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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
2731 O_BomoSK12459_complete:A_BomoSK_comp12968_c0_seq2
162bp
2732 O_BomoSK1245_complete:A_BomoSK_comp4027_c0_seq2
381bp
 PREDICTED:_autophagy-related_protein_16-1-like_[Bombyx_mori]
GO:0000045 P autophagosome assembly
GO:0000421 C autophagosome membrane
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005776 C autophagosome
GO:0005829 C cytosol
GO:0005930 C axoneme
GO:0006810 P transport
GO:0006914 P autophagy
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016236 P macroautophagy
GO:0034045 C phagophore assembly site membrane
GO:0039689 P negative stranded viral RNA replication
GO:0042802 F identical protein binding
2733 O_BomoSK12460_complete:A_BomoSK_comp12968_c0_seq2
141bp
2734 O_BomoSK12461_complete:A_BomoSK_comp12969_c0_seq4
195bp
 PREDICTED:_potassium/sodium_hyperpolarization-activated_cyclic_nucleotide-gated_channel_2_isoform_X5_[Plutella_xylostella]
GO:0000166 F nucleotide binding
GO:0002027 P regulation of heart rate
GO:0003254 P regulation of membrane depolarization
GO:0005216 F ion channel activity
GO:0005222 F intracellular cAMP-activated cation channel activity
GO:0005244 F voltage-gated ion channel activity
GO:0005248 F voltage-gated sodium channel activity
GO:0005249 F voltage-gated potassium channel activity
GO:0005267 F potassium channel activity
GO:0005272 F sodium channel activity
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006812 P cation transport
GO:0006813 P potassium ion transport
GO:0006814 P sodium ion transport
GO:0006936 P muscle contraction
GO:0008015 P blood circulation
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030552 F cAMP binding
GO:0031226 C intrinsic component of plasma membrane
GO:0034765 P regulation of ion transmembrane transport
GO:0035725 P sodium ion transmembrane transport
GO:0042391 P regulation of membrane potential
GO:0042802 F identical protein binding
GO:0048471 C perinuclear region of cytoplasm
GO:0055085 P transmembrane transport
GO:0055117 P regulation of cardiac muscle contraction
GO:0060078 P regulation of postsynaptic membrane potential
GO:0071320 P cellular response to cAMP
GO:0071321 P cellular response to cGMP
GO:0071805 P potassium ion transmembrane transport
GO:0086015 P SA node cell action potential
GO:0086091 P regulation of heart rate by cardiac conduction
2735 O_BomoSK12462_complete:A_BomoSK_comp12969_c0_seq4
103bp
 hypothetical_protein_SBOR_9183_[Sclerotinia_borealis_F-4157]
2736 O_BomoSK12463_complete:A_BomoSK_comp12969_c0_seq5
427bp
 PREDICTED:_potassium/sodium_hyperpolarization-activated_cyclic_nucleotide-gated_channel_2_isoform_X4_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0005216 F ion channel activity
GO:0005222 F intracellular cAMP-activated cation channel activity
GO:0005244 F voltage-gated ion channel activity
GO:0005248 F voltage-gated sodium channel activity
GO:0005249 F voltage-gated potassium channel activity
GO:0005267 F potassium channel activity
GO:0005272 F sodium channel activity
GO:0005515 F protein binding
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006813 P potassium ion transport
GO:0006814 P sodium ion transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030424 C axon
GO:0030425 C dendrite
GO:0030552 F cAMP binding
GO:0034765 P regulation of ion transmembrane transport
GO:0035725 P sodium ion transmembrane transport
GO:0042391 P regulation of membrane potential
GO:0043025 C neuronal cell body
GO:0044316 C cone cell pedicle
GO:0045202 C synapse
GO:0055085 P transmembrane transport
GO:0060078 P regulation of postsynaptic membrane potential
GO:0071805 P potassium ion transmembrane transport
GO:0072718 P response to cisplatin
GO:1903351 P cellular response to dopamine
2737 O_BomoSK12464_complete:A_BomoSK_comp12969_c0_seq5
107bp
 uncharacterized_protein_Dpse_GA21181,_isoform_G_[Drosophila_pseudoobscura_pseudoobscura]
2738 O_BomoSK12465_complete:A_BomoSK_comp12969_c0_seq6
419bp
 PREDICTED:_potassium/sodium_hyperpolarization-activated_cyclic_nucleotide-gated_channel_2_isoform_X3_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0005216 F ion channel activity
GO:0005222 F intracellular cAMP-activated cation channel activity
GO:0005244 F voltage-gated ion channel activity
GO:0005248 F voltage-gated sodium channel activity
GO:0005249 F voltage-gated potassium channel activity
GO:0005267 F potassium channel activity
GO:0005272 F sodium channel activity
GO:0005515 F protein binding
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006813 P potassium ion transport
GO:0006814 P sodium ion transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030424 C axon
GO:0030425 C dendrite
GO:0030552 F cAMP binding
GO:0034765 P regulation of ion transmembrane transport
GO:0035725 P sodium ion transmembrane transport
GO:0042391 P regulation of membrane potential
GO:0043025 C neuronal cell body
GO:0044316 C cone cell pedicle
GO:0045202 C synapse
GO:0055085 P transmembrane transport
GO:0060078 P regulation of postsynaptic membrane potential
GO:0071805 P potassium ion transmembrane transport
GO:0072718 P response to cisplatin
GO:1903351 P cellular response to dopamine
2739 O_BomoSK12466_complete:A_BomoSK_comp12969_c0_seq6
127bp
 uncharacterized_protein_Dpse_GA21181,_isoform_G_[Drosophila_pseudoobscura_pseudoobscura]
2740 O_BomoSK12467_complete:A_BomoSK_comp12969_c0_seq6
112bp
 hypothetical_protein_BATDEDRAFT_87568_[Batrachochytrium_dendrobatidis_JAM81]
2741 O_BomoSK12468_complete:A_BomoSK_comp12970_c0_seq3
188bp
 PREDICTED:_general_transcription_factor_IIF_subunit_2_[Plutella_xylostella]
GO:0000166 F nucleotide binding
GO:0000991 F obsolete transcription factor activity, core RNA polymerase II binding
GO:0001096 F TFIIF-class transcription factor complex binding
GO:0003677 F DNA binding
GO:0003824 F catalytic activity
GO:0004003 F DNA helicase activity
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005674 C transcription factor TFIIF complex
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006366 P transcription by RNA polymerase II
GO:0006367 P transcription initiation from RNA polymerase II promoter
GO:0016787 F hydrolase activity
GO:0032508 P DNA duplex unwinding
GO:0032968 P positive regulation of transcription elongation from RNA polymerase II promoter
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0060261 P positive regulation of transcription initiation from RNA polymerase II promoter
2742 O_BomoSK12469_complete:A_BomoSK_comp12970_c0_seq4
263bp
 PREDICTED:_general_transcription_factor_IIF_subunit_2_[Plutella_xylostella]
GO:0000166 F nucleotide binding
GO:0000991 F obsolete transcription factor activity, core RNA polymerase II binding
GO:0001096 F TFIIF-class transcription factor complex binding
GO:0003677 F DNA binding
GO:0003824 F catalytic activity
GO:0004003 F DNA helicase activity
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005674 C transcription factor TFIIF complex
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006366 P transcription by RNA polymerase II
GO:0006367 P transcription initiation from RNA polymerase II promoter
GO:0016787 F hydrolase activity
GO:0032508 P DNA duplex unwinding
GO:0032968 P positive regulation of transcription elongation from RNA polymerase II promoter
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0060261 P positive regulation of transcription initiation from RNA polymerase II promoter
2743 O_BomoSK1246_complete:A_BomoSK_comp4028_c0_seq1
332bp
 mod(mdg4)_protein_[Helicoverpa_armigera]
GO:0000794 C condensed nuclear chromosome
GO:0001700 P embryonic development via the syncytial blastoderm
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005700 C polytene chromosome
GO:0006342 P heterochromatin assembly
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0007275 P multicellular organism development
GO:0007426 P tracheal outgrowth, open tracheal system
GO:0007435 P salivary gland morphogenesis
GO:0016458 P obsolete gene silencing
GO:0016568 P chromatin organization
GO:0031208 F POZ domain binding
GO:0031519 C PcG protein complex
GO:0035167 P larval lymph gland hemopoiesis
GO:0042803 F protein homodimerization activity
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0045893 P positive regulation of transcription, DNA-templated
2744 O_BomoSK12470_complete:A_BomoSK_comp12973_c0_seq1
227bp
 putative_proteasome_complex_[Operophtera_brumata]
2745 O_BomoSK12471_complete:A_BomoSK_comp12973_c0_seq2
146bp
 PREDICTED:_uncharacterized_protein_LOC106136999_[Amyelois_transitella]
2746 O_BomoSK12472_complete:A_BomoSK_comp12973_c2_seq1
224bp
 PREDICTED:_uncharacterized_protein_LOC106715797_[Papilio_machaon]
2747 O_BomoSK12473_5prime_partial:A_BomoSK_comp12975_c0_seq1
210bp
2748 O_BomoSK12474_5prime_partial:A_BomoSK_comp12975_c0_seq1
185bp
 PREDICTED:_splicing_factor_arginine/serine-rich_6_isoform_X3_[Bombyx_mori]
2749 O_BomoSK12475_3prime_partial:A_BomoSK_comp12975_c0_seq1
102bp
2750 O_BomoSK12476_complete:A_BomoSK_comp12976_c0_seq1
414bp
 PREDICTED:_tyrosine-protein_kinase_Fps85D_isoform_X4_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0004713 F protein tyrosine kinase activity
GO:0004715 F non-membrane spanning protein tyrosine kinase activity
GO:0005102 F signaling receptor binding
GO:0005524 F ATP binding
GO:0005543 F phospholipid binding
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0005912 C adherens junction
GO:0006468 P protein phosphorylation
GO:0007169 P transmembrane receptor protein tyrosine kinase signaling pathway
GO:0007275 P multicellular organism development
GO:0007391 P dorsal closure
GO:0007394 P dorsal closure, elongation of leading edge cells
GO:0007411 P axon guidance
GO:0008594 P photoreceptor cell morphogenesis
GO:0016020 C membrane
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0019898 C extrinsic component of membrane
GO:0031234 C extrinsic component of cytoplasmic side of plasma membrane
GO:0038083 P peptidyl-tyrosine autophosphorylation
GO:0042127 P regulation of cell population proliferation
GO:0045087 P innate immune response
GO:0046664 P dorsal closure, amnioserosa morphology change
GO:0051017 P actin filament bundle assembly
2751 O_BomoSK12477_complete:A_BomoSK_comp12976_c0_seq1
168bp
 hypothetical_protein_TOPH_06902_[Tolypocladium_ophioglossoides_CBS_100239]
2752 O_BomoSK12478_complete:A_BomoSK_comp12976_c0_seq2
868bp
 PREDICTED:_tyrosine-protein_kinase_Fps85D_isoform_X1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0004713 F protein tyrosine kinase activity
GO:0004715 F non-membrane spanning protein tyrosine kinase activity
GO:0005102 F signaling receptor binding
GO:0005524 F ATP binding
GO:0005543 F phospholipid binding
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0005912 C adherens junction
GO:0006468 P protein phosphorylation
GO:0007169 P transmembrane receptor protein tyrosine kinase signaling pathway
GO:0007275 P multicellular organism development
GO:0007391 P dorsal closure
GO:0007394 P dorsal closure, elongation of leading edge cells
GO:0007411 P axon guidance
GO:0008594 P photoreceptor cell morphogenesis
GO:0016020 C membrane
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0019898 C extrinsic component of membrane
GO:0031234 C extrinsic component of cytoplasmic side of plasma membrane
GO:0038083 P peptidyl-tyrosine autophosphorylation
GO:0042127 P regulation of cell population proliferation
GO:0045087 P innate immune response
GO:0046664 P dorsal closure, amnioserosa morphology change
GO:0051017 P actin filament bundle assembly
2753 O_BomoSK12479_complete:A_BomoSK_comp12976_c0_seq2
168bp
 hypothetical_protein_TOPH_06902_[Tolypocladium_ophioglossoides_CBS_100239]
2754 O_BomoSK1247_complete:A_BomoSK_comp4028_c0_seq1
106bp
 predicted_protein_[Blastomyces_gilchristii_SLH14081]
2755 O_BomoSK12480_complete:A_BomoSK_comp12976_c0_seq4
807bp
 PREDICTED:_tyrosine-protein_kinase_Fps85D_isoform_X2_[Amyelois_transitella]
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0004713 F protein tyrosine kinase activity
GO:0004715 F non-membrane spanning protein tyrosine kinase activity
GO:0005102 F signaling receptor binding
GO:0005524 F ATP binding
GO:0005543 F phospholipid binding
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0005912 C adherens junction
GO:0006468 P protein phosphorylation
GO:0007169 P transmembrane receptor protein tyrosine kinase signaling pathway
GO:0007275 P multicellular organism development
GO:0007391 P dorsal closure
GO:0007394 P dorsal closure, elongation of leading edge cells
GO:0007411 P axon guidance
GO:0008594 P photoreceptor cell morphogenesis
GO:0016020 C membrane
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0019898 C extrinsic component of membrane
GO:0031234 C extrinsic component of cytoplasmic side of plasma membrane
GO:0038083 P peptidyl-tyrosine autophosphorylation
GO:0042127 P regulation of cell population proliferation
GO:0045087 P innate immune response
GO:0046664 P dorsal closure, amnioserosa morphology change
GO:0051017 P actin filament bundle assembly
2756 O_BomoSK12481_complete:A_BomoSK_comp12976_c0_seq4
168bp
 hypothetical_protein_TOPH_06902_[Tolypocladium_ophioglossoides_CBS_100239]
2757 O_BomoSK12482_3prime_partial:A_BomoSK_comp12977_c0_seq1
459bp
 PREDICTED:_aryl_hydrocarbon_receptor_nuclear_translocator_homolog_isoform_X1_[Bombyx_mori]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000981 F DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0001077 F DNA-binding transcription activator activity, RNA polymerase II-specific
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0003705 F DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0005634 C nucleus
GO:0005667 C transcription regulator complex
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0006366 P transcription by RNA polymerase II
GO:0007417 P central nervous system development
GO:0007420 P brain development
GO:0007422 P peripheral nervous system development
GO:0007424 P open tracheal system development
GO:0007425 P epithelial cell fate determination, open tracheal system
GO:0007517 P muscle organ development
GO:0008347 P glial cell migration
GO:0017022 F myosin binding
GO:0032869 P cellular response to insulin stimulus
GO:0043234 C protein-containing complex
GO:0043565 F sequence-specific DNA binding
GO:0045676 P regulation of R7 cell differentiation
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046982 F protein heterodimerization activity
GO:0046983 F protein dimerization activity
GO:0048477 P oogenesis
GO:0048666 P neuron development
GO:0048813 P dendrite morphogenesis
GO:0060173 P limb development
GO:0071456 P cellular response to hypoxia
2758 O_BomoSK12483_5prime_partial:A_BomoSK_comp12977_c0_seq1
131bp
 hexuronate_transporter_[Dickeya_solani]
2759 O_BomoSK12484_3prime_partial:A_BomoSK_comp12977_c0_seq2
463bp
 PREDICTED:_aryl_hydrocarbon_receptor_nuclear_translocator_homolog_isoform_X4_[Bombyx_mori]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000981 F DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0001077 F DNA-binding transcription activator activity, RNA polymerase II-specific
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0003705 F DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0005634 C nucleus
GO:0005667 C transcription regulator complex
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0006366 P transcription by RNA polymerase II
GO:0007417 P central nervous system development
GO:0007420 P brain development
GO:0007422 P peripheral nervous system development
GO:0007424 P open tracheal system development
GO:0007425 P epithelial cell fate determination, open tracheal system
GO:0007517 P muscle organ development
GO:0008347 P glial cell migration
GO:0017022 F myosin binding
GO:0032869 P cellular response to insulin stimulus
GO:0043234 C protein-containing complex
GO:0043565 F sequence-specific DNA binding
GO:0045676 P regulation of R7 cell differentiation
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046982 F protein heterodimerization activity
GO:0046983 F protein dimerization activity
GO:0048477 P oogenesis
GO:0048666 P neuron development
GO:0048813 P dendrite morphogenesis
GO:0060173 P limb development
GO:0071456 P cellular response to hypoxia
2760 O_BomoSK12485_5prime_partial:A_BomoSK_comp12977_c0_seq2
131bp
 hexuronate_transporter_[Dickeya_solani]
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