regulation of DNA damage checkpoint
GO:2000323 P negative regulation of glucocorticoid receptor signaling pathway
4088 O_BomoSK13680_5prime_partial:A_BomoSK_comp13327_c0_seq1
360bp
 hypothetical_protein_RR46_03803_[Papilio_xuthus]
4089 O_BomoSK13681_complete:A_BomoSK_comp13327_c0_seq1
155bp
 ferrichrome_ABC_transporter_permease_[Cohnella_thermotolerans]
4090 O_BomoSK13682_5prime_partial:A_BomoSK_comp13328_c1_seq1
191bp
 PREDICTED:_Na(+)/H(+)_exchange_regulatory_cofactor_NHE-RF2_isoform_X1_[Amyelois_transitella]
GO:0001726 C ruffle
GO:0003096 P renal sodium ion transport
GO:0005102 F signaling receptor binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0005886 C plasma membrane
GO:0005902 C microvillus
GO:0006461 P protein-containing complex assembly
GO:0007191 P adenylate cyclase-activating dopamine receptor signaling pathway
GO:0007605 P sensory perception of sound
GO:0008013 F beta-catenin binding
GO:0008285 P negative regulation of cell population proliferation
GO:0008360 P regulation of cell shape
GO:0008361 P regulation of cell size
GO:0010642 P negative regulation of platelet-derived growth factor receptor signaling pathway
GO:0010766 P negative regulation of sodium ion transport
GO:0012505 C endomembrane system
GO:0014067 P negative regulation of phosphatidylinositol 3-kinase signaling
GO:0015629 C actin cytoskeleton
GO:0016020 C membrane
GO:0016055 P Wnt signaling pathway
GO:0016324 C apical plasma membrane
GO:0017081 F chloride channel regulator activity
GO:0019902 F phosphatase binding
GO:0019904 F protein domain specific binding
GO:0019933 P cAMP-mediated signaling
GO:0022612 P gland morphogenesis
GO:0030033 P microvillus assembly
GO:0030036 P actin cytoskeleton organization
GO:0030165 F PDZ domain binding
GO:0030175 C filopodium
GO:0030336 P negative regulation of cell migration
GO:0030643 P cellular phosphate ion homeostasis
GO:0031526 C brush border membrane
GO:0031528 C microvillus membrane
GO:0031698 F beta-2 adrenergic receptor binding
GO:0031982 C vesicle
GO:0032403 F protein-containing complex binding
GO:0032415 P regulation of sodium:proton antiporter activity
GO:0032416 P negative regulation of sodium:proton antiporter activity
GO:0032420 C stereocilium
GO:0032426 C stereocilium tip
GO:0032782 P bile acid secretion
GO:0032947 F molecular adaptor activity
GO:0034613 P cellular protein localization
GO:0034635 P glutathione transport
GO:0035414 P negative regulation of canonical Wnt signaling pathway
GO:0040023 P nuclear migration
GO:0042995 C cell projection
GO:0043231 C intracellular membrane-bounded organelle
GO:0043621 F protein self-association
GO:0044062 P regulation of excretion
GO:0045121 C membrane raft
GO:0045177 C apical part of cell
GO:0045198 P establishment of epithelial cell apical/basal polarity
GO:0045859 P regulation of protein kinase activity
GO:0045930 P negative regulation of mitotic cell cycle
GO:0048471 C perinuclear region of cytoplasm
GO:0050780 F dopamine receptor binding
GO:0051683 P establishment of Golgi localization
GO:0051898 P negative regulation of protein kinase B signaling
GO:0060088 P auditory receptor cell stereocilium organization
GO:0060158 P phospholipase C-activating dopamine receptor signaling pathway
GO:0070062 C extracellular exosome
GO:0070293 P renal absorption
GO:0070373 P negative regulation of ERK1 and ERK2 cascade
GO:0070851 F growth factor receptor binding
GO:0071944 C cell periphery
GO:0090002 P protein localization to plasma membrane
GO:0097225 C sperm midpiece
GO:0097291 P renal phosphate ion absorption
GO:2000146 P negative regulation of cell motility
GO:2001244 P positive regulation of intrinsic apoptotic signaling pathway
4091 O_BomoSK13683_complete:A_BomoSK_comp13328_c1_seq1
127bp
4092 O_BomoSK13684_complete:A_BomoSK_comp13329_c0_seq1
309bp
 PREDICTED:_mitochondrial_folate_transporter/carrier_[Amyelois_transitella]
GO:0003735 F structural constituent of ribosome
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0006412 P translation
GO:0006544 P glycine metabolic process
GO:0006810 P transport
GO:0006839 P mitochondrial transport
GO:0008517 F folic acid transmembrane transporter activity
GO:0015884 P folic acid transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0031966 C mitochondrial membrane
GO:0046655 P folic acid metabolic process
GO:1904947 P folate import into mitochondrion
4093 O_BomoSK13685_complete:A_BomoSK_comp13329_c0_seq2
320bp
 PREDICTED:_mitochondrial_folate_transporter/carrier_[Amyelois_transitella]
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0006810 P transport
GO:0006839 P mitochondrial transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0031966 C mitochondrial membrane
4094 O_BomoSK13686_5prime_partial:A_BomoSK_comp13329_c0_seq2
114bp
 predicted_protein_[Phaeodactylum_tricornutum_CCAP_1055/1]
4095 O_BomoSK13687_complete:A_BomoSK_comp13330_c0_seq1
166bp
 PREDICTED:_uncharacterized_protein_LOC106131999_isoform_X6_[Amyelois_transitella]
4096 O_BomoSK13688_complete:A_BomoSK_comp13330_c0_seq1
157bp
 unnamed_protein_product_[Oncorhynchus_mykiss]
GO:0003677 F DNA binding
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0005634 C nucleus
GO:0006310 P DNA recombination
GO:0006313 P transposition, DNA-mediated
GO:0015074 P DNA integration
GO:0016787 F hydrolase activity
GO:0032502 P developmental process
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
4097 O_BomoSK13689_complete:A_BomoSK_comp13330_c0_seq1
139bp
 glucose-1-phosphate_thymidylyltransferase_[Elizabethkingia_anophelis]
4098 O_BomoSK1368_complete:A_BomoSK_comp4139_c0_seq2
442bp
 (6-4)_photolyase_[Operophtera_brumata]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000166 F nucleotide binding
GO:0000989 F obsolete transcription factor activity, transcription factor binding
GO:0001046 F core promoter sequence-specific DNA binding
GO:0001047 F core promoter sequence-specific DNA binding
GO:0003690 F double-stranded DNA binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0006094 P gluconeogenesis
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006975 P DNA damage induced protein phosphorylation
GO:0007165 P signal transduction
GO:0007623 P circadian rhythm
GO:0008134 F transcription factor binding
GO:0009881 F photoreceptor activity
GO:0018298 P protein-chromophore linkage
GO:0019900 F kinase binding
GO:0019901 F protein kinase binding
GO:0019902 F phosphatase binding
GO:0019915 P lipid storage
GO:0031397 P negative regulation of protein ubiquitination
GO:0032868 P response to insulin
GO:0032922 P circadian regulation of gene expression
GO:0033762 P response to glucagon
GO:0035257 F nuclear receptor binding
GO:0042593 P glucose homeostasis
GO:0042752 P regulation of circadian rhythm
GO:0042754 P negative regulation of circadian rhythm
GO:0042826 F histone deacetylase binding
GO:0043130 F ubiquitin binding
GO:0043153 P entrainment of circadian clock by photoperiod
GO:0045744 P negative regulation of G protein-coupled receptor signaling pathway
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0048511 P rhythmic process
GO:0050896 P response to stimulus
GO:2000001 P regulation of DNA damage checkpoint
GO:2000323 P negative regulation of glucocorticoid receptor signaling pathway
GO:2000850 P negative regulation of glucocorticoid secretion
4099 O_BomoSK13690_3prime_partial:A_BomoSK_comp13332_c0_seq1
1126bp
 PREDICTED:_pre-rRNA-processing_protein_TSR1_homolog_[Amyelois_transitella]
GO:0000166 F nucleotide binding
GO:0005524 F ATP binding
GO:0005525 F GTP binding
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005819 C spindle
GO:0005856 C cytoskeleton
GO:0006364 P rRNA processing
GO:0042254 P ribosome biogenesis
GO:0042255 P ribosome assembly
GO:0072686 C mitotic spindle
4100 O_BomoSK13691_complete:A_BomoSK_comp13332_c0_seq1
132bp
4101 O_BomoSK13692_complete:A_BomoSK_comp13332_c0_seq1
106bp
 hypothetical_protein_[Methanosarcina_barkeri]
4102 O_BomoSK13693_3prime_partial:A_BomoSK_comp13333_c0_seq1
355bp
 PREDICTED:_protein_MON2_homolog_isoform_X1_[Papilio_polytes]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0006810 P transport
GO:0008150 P biological_process
GO:0015031 P protein transport
4103 O_BomoSK13694_5prime_partial:A_BomoSK_comp13333_c0_seq1
130bp
 exonuclease_subunit_SbcD_[Acidovorax_sp._12322-1]
4104 O_BomoSK13695_internal:A_BomoSK_comp13333_c1_seq1
257bp
 putative_MON2-like_protein_[Danaus_plexippus]
GO:0006810 P transport
GO:0015031 P protein transport
4105 O_BomoSK13696_5prime_partial:A_BomoSK_comp13333_c1_seq1
152bp
 hypothetical_protein_[Nocardia_higoensis]
4106 O_BomoSK13697_internal:A_BomoSK_comp13334_c0_seq1
1970bp
 PREDICTED:_uncharacterized_protein_LOC101745326_isoform_X2_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0003682 F chromatin binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005694 C chromosome
GO:0005730 C nucleolus
GO:0010369 C chromocenter
4107 O_BomoSK13698_5prime_partial:A_BomoSK_comp13334_c0_seq1
136bp
 hypothetical_protein_[Bacillus_marisflavi]
4108 O_BomoSK13699_complete:A_BomoSK_comp13334_c0_seq1
112bp
4109 O_BomoSK1369_5prime_partial:A_BomoSK_comp4140_c0_seq1
217bp
 PREDICTED:_furin-like_convetase_isoform_X1_[Bombyx_mori]
GO:0001822 P kidney development
GO:0002001 P renin secretion into blood stream
GO:0003279 P cardiac septum development
GO:0004175 F endopeptidase activity
GO:0004252 F serine-type endopeptidase activity
GO:0005515 F protein binding
GO:0005576 C extracellular region
GO:0005615 C extracellular space
GO:0005794 C Golgi apparatus
GO:0005796 C Golgi lumen
GO:0006465 P signal peptide processing
GO:0006508 P proteolysis
GO:0007267 P cell-cell signaling
GO:0007368 P determination of left/right symmetry
GO:0007507 P heart development
GO:0007565 P female pregnancy
GO:0007566 P embryo implantation
GO:0008233 F peptidase activity
GO:0008236 F serine-type peptidase activity
GO:0009952 P anterior/posterior pattern specification
GO:0012505 C endomembrane system
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016485 P protein processing
GO:0016486 P peptide hormone processing
GO:0016787 F hydrolase activity
GO:0019058 P viral life cycle
GO:0030141 C secretory granule
GO:0030323 P respiratory tube development
GO:0032455 P nerve growth factor processing
GO:0035108 P limb morphogenesis
GO:0042089 P cytokine production
GO:0042277 F peptide binding
GO:0043043 P peptide biosynthetic process
GO:0048566 P embryonic digestive tract development
GO:0048706 P embryonic skeletal system development
GO:0060976 P coronary vasculature development
4110 O_BomoSK136_3prime_partial:A_BomoSK_comp426_c0_seq1
168bp
 PREDICTED:_uncharacterized_protein_LOC105388706_[Plutella_xylostella]
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