Search ORF from Assembled RNA-Seq

No.	Name Length	Chromosome No./Scaffold Id Scaffold Length	BLAST (vs nr)	Gene ontology
3841	O_BomoSK13458_5prime_partial:A_BomoSK_comp13288_c1_seq2 330bp	Bomo_Chr12	PREDICTED:_pre-mRNA-processing_factor_40_homolog_A_isoform_X2_[Bombyx_mori]	GO:0000398 P mRNA splicing, via spliceosome GO:0003723 F RNA binding GO:0005634 C nucleus GO:0005685 C U1 snRNP GO:0006397 P mRNA processing GO:0008380 P RNA splicing GO:0016607 C nuclear speck GO:0071004 C U2-type prespliceosome
3842	O_BomoSK13459_5prime_partial:A_BomoSK_comp13290_c0_seq2 449bp	Bomo_Chr6	PREDICTED:_tigger_transposable_element-derived_protein_4-like_[Papilio_machaon]	GO:0003676 F nucleic acid binding GO:0003677 F DNA binding GO:0005634 C nucleus
3843	O_BomoSK1345_5prime_partial:A_BomoSK_comp4117_c0_seq1 265bp	Bomo_Chr12	LysR_family_transcriptional_regulator_[Corynebacterium_casei]
3844	O_BomoSK13460_5prime_partial:A_BomoSK_comp13291_c1_seq1 184bp	Bomo_Scaf001	PREDICTED:_A-kinase_anchor_protein_17A_[Papilio_machaon]
3845	O_BomoSK13461_5prime_partial:A_BomoSK_comp13292_c2_seq1 124bp	Bomo_Chr24	PREDICTED:_uncharacterized_protein_LOC106142138_[Amyelois_transitella]
3846	O_BomoSK13462_5prime_partial:A_BomoSK_comp13292_c2_seq1 118bp	Bomo_Chr24
3847	O_BomoSK13463_complete:A_BomoSK_comp13293_c0_seq1 313bp	Bomo_Chr18	PREDICTED:_uncharacterized_protein_LOC101745185,_partial_[Bombyx_mori]	GO:0001954 P positive regulation of cell-matrix adhesion GO:0007155 P cell adhesion GO:0016020 C membrane GO:0016021 C integral component of membrane GO:0042246 P tissue regeneration GO:1990384 P hyaloid vascular plexus regression
3848	O_BomoSK13464_complete:A_BomoSK_comp13293_c0_seq2 297bp	Bomo_Chr18	PREDICTED:_uncharacterized_protein_LOC101745185,_partial_[Bombyx_mori]	GO:0001954 P positive regulation of cell-matrix adhesion GO:0007155 P cell adhesion GO:0016020 C membrane GO:0016021 C integral component of membrane GO:0042246 P tissue regeneration GO:1990384 P hyaloid vascular plexus regression
3849	O_BomoSK13465_complete:A_BomoSK_comp13293_c0_seq3 275bp	Bomo_Chr18	PREDICTED:_uncharacterized_protein_LOC101745185,_partial_[Bombyx_mori]	GO:0001954 P positive regulation of cell-matrix adhesion GO:0007155 P cell adhesion GO:0016020 C membrane GO:0016021 C integral component of membrane GO:0042246 P tissue regeneration GO:1990384 P hyaloid vascular plexus regression
3850	O_BomoSK13466_complete:A_BomoSK_comp13294_c0_seq1 173bp	Bomo_Chr18	PREDICTED:_uncharacterized_protein_LOC106137938_[Amyelois_transitella]
3851	O_BomoSK13467_complete:A_BomoSK_comp13294_c0_seq1 113bp	Bomo_Chr18
3852	O_BomoSK13468_complete:A_BomoSK_comp13295_c0_seq1 142bp	Bomo_Chr1	PREDICTED:_uncharacterized_protein_LOC101736230_[Bombyx_mori]
3853	O_BomoSK13469_complete:A_BomoSK_comp13295_c0_seq2 316bp	Bomo_Chr1	PREDICTED:_uncharacterized_protein_LOC101736230_[Bombyx_mori]
3854	O_BomoSK1346_complete:A_BomoSK_comp4117_c0_seq1 107bp	Bomo_Chr12	pseudouridine_synthase_[Polynucleobacter_necessarius_subsp._necessarius_STIR1]
3855	O_BomoSK13470_complete:A_BomoSK_comp13296_c0_seq1 626bp	Bomo_Chr12	PREDICTED:_multidrug_resistance-associated_protein_1_isoform_X1_[Bombyx_mori]	GO:0000166 F nucleotide binding GO:0005215 F transporter activity GO:0005524 F ATP binding GO:0005886 C plasma membrane GO:0006810 P transport GO:0008152 P metabolic process GO:0016020 C membrane GO:0016021 C integral component of membrane GO:0016787 F hydrolase activity GO:0016887 F ATP hydrolysis activity GO:0042626 F ATPase-coupled transmembrane transporter activity GO:0055085 P transmembrane transport
3856	O_BomoSK13471_complete:A_BomoSK_comp13296_c0_seq1 118bp	Bomo_Chr12	TRP3_PSEAM_RecName:_Full=Trypsinogen-like_protein_3;_Flags:_Precursor
3857	O_BomoSK13472_complete:A_BomoSK_comp13296_c0_seq1 102bp	Bomo_Chr12	multidrug_ABC_transporter_ATP-binding_protein_[Rhizobium_sp._CF080]
3858	O_BomoSK13473_complete:A_BomoSK_comp13296_c0_seq2 102bp	Bomo_Chr12	HBR300Wp_[Eremothecium_sinecaudum]
3859	O_BomoSK13474_complete:A_BomoSK_comp13296_c0_seq3 620bp	Bomo_Chr12	PREDICTED:_multidrug_resistance-associated_protein_1_isoform_X1_[Bombyx_mori]	GO:0000166 F nucleotide binding GO:0005215 F transporter activity GO:0005524 F ATP binding GO:0005886 C plasma membrane GO:0006810 P transport GO:0008152 P metabolic process GO:0016020 C membrane GO:0016021 C integral component of membrane GO:0016787 F hydrolase activity GO:0016887 F ATP hydrolysis activity GO:0042626 F ATPase-coupled transmembrane transporter activity GO:0055085 P transmembrane transport
3860	O_BomoSK13475_complete:A_BomoSK_comp13296_c0_seq3 118bp	Bomo_Chr12	TRP3_PSEAM_RecName:_Full=Trypsinogen-like_protein_3;_Flags:_Precursor
3861	O_BomoSK13476_3prime_partial:A_BomoSK_comp13296_c0_seq4 622bp	Bomo_Chr12	PREDICTED:_multidrug_resistance-associated_protein_1_isoform_X2_[Bombyx_mori]	GO:0000166 F nucleotide binding GO:0005215 F transporter activity GO:0005524 F ATP binding GO:0005886 C plasma membrane GO:0006810 P transport GO:0008152 P metabolic process GO:0016020 C membrane GO:0016021 C integral component of membrane GO:0016787 F hydrolase activity GO:0016887 F ATP hydrolysis activity GO:0042626 F ATPase-coupled transmembrane transporter activity GO:0055085 P transmembrane transport
3862	O_BomoSK13477_complete:A_BomoSK_comp13296_c0_seq4 118bp	Bomo_Chr12	TRP3_PSEAM_RecName:_Full=Trypsinogen-like_protein_3;_Flags:_Precursor
3863	O_BomoSK13478_complete:A_BomoSK_comp13296_c0_seq4 101bp	Bomo_Chr12	FAD-linked_oxidase_[Thioalkalivibrio_sp._ALJ15]
3864	O_BomoSK13479_3prime_partial:A_BomoSK_comp13296_c0_seq6 498bp	Bomo_Chr12	PREDICTED:_multidrug_resistance-associated_protein_1_isoform_X1_[Bombyx_mori]	GO:0000166 F nucleotide binding GO:0005215 F transporter activity GO:0005524 F ATP binding GO:0005886 C plasma membrane GO:0006810 P transport GO:0008152 P metabolic process GO:0016020 C membrane GO:0016021 C integral component of membrane GO:0016787 F hydrolase activity GO:0016887 F ATP hydrolysis activity GO:0042626 F ATPase-coupled transmembrane transporter activity GO:0055085 P transmembrane transport
3865	O_BomoSK1347_5prime_partial:A_BomoSK_comp4118_c0_seq1 334bp	Bomo_Chr15	PREDICTED:_uncharacterized_protein_LOC106136970_isoform_X1_[Amyelois_transitella]	GO:0000122 P negative regulation of transcription by RNA polymerase II GO:0000977 F RNA polymerase II transcription regulatory region sequence-specific DNA binding GO:0001106 F transcription corepressor activity GO:0003682 F chromatin binding GO:0003712 F transcription coregulator activity GO:0005515 F protein binding GO:0005634 C nucleus GO:0005737 C cytoplasm GO:0006355 P regulation of transcription, DNA-templated GO:0008270 F zinc ion binding GO:0042393 F histone binding GO:0043197 C dendritic spine GO:0043198 C dendritic shaft GO:0046872 F metal ion binding GO:0047485 F protein N-terminus binding GO:0051491 P positive regulation of filopodium assembly GO:0060999 P positive regulation of dendritic spine development GO:0070491 F DNA-binding transcription factor binding GO:0098815 P modulation of excitatory postsynaptic potential GO:1902897 P regulation of postsynaptic density protein 95 clustering GO:1902952 P positive regulation of dendritic spine maintenance
3866	O_BomoSK13480_complete:A_BomoSK_comp13296_c0_seq6 102bp	Bomo_Chr12	6-pyruvoyl-tetrahydropterin_synthase_[Mesorhizobium_plurifarium]
3867	O_BomoSK13481_complete:A_BomoSK_comp13296_c0_seq6 102bp	Bomo_Chr12	HBR300Wp_[Eremothecium_sinecaudum]
3868	O_BomoSK13482_complete:A_BomoSK_comp13296_c0_seq7 621bp	Bomo_Chr12	PREDICTED:_multidrug_resistance-associated_protein_1_isoform_X2_[Bombyx_mori]	GO:0000166 F nucleotide binding GO:0005215 F transporter activity GO:0005524 F ATP binding GO:0005886 C plasma membrane GO:0006810 P transport GO:0008152 P metabolic process GO:0016020 C membrane GO:0016021 C integral component of membrane GO:0016787 F hydrolase activity GO:0016887 F ATP hydrolysis activity GO:0042626 F ATPase-coupled transmembrane transporter activity GO:0055085 P transmembrane transport
3869	O_BomoSK13483_3prime_partial:A_BomoSK_comp13296_c0_seq7 434bp	Bomo_Chr12	PREDICTED:_multidrug_resistance-associated_protein_1_isoform_X1_[Bombyx_mori]	GO:0000166 F nucleotide binding GO:0005215 F transporter activity GO:0005524 F ATP binding GO:0005886 C plasma membrane GO:0006810 P transport GO:0008152 P metabolic process GO:0016020 C membrane GO:0016021 C integral component of membrane GO:0016787 F hydrolase activity GO:0016887 F ATP hydrolysis activity GO:0042626 F ATPase-coupled transmembrane transporter activity GO:0055085 P transmembrane transport
3870	O_BomoSK13484_complete:A_BomoSK_comp13296_c0_seq7 118bp	Bomo_Chr12	TRP3_PSEAM_RecName:_Full=Trypsinogen-like_protein_3;_Flags:_Precursor