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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
2671 O_BomoSK12404_complete:A_BomoSK_comp12946_c0_seq2
108bp
 hydantoinase_B/oxoprolinase_[Colletotrichum_graminicola_M1.001]
2672 O_BomoSK12405_complete:A_BomoSK_comp12946_c0_seq2
107bp
 protein_of_unknown_function_DUF250_[Cynara_cardunculus_var._scolymus]
2673 O_BomoSK12406_complete:A_BomoSK_comp12948_c0_seq1
529bp
 PREDICTED:_proton-coupled_amino_acid_transporter_4_[Bombyx_mori]
GO:0003333 P amino acid transmembrane transport
GO:0006810 P transport
GO:0006865 P amino acid transport
GO:0015171 F amino acid transmembrane transporter activity
GO:0015180 F L-alanine transmembrane transporter activity
GO:0015193 F L-proline transmembrane transporter activity
GO:0015196 F L-tryptophan transmembrane transporter activity
GO:0015293 F symporter activity
GO:0015808 P L-alanine transport
GO:0015824 P proline transport
GO:0015827 P tryptophan transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0035524 P proline transmembrane transport
2674 O_BomoSK12407_3prime_partial:A_BomoSK_comp12949_c0_seq1
125bp
 PREDICTED:_uncharacterized_protein_LOC105841658_isoform_X2_[Bombyx_mori]
2675 O_BomoSK12408_5prime_partial:A_BomoSK_comp12949_c0_seq1
107bp
 tigger_transposable_element-derived_protein_6-like_protein,_partial_[Lasius_niger]
2676 O_BomoSK12409_3prime_partial:A_BomoSK_comp12949_c0_seq2
155bp
 PREDICTED:_uncharacterized_protein_LOC105841658_isoform_X2_[Bombyx_mori]
2677 O_BomoSK1240_3prime_partial:A_BomoSK_comp4024_c0_seq1
344bp
 PREDICTED:_nuclear_receptor-binding_protein_homolog_[Bombyx_mori]
GO:0004672 F protein kinase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005938 C cell cortex
GO:0006468 P protein phosphorylation
GO:0006888 P endoplasmic reticulum to Golgi vesicle-mediated transport
GO:0012505 C endomembrane system
GO:0042803 F protein homodimerization activity
2678 O_BomoSK12410_complete:A_BomoSK_comp12951_c0_seq1
709bp
 PREDICTED:_splicing_factor_3B_subunit_3_isoform_X1_[Amyelois_transitella]
GO:0000398 P mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005681 C spliceosomal complex
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
2679 O_BomoSK12411_complete:A_BomoSK_comp12951_c0_seq1
474bp
 putative_Splicing_factor_3B_subunit_[Danaus_plexippus]
GO:0000398 P mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005681 C spliceosomal complex
GO:0005689 C U12-type spliceosomal complex
GO:0005730 C nucleolus
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0042177 P negative regulation of protein catabolic process
GO:0071013 C catalytic step 2 spliceosome
2680 O_BomoSK12412_complete:A_BomoSK_comp12951_c0_seq1
109bp
2681 O_BomoSK12413_complete:A_BomoSK_comp12951_c0_seq2
1219bp
 PREDICTED:_splicing_factor_3B_subunit_3_isoform_X1_[Amyelois_transitella]
GO:0000398 P mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005681 C spliceosomal complex
GO:0005689 C U12-type spliceosomal complex
GO:0005730 C nucleolus
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0042177 P negative regulation of protein catabolic process
GO:0071013 C catalytic step 2 spliceosome
2682 O_BomoSK12414_complete:A_BomoSK_comp12951_c0_seq2
109bp
2683 O_BomoSK12415_complete:A_BomoSK_comp12952_c0_seq1
1115bp
 PREDICTED:_tyrosine-protein_kinase_hopscotch_[Papilio_xuthus]
GO:0000166 F nucleotide binding
GO:0001745 P compound eye morphogenesis
GO:0001751 P compound eye photoreceptor cell differentiation
GO:0003383 P apical constriction
GO:0004672 F protein kinase activity
GO:0004713 F protein tyrosine kinase activity
GO:0004715 F non-membrane spanning protein tyrosine kinase activity
GO:0005102 F signaling receptor binding
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006468 P protein phosphorylation
GO:0006952 P defense response
GO:0006955 P immune response
GO:0006959 P humoral immune response
GO:0006968 P cellular defense response
GO:0007169 P transmembrane receptor protein tyrosine kinase signaling pathway
GO:0007259 P receptor signaling pathway via JAK-STAT
GO:0007260 P tyrosine phosphorylation of STAT protein
GO:0007262 P regulation of receptor signaling pathway via JAK-STAT
GO:0007275 P multicellular organism development
GO:0007298 P border follicle cell migration
GO:0007350 P blastoderm segmentation
GO:0007365 P periodic partitioning
GO:0007399 P nervous system development
GO:0007424 P open tracheal system development
GO:0007442 P hindgut morphogenesis
GO:0007455 P eye-antennal disc morphogenesis
GO:0007476 P imaginal disc-derived wing morphogenesis
GO:0007480 P imaginal disc-derived leg morphogenesis
GO:0007530 P sex determination
GO:0007538 P primary sex determination
GO:0007616 P long-term memory
GO:0008283 P cell population proliferation
GO:0012505 C endomembrane system
GO:0016020 C membrane
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016318 P ommatidial rotation
GO:0016476 P regulation of embryonic cell shape
GO:0016740 F transferase activity
GO:0019827 P stem cell population maintenance
GO:0030097 P hemopoiesis
GO:0030707 P ovarian follicle cell development
GO:0030713 P ovarian follicle cell stalk formation
GO:0031234 C extrinsic component of cytoplasmic side of plasma membrane
GO:0035010 P encapsulation of foreign target
GO:0035167 P larval lymph gland hemopoiesis
GO:0035171 P lamellocyte differentiation
GO:0035172 P hemocyte proliferation
GO:0035206 P regulation of hemocyte proliferation
GO:0038083 P peptidyl-tyrosine autophosphorylation
GO:0042067 P establishment of ommatidial planar polarity
GO:0042078 P germ-line stem cell division
GO:0042386 P hemocyte differentiation
GO:0045087 P innate immune response
GO:0045317 P equator specification
GO:0045475 P locomotor rhythm
GO:0045610 P regulation of hemocyte differentiation
GO:0046425 P regulation of receptor signaling pathway via JAK-STAT
GO:0048103 P somatic stem cell division
GO:0048477 P oogenesis
GO:0048749 P compound eye development
GO:0051607 P defense response to virus
GO:0060031 P mediolateral intercalation
2684 O_BomoSK12416_5prime_partial:A_BomoSK_comp12954_c0_seq1
181bp
 PREDICTED:_syntaxin-1A_isoform_X5_[Papilio_xuthus]
GO:0000149 F SNARE binding
GO:0000281 P mitotic cytokinesis
GO:0005484 F SNAP receptor activity
GO:0005515 F protein binding
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0006836 P neurotransmitter transport
GO:0006886 P intracellular protein transport
GO:0006887 P exocytosis
GO:0006906 P vesicle fusion
GO:0006936 P muscle contraction
GO:0007268 P chemical synaptic transmission
GO:0007269 P neurotransmitter secretion
GO:0007274 P neuromuscular synaptic transmission
GO:0007317 P regulation of pole plasm oskar mRNA localization
GO:0007349 P cellularization
GO:0007482 P haltere development
GO:0008021 C synaptic vesicle
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016081 P synaptic vesicle docking
GO:0016192 P vesicle-mediated transport
GO:0017157 P regulation of exocytosis
GO:0031201 C SNARE complex
GO:0031629 P synaptic vesicle fusion to presynaptic active zone membrane
GO:0042335 P cuticle development
GO:0043195 C terminal bouton
GO:0048278 P vesicle docking
2685 O_BomoSK12417_complete:A_BomoSK_comp12954_c0_seq2
292bp
 PREDICTED:_syntaxin-1A_isoform_X5_[Papilio_xuthus]
GO:0000149 F SNARE binding
GO:0000281 P mitotic cytokinesis
GO:0005484 F SNAP receptor activity
GO:0005515 F protein binding
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0006836 P neurotransmitter transport
GO:0006886 P intracellular protein transport
GO:0006887 P exocytosis
GO:0006906 P vesicle fusion
GO:0006936 P muscle contraction
GO:0007268 P chemical synaptic transmission
GO:0007269 P neurotransmitter secretion
GO:0007274 P neuromuscular synaptic transmission
GO:0007317 P regulation of pole plasm oskar mRNA localization
GO:0007349 P cellularization
GO:0007482 P haltere development
GO:0008021 C synaptic vesicle
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016081 P synaptic vesicle docking
GO:0016192 P vesicle-mediated transport
GO:0017157 P regulation of exocytosis
GO:0031201 C SNARE complex
GO:0031629 P synaptic vesicle fusion to presynaptic active zone membrane
GO:0042335 P cuticle development
GO:0043195 C terminal bouton
GO:0048278 P vesicle docking
2686 O_BomoSK12418_5prime_partial:A_BomoSK_comp12955_c0_seq1
195bp
 PREDICTED:_protein_cereblon_homolog_isoform_X1_[Bombyx_mori]
GO:0046872 F metal ion binding
2687 O_BomoSK12419_5prime_partial:A_BomoSK_comp12955_c0_seq2
120bp
 hypothetical_protein_[Roseomonas_aerilata]
2688 O_BomoSK1241_5prime_partial:A_BomoSK_comp4024_c0_seq1
113bp
 putative_proteorhodopsin_[uncultured_bacterium]
2689 O_BomoSK12420_5prime_partial:A_BomoSK_comp12955_c0_seq2
117bp
 PREDICTED:_protein_cereblon_homolog_isoform_X1_[Bombyx_mori]
2690 O_BomoSK12421_complete:A_BomoSK_comp12955_c0_seq2
107bp
 PREDICTED:_RNMT-activating_mini_protein_isoform_X2_[Amyelois_transitella]
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005845 C mRNA cap binding complex
GO:0006370 P 7-methylguanosine mRNA capping
GO:0006397 P mRNA processing
GO:0032259 P methylation
GO:0036031 P recruitment of mRNA capping enzyme to RNA polymerase II holoenzyme complex
2691 O_BomoSK12422_5prime_partial:A_BomoSK_comp12955_c0_seq3
120bp
 hypothetical_protein_[Roseomonas_aerilata]
2692 O_BomoSK12423_complete:A_BomoSK_comp12955_c0_seq3
107bp
 PREDICTED:_RNMT-activating_mini_protein_isoform_X2_[Amyelois_transitella]
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005845 C mRNA cap binding complex
GO:0006370 P 7-methylguanosine mRNA capping
GO:0006397 P mRNA processing
GO:0032259 P methylation
GO:0036031 P recruitment of mRNA capping enzyme to RNA polymerase II holoenzyme complex
2693 O_BomoSK12424_complete:A_BomoSK_comp12957_c0_seq1
358bp
 PREDICTED:_uncharacterized_protein_LOC106123270_[Papilio_xuthus]
2694 O_BomoSK12425_complete:A_BomoSK_comp12957_c0_seq1
325bp
 PREDICTED:_uncharacterized_protein_LOC106105015_[Papilio_polytes]
2695 O_BomoSK12426_complete:A_BomoSK_comp12957_c0_seq2
433bp
 PREDICTED:_uncharacterized_protein_LOC106123270_[Papilio_xuthus]
2696 O_BomoSK12427_complete:A_BomoSK_comp12957_c0_seq3
752bp
 PREDICTED:_uncharacterized_protein_LOC106105015_[Papilio_polytes]
2697 O_BomoSK12428_complete:A_BomoSK_comp12959_c0_seq1
159bp
 PREDICTED:_putative_riboflavin_kinase_[Plutella_xylostella]
GO:0000166 F nucleotide binding
GO:0005524 F ATP binding
GO:0005575 C cellular_component
GO:0005737 C cytoplasm
GO:0008531 F riboflavin kinase activity
GO:0009231 P riboflavin biosynthetic process
GO:0009398 P FMN biosynthetic process
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0046872 F metal ion binding
2698 O_BomoSK12429_complete:A_BomoSK_comp12959_c0_seq1
159bp
 PREDICTED:_putative_riboflavin_kinase_[Plutella_xylostella]
GO:0000166 F nucleotide binding
GO:0005524 F ATP binding
GO:0005575 C cellular_component
GO:0005737 C cytoplasm
GO:0008531 F riboflavin kinase activity
GO:0009231 P riboflavin biosynthetic process
GO:0009398 P FMN biosynthetic process
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0046872 F metal ion binding
2699 O_BomoSK1242_3prime_partial:A_BomoSK_comp4026_c0_seq1
489bp
 PREDICTED:_malate_synthase,_glyoxysomal-like_isoform_X2_[Bombyx_mori]
GO:0003824 F catalytic activity
GO:0004474 F malate synthase activity
GO:0005737 C cytoplasm
GO:0006097 P glyoxylate cycle
GO:0006099 P tricarboxylic acid cycle
GO:0016740 F transferase activity
2700 O_BomoSK12430_complete:A_BomoSK_comp12959_c1_seq1
552bp
 PREDICTED:_endonuclease/exonuclease/phosphatase_family_domain-containing_protein_1-like_[Papilio_machaon]
GO:0003677 F DNA binding
GO:0006281 P DNA repair
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