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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
3961 O_BomoSK13566_5prime_partial:A_BomoSK_comp13311_c0_seq1
357bp
3962 O_BomoSK13567_5prime_partial:A_BomoSK_comp13311_c0_seq1
192bp
 hypothetical_protein_VOLCADRAFT_92643_[Volvox_carteri_f._nagariensis]
3963 O_BomoSK13568_complete:A_BomoSK_comp13311_c0_seq1
154bp
3964 O_BomoSK13569_5prime_partial:A_BomoSK_comp13311_c0_seq1
140bp
3965 O_BomoSK1356_5prime_partial:A_BomoSK_comp4130_c0_seq1
287bp
 putative_apoptosis_antagonizing_transcription_factor_[Operophtera_brumata]
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0006357 P regulation of transcription by RNA polymerase II
3966 O_BomoSK13570_3prime_partial:A_BomoSK_comp13311_c0_seq2
958bp
 PREDICTED:_LOW_QUALITY_PROTEIN:_rho_guanine_nucleotide_exchange_factor_11_[Bombyx_mori]
GO:0001664 F G protein-coupled receptor binding
GO:0005085 F guanyl-nucleotide exchange factor activity
GO:0005089 F guanyl-nucleotide exchange factor activity
GO:0005096 F GTPase activator activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0007186 P G protein-coupled receptor signaling pathway
GO:0016020 C membrane
GO:0035023 P regulation of Rho protein signal transduction
GO:0035556 P intracellular signal transduction
GO:0043547 P positive regulation of GTPase activity
GO:0070062 C extracellular exosome
3967 O_BomoSK13571_5prime_partial:A_BomoSK_comp13311_c0_seq2
357bp
3968 O_BomoSK13572_complete:A_BomoSK_comp13311_c0_seq2
205bp
 alpha-2-macroglobulin_[Phenylobacterium_sp._Root700]
3969 O_BomoSK13573_5prime_partial:A_BomoSK_comp13311_c0_seq2
192bp
 hypothetical_protein_VOLCADRAFT_92643_[Volvox_carteri_f._nagariensis]
3970 O_BomoSK13574_3prime_partial:A_BomoSK_comp13311_c0_seq3
958bp
 PREDICTED:_LOW_QUALITY_PROTEIN:_rho_guanine_nucleotide_exchange_factor_11_[Bombyx_mori]
GO:0001664 F G protein-coupled receptor binding
GO:0005085 F guanyl-nucleotide exchange factor activity
GO:0005089 F guanyl-nucleotide exchange factor activity
GO:0005096 F GTPase activator activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0007186 P G protein-coupled receptor signaling pathway
GO:0016020 C membrane
GO:0035023 P regulation of Rho protein signal transduction
GO:0035556 P intracellular signal transduction
GO:0043547 P positive regulation of GTPase activity
GO:0070062 C extracellular exosome
3971 O_BomoSK13575_5prime_partial:A_BomoSK_comp13311_c0_seq3
357bp
3972 O_BomoSK13576_complete:A_BomoSK_comp13311_c0_seq3
205bp
 alpha-2-macroglobulin_[Phenylobacterium_sp._Root700]
3973 O_BomoSK13577_5prime_partial:A_BomoSK_comp13311_c0_seq3
192bp
 hypothetical_protein_VOLCADRAFT_92643_[Volvox_carteri_f._nagariensis]
3974 O_BomoSK13578_3prime_partial:A_BomoSK_comp13311_c0_seq4
628bp
 PREDICTED:_LOW_QUALITY_PROTEIN:_rho_guanine_nucleotide_exchange_factor_11_[Bombyx_mori]
GO:0001664 F G protein-coupled receptor binding
GO:0005085 F guanyl-nucleotide exchange factor activity
GO:0005089 F guanyl-nucleotide exchange factor activity
GO:0005096 F GTPase activator activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0007186 P G protein-coupled receptor signaling pathway
GO:0016020 C membrane
GO:0035023 P regulation of Rho protein signal transduction
GO:0035556 P intracellular signal transduction
GO:0043547 P positive regulation of GTPase activity
GO:0070062 C extracellular exosome
3975 O_BomoSK13579_5prime_partial:A_BomoSK_comp13311_c0_seq4
357bp
3976 O_BomoSK1357_3prime_partial:A_BomoSK_comp4130_c0_seq3
276bp
 PREDICTED:_protein_AATF_[Amyelois_transitella]
GO:0003700 F DNA-binding transcription factor activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0005813 C centrosome
GO:0005829 C cytosol
GO:0005925 C focal adhesion
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0006974 P cellular response to DNA damage stimulus
GO:0007155 P cell adhesion
GO:0007346 P regulation of mitotic cell cycle
GO:0019904 F protein domain specific binding
GO:0032929 P negative regulation of superoxide anion generation
GO:0040016 P embryonic cleavage
GO:0042254 P ribosome biogenesis
GO:0042985 P negative regulation of amyloid precursor protein biosynthetic process
GO:0043065 P positive regulation of apoptotic process
GO:0043066 P negative regulation of apoptotic process
GO:0043522 F leucine zipper domain binding
GO:0044822 F RNA binding
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0048156 F tau protein binding
GO:2000378 P negative regulation of reactive oxygen species metabolic process
3977 O_BomoSK13580_complete:A_BomoSK_comp13311_c0_seq4
204bp
 MULTISPECIES:_hypothetical_protein_[Streptomyces]
3978 O_BomoSK13581_5prime_partial:A_BomoSK_comp13311_c0_seq4
192bp
 hypothetical_protein_VOLCADRAFT_92643_[Volvox_carteri_f._nagariensis]
3979 O_BomoSK13582_3prime_partial:A_BomoSK_comp13311_c0_seq5
628bp
 PREDICTED:_LOW_QUALITY_PROTEIN:_rho_guanine_nucleotide_exchange_factor_11_[Bombyx_mori]
GO:0001664 F G protein-coupled receptor binding
GO:0005085 F guanyl-nucleotide exchange factor activity
GO:0005089 F guanyl-nucleotide exchange factor activity
GO:0005096 F GTPase activator activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0007186 P G protein-coupled receptor signaling pathway
GO:0016020 C membrane
GO:0035023 P regulation of Rho protein signal transduction
GO:0035556 P intracellular signal transduction
GO:0043547 P positive regulation of GTPase activity
GO:0070062 C extracellular exosome
3980 O_BomoSK13583_5prime_partial:A_BomoSK_comp13311_c0_seq5
357bp
3981 O_BomoSK13584_complete:A_BomoSK_comp13311_c0_seq5
204bp
 MULTISPECIES:_hypothetical_protein_[Streptomyces]
3982 O_BomoSK13585_5prime_partial:A_BomoSK_comp13311_c0_seq5
192bp
 hypothetical_protein_VOLCADRAFT_92643_[Volvox_carteri_f._nagariensis]
3983 O_BomoSK13586_complete:A_BomoSK_comp13313_c0_seq1
498bp
 PREDICTED:_solute_carrier_family_12_member_8_[Papilio_xuthus]
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006813 P potassium ion transport
GO:0015293 F symporter activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0055085 P transmembrane transport
3984 O_BomoSK13587_complete:A_BomoSK_comp13313_c0_seq1
163bp
 ABC_transporter_permease_[Pseudorhodobacter_antarcticus]
3985 O_BomoSK13588_complete:A_BomoSK_comp13313_c0_seq2
445bp
 putative_Na-K-Cl_cotransporter_[Danaus_plexippus]
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006813 P potassium ion transport
GO:0015293 F symporter activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0055085 P transmembrane transport
3986 O_BomoSK13589_complete:A_BomoSK_comp13313_c0_seq2
163bp
 ABC_transporter_permease_[Pseudorhodobacter_antarcticus]
3987 O_BomoSK1358_complete:A_BomoSK_comp4132_c0_seq1
305bp
 PREDICTED:_uncharacterized_protein_C9orf78_[Amyelois_transitella]
GO:0005515 F protein binding
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
3988 O_BomoSK13590_complete:A_BomoSK_comp13313_c0_seq3
590bp
 putative_Na-K-Cl_cotransporter_[Danaus_plexippus]
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006813 P potassium ion transport
GO:0015293 F symporter activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0055085 P transmembrane transport
3989 O_BomoSK13591_complete:A_BomoSK_comp13313_c0_seq3
163bp
 ABC_transporter_permease_[Pseudorhodobacter_antarcticus]
3990 O_BomoSK13592_complete:A_BomoSK_comp13313_c0_seq3
102bp
 putative_Na-K-Cl_cotransporter,_partial_[Operophtera_brumata]
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