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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
2101 O_BomoSK11892_complete:A_BomoSK_comp12771_c0_seq1
152bp
 ubiquitin_conjugating_enzyme_E2_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000209 P protein polyubiquitination
GO:0004842 F ubiquitin-protein transferase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0006301 P postreplication repair
GO:0006979 P response to oxidative stress
GO:0007409 P axonogenesis
GO:0007412 P axon target recognition
GO:0007625 P grooming behavior
GO:0007629 P flight behavior
GO:0007630 P jump response
GO:0008594 P photoreceptor cell morphogenesis
GO:0010942 P positive regulation of cell death
GO:0016567 P protein ubiquitination
GO:0016740 F transferase activity
GO:0031624 F ubiquitin conjugating enzyme binding
GO:0031625 F ubiquitin protein ligase binding
GO:0035370 C UBC13-UEV1A complex
GO:0045977 P positive regulation of mitotic cell cycle, embryonic
GO:0046330 P positive regulation of JNK cascade
GO:0048471 C perinuclear region of cytoplasm
GO:0051124 P synaptic assembly at neuromuscular junction
GO:0060074 P synapse maturation
GO:0061630 F ubiquitin protein ligase activity
GO:0070534 P protein K63-linked ubiquitination
GO:0072347 P response to anesthetic
GO:1902916 P positive regulation of protein polyubiquitination
2102 O_BomoSK11893_complete:A_BomoSK_comp12772_c0_seq1
108bp
 hypothetical_protein_FPSE_03136_[Fusarium_pseudograminearum_CS3096]
2103 O_BomoSK11894_complete:A_BomoSK_comp12773_c0_seq1
214bp
 PREDICTED:_ras-related_protein_Rab-14_[Papilio_xuthus]
GO:0000139 C Golgi membrane
GO:0000166 F nucleotide binding
GO:0003924 F GTPase activity
GO:0005525 F GTP binding
GO:0005622 C intracellular anatomical structure
GO:0005768 C endosome
GO:0005794 C Golgi apparatus
GO:0005802 C trans-Golgi network
GO:0005829 C cytosol
GO:0006810 P transport
GO:0006886 P intracellular protein transport
GO:0006895 P Golgi to endosome transport
GO:0006913 P nucleocytoplasmic transport
GO:0007165 P signal transduction
GO:0007264 P small GTPase mediated signal transduction
GO:0008152 P metabolic process
GO:0008543 P fibroblast growth factor receptor signaling pathway
GO:0009790 P embryo development
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0019003 F GDP binding
GO:0031410 C cytoplasmic vesicle
GO:0031901 C early endosome membrane
GO:0032456 P endocytic recycling
GO:0032880 P regulation of protein localization
GO:0042742 P defense response to bacterium
GO:0045335 C phagocytic vesicle
GO:0055037 C recycling endosome
GO:0090382 P phagosome maturation
2104 O_BomoSK11895_complete:A_BomoSK_comp12773_c0_seq2
214bp
 PREDICTED:_ras-related_protein_Rab-14_[Papilio_xuthus]
GO:0000139 C Golgi membrane
GO:0000166 F nucleotide binding
GO:0003924 F GTPase activity
GO:0005525 F GTP binding
GO:0005622 C intracellular anatomical structure
GO:0005768 C endosome
GO:0005794 C Golgi apparatus
GO:0005802 C trans-Golgi network
GO:0005829 C cytosol
GO:0006810 P transport
GO:0006886 P intracellular protein transport
GO:0006895 P Golgi to endosome transport
GO:0006913 P nucleocytoplasmic transport
GO:0007165 P signal transduction
GO:0007264 P small GTPase mediated signal transduction
GO:0008152 P metabolic process
GO:0008543 P fibroblast growth factor receptor signaling pathway
GO:0009790 P embryo development
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0019003 F GDP binding
GO:0031410 C cytoplasmic vesicle
GO:0031901 C early endosome membrane
GO:0032456 P endocytic recycling
GO:0032880 P regulation of protein localization
GO:0042742 P defense response to bacterium
GO:0045335 C phagocytic vesicle
GO:0055037 C recycling endosome
GO:0090382 P phagosome maturation
2105 O_BomoSK11896_complete:A_BomoSK_comp12773_c0_seq3
214bp
 PREDICTED:_ras-related_protein_Rab-14_[Papilio_xuthus]
GO:0000139 C Golgi membrane
GO:0000166 F nucleotide binding
GO:0003924 F GTPase activity
GO:0005525 F GTP binding
GO:0005622 C intracellular anatomical structure
GO:0005768 C endosome
GO:0005794 C Golgi apparatus
GO:0005802 C trans-Golgi network
GO:0005829 C cytosol
GO:0006810 P transport
GO:0006886 P intracellular protein transport
GO:0006895 P Golgi to endosome transport
GO:0006913 P nucleocytoplasmic transport
GO:0007165 P signal transduction
GO:0007264 P small GTPase mediated signal transduction
GO:0008152 P metabolic process
GO:0008543 P fibroblast growth factor receptor signaling pathway
GO:0009790 P embryo development
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0019003 F GDP binding
GO:0031410 C cytoplasmic vesicle
GO:0031901 C early endosome membrane
GO:0032456 P endocytic recycling
GO:0032880 P regulation of protein localization
GO:0042742 P defense response to bacterium
GO:0045335 C phagocytic vesicle
GO:0055037 C recycling endosome
GO:0090382 P phagosome maturation
2106 O_BomoSK11897_complete:A_BomoSK_comp12773_c0_seq4
214bp
 PREDICTED:_ras-related_protein_Rab-14_[Papilio_xuthus]
GO:0000139 C Golgi membrane
GO:0000166 F nucleotide binding
GO:0003924 F GTPase activity
GO:0005525 F GTP binding
GO:0005622 C intracellular anatomical structure
GO:0005768 C endosome
GO:0005794 C Golgi apparatus
GO:0005802 C trans-Golgi network
GO:0005829 C cytosol
GO:0006810 P transport
GO:0006886 P intracellular protein transport
GO:0006895 P Golgi to endosome transport
GO:0006913 P nucleocytoplasmic transport
GO:0007165 P signal transduction
GO:0007264 P small GTPase mediated signal transduction
GO:0008152 P metabolic process
GO:0008543 P fibroblast growth factor receptor signaling pathway
GO:0009790 P embryo development
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0019003 F GDP binding
GO:0031410 C cytoplasmic vesicle
GO:0031901 C early endosome membrane
GO:0032456 P endocytic recycling
GO:0032880 P regulation of protein localization
GO:0042742 P defense response to bacterium
GO:0045335 C phagocytic vesicle
GO:0055037 C recycling endosome
GO:0090382 P phagosome maturation
2107 O_BomoSK11898_3prime_partial:A_BomoSK_comp12774_c0_seq2
523bp
 PREDICTED:_LOW_QUALITY_PROTEIN:_protein_diaphanous_[Bombyx_mori]
GO:0000281 P mitotic cytokinesis
GO:0000915 P actomyosin contractile ring assembly
GO:0003383 P apical constriction
GO:0003779 F actin binding
GO:0005515 F protein binding
GO:0005546 F phosphatidylinositol-4,5-bisphosphate binding
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005884 C actin filament
GO:0005912 C adherens junction
GO:0005938 C cell cortex
GO:0007015 P actin filament organization
GO:0007049 P cell cycle
GO:0007110 P meiosis I cytokinesis
GO:0007111 P meiosis II cytokinesis
GO:0007279 P pole cell formation
GO:0007283 P spermatogenesis
GO:0007349 P cellularization
GO:0007424 P open tracheal system development
GO:0007605 P sensory perception of sound
GO:0008104 P protein localization
GO:0009306 P protein secretion
GO:0012506 C vesicle membrane
GO:0016043 P cellular component organization
GO:0016324 C apical plasma membrane
GO:0016476 P regulation of embryonic cell shape
GO:0017048 F small GTPase binding
GO:0022008 P neurogenesis
GO:0030036 P actin cytoskeleton organization
GO:0030589 P pseudocleavage involved in syncytial blastoderm formation
GO:0030838 P positive regulation of actin filament polymerization
GO:0031532 P actin cytoskeleton reorganization
GO:0032154 C cleavage furrow
GO:0032507 P maintenance of protein location in cell
GO:0035011 P melanotic encapsulation of foreign target
GO:0035230 C cytoneme
GO:0043234 C protein-containing complex
GO:0045010 P actin nucleation
GO:0045177 C apical part of cell
GO:0045448 P mitotic cell cycle, embryonic
GO:0051225 P spindle assembly
GO:0051301 P cell division
GO:0051489 P regulation of filopodium assembly
GO:0090303 P positive regulation of wound healing
GO:0097320 P plasma membrane tubulation
2108 O_BomoSK11899_5prime_partial:A_BomoSK_comp12774_c0_seq2
285bp
 hypothetical_protein_[Bosea_sp._Root381]
2109 O_BomoSK1189_complete:A_BomoSK_comp3975_c0_seq1
102bp
 coatomer_subunit_gamma_[Kluyveromyces_marxianus]
2110 O_BomoSK118_internal:A_BomoSK_comp407_c1_seq1
117bp
 S33901_reverse_transcriptase_-_silkworm_transposon_Pao
2111 O_BomoSK11900_complete:A_BomoSK_comp12774_c0_seq2
127bp
 PREDICTED:_host_cell_factor_1-like_[Amphimedon_queenslandica]
2112 O_BomoSK11901_5prime_partial:A_BomoSK_comp12774_c0_seq2
104bp
2113 O_BomoSK11902_3prime_partial:A_BomoSK_comp12774_c0_seq3
520bp
 PREDICTED:_LOW_QUALITY_PROTEIN:_protein_diaphanous_[Bombyx_mori]
GO:0000281 P mitotic cytokinesis
GO:0000915 P actomyosin contractile ring assembly
GO:0003383 P apical constriction
GO:0003779 F actin binding
GO:0005515 F protein binding
GO:0005546 F phosphatidylinositol-4,5-bisphosphate binding
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005884 C actin filament
GO:0005912 C adherens junction
GO:0005938 C cell cortex
GO:0007015 P actin filament organization
GO:0007049 P cell cycle
GO:0007110 P meiosis I cytokinesis
GO:0007111 P meiosis II cytokinesis
GO:0007279 P pole cell formation
GO:0007283 P spermatogenesis
GO:0007349 P cellularization
GO:0007424 P open tracheal system development
GO:0007605 P sensory perception of sound
GO:0008104 P protein localization
GO:0009306 P protein secretion
GO:0012506 C vesicle membrane
GO:0016043 P cellular component organization
GO:0016324 C apical plasma membrane
GO:0016476 P regulation of embryonic cell shape
GO:0017048 F small GTPase binding
GO:0022008 P neurogenesis
GO:0030036 P actin cytoskeleton organization
GO:0030589 P pseudocleavage involved in syncytial blastoderm formation
GO:0030838 P positive regulation of actin filament polymerization
GO:0031532 P actin cytoskeleton reorganization
GO:0032154 C cleavage furrow
GO:0032507 P maintenance of protein location in cell
GO:0035011 P melanotic encapsulation of foreign target
GO:0035230 C cytoneme
GO:0043234 C protein-containing complex
GO:0045010 P actin nucleation
GO:0045177 C apical part of cell
GO:0045448 P mitotic cell cycle, embryonic
GO:0051225 P spindle assembly
GO:0051301 P cell division
GO:0051489 P regulation of filopodium assembly
GO:0090303 P positive regulation of wound healing
GO:0097320 P plasma membrane tubulation
2114 O_BomoSK11903_5prime_partial:A_BomoSK_comp12774_c0_seq3
285bp
 hypothetical_protein_[Bosea_sp._Root381]
2115 O_BomoSK11904_complete:A_BomoSK_comp12774_c0_seq3
127bp
 PREDICTED:_host_cell_factor_1-like_[Amphimedon_queenslandica]
2116 O_BomoSK11905_5prime_partial:A_BomoSK_comp12774_c0_seq3
104bp
2117 O_BomoSK11906_3prime_partial:A_BomoSK_comp12774_c0_seq5
520bp
 PREDICTED:_LOW_QUALITY_PROTEIN:_protein_diaphanous_[Bombyx_mori]
GO:0000281 P mitotic cytokinesis
GO:0000915 P actomyosin contractile ring assembly
GO:0003383 P apical constriction
GO:0003779 F actin binding
GO:0005515 F protein binding
GO:0005546 F phosphatidylinositol-4,5-bisphosphate binding
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005884 C actin filament
GO:0005912 C adherens junction
GO:0005938 C cell cortex
GO:0007015 P actin filament organization
GO:0007049 P cell cycle
GO:0007110 P meiosis I cytokinesis
GO:0007111 P meiosis II cytokinesis
GO:0007279 P pole cell formation
GO:0007283 P spermatogenesis
GO:0007349 P cellularization
GO:0007424 P open tracheal system development
GO:0007605 P sensory perception of sound
GO:0008104 P protein localization
GO:0009306 P protein secretion
GO:0012506 C vesicle membrane
GO:0016043 P cellular component organization
GO:0016324 C apical plasma membrane
GO:0016476 P regulation of embryonic cell shape
GO:0017048 F small GTPase binding
GO:0022008 P neurogenesis
GO:0030036 P actin cytoskeleton organization
GO:0030589 P pseudocleavage involved in syncytial blastoderm formation
GO:0030838 P positive regulation of actin filament polymerization
GO:0031532 P actin cytoskeleton reorganization
GO:0032154 C cleavage furrow
GO:0032507 P maintenance of protein location in cell
GO:0035011 P melanotic encapsulation of foreign target
GO:0035230 C cytoneme
GO:0043234 C protein-containing complex
GO:0045010 P actin nucleation
GO:0045177 C apical part of cell
GO:0045448 P mitotic cell cycle, embryonic
GO:0051225 P spindle assembly
GO:0051301 P cell division
GO:0051489 P regulation of filopodium assembly
GO:0090303 P positive regulation of wound healing
GO:0097320 P plasma membrane tubulation
2118 O_BomoSK11907_5prime_partial:A_BomoSK_comp12774_c0_seq5
285bp
 hypothetical_protein_[Bosea_sp._Root381]
2119 O_BomoSK11908_complete:A_BomoSK_comp12774_c0_seq5
127bp
 PREDICTED:_host_cell_factor_1-like_[Amphimedon_queenslandica]
2120 O_BomoSK11909_5prime_partial:A_BomoSK_comp12774_c0_seq5
104bp
2121 O_BomoSK1190_5prime_partial:A_BomoSK_comp3980_c0_seq2
451bp
 PREDICTED:_tRNA_(adenine(58)-N(1))-methyltransferase_non-catalytic_subunit_TRM6_[Bombyx_mori]
GO:0005575 C cellular_component
GO:0005634 C nucleus
GO:0008033 P tRNA processing
GO:0030488 P tRNA methylation
GO:0031515 C tRNA (m1A) methyltransferase complex
GO:0044822 F RNA binding
2122 O_BomoSK11910_3prime_partial:A_BomoSK_comp12774_c0_seq6
443bp
 PREDICTED:_LOW_QUALITY_PROTEIN:_protein_diaphanous_[Bombyx_mori]
GO:0000281 P mitotic cytokinesis
GO:0000915 P actomyosin contractile ring assembly
GO:0003383 P apical constriction
GO:0003779 F actin binding
GO:0005515 F protein binding
GO:0005546 F phosphatidylinositol-4,5-bisphosphate binding
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005884 C actin filament
GO:0005912 C adherens junction
GO:0005938 C cell cortex
GO:0007015 P actin filament organization
GO:0007049 P cell cycle
GO:0007110 P meiosis I cytokinesis
GO:0007111 P meiosis II cytokinesis
GO:0007279 P pole cell formation
GO:0007283 P spermatogenesis
GO:0007349 P cellularization
GO:0007424 P open tracheal system development
GO:0007605 P sensory perception of sound
GO:0008104 P protein localization
GO:0009306 P protein secretion
GO:0012506 C vesicle membrane
GO:0016043 P cellular component organization
GO:0016324 C apical plasma membrane
GO:0016476 P regulation of embryonic cell shape
GO:0017048 F small GTPase binding
GO:0022008 P neurogenesis
GO:0030036 P actin cytoskeleton organization
GO:0030589 P pseudocleavage involved in syncytial blastoderm formation
GO:0030838 P positive regulation of actin filament polymerization
GO:0031532 P actin cytoskeleton reorganization
GO:0032154 C cleavage furrow
GO:0032507 P maintenance of protein location in cell
GO:0035011 P melanotic encapsulation of foreign target
GO:0035230 C cytoneme
GO:0043234 C protein-containing complex
GO:0045010 P actin nucleation
GO:0045177 C apical part of cell
GO:0045448 P mitotic cell cycle, embryonic
GO:0051225 P spindle assembly
GO:0051301 P cell division
GO:0051489 P regulation of filopodium assembly
GO:0090303 P positive regulation of wound healing
GO:0097320 P plasma membrane tubulation
2123 O_BomoSK11911_5prime_partial:A_BomoSK_comp12774_c0_seq6
285bp
 hypothetical_protein_[Bosea_sp._Root381]
2124 O_BomoSK11912_complete:A_BomoSK_comp12774_c0_seq6
127bp
 PREDICTED:_host_cell_factor_1-like_[Amphimedon_queenslandica]
2125 O_BomoSK11913_5prime_partial:A_BomoSK_comp12774_c0_seq6
104bp
2126 O_BomoSK11914_internal:A_BomoSK_comp12774_c1_seq1
472bp
 PREDICTED:_LOW_QUALITY_PROTEIN:_protein_diaphanous_[Bombyx_mori]
GO:0000281 P mitotic cytokinesis
GO:0000915 P actomyosin contractile ring assembly
GO:0003383 P apical constriction
GO:0003779 F actin binding
GO:0005515 F protein binding
GO:0005546 F phosphatidylinositol-4,5-bisphosphate binding
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005884 C actin filament
GO:0005912 C adherens junction
GO:0005938 C cell cortex
GO:0007015 P actin filament organization
GO:0007049 P cell cycle
GO:0007110 P meiosis I cytokinesis
GO:0007111 P meiosis II cytokinesis
GO:0007279 P pole cell formation
GO:0007283 P spermatogenesis
GO:0007349 P cellularization
GO:0007424 P open tracheal system development
GO:0007605 P sensory perception of sound
GO:0008104 P protein localization
GO:0009306 P protein secretion
GO:0012506 C vesicle membrane
GO:0016043 P cellular component organization
GO:0016324 C apical plasma membrane
GO:0016476 P regulation of embryonic cell shape
GO:0017048 F small GTPase binding
GO:0022008 P neurogenesis
GO:0030036 P actin cytoskeleton organization
GO:0030589 P pseudocleavage involved in syncytial blastoderm formation
GO:0030838 P positive regulation of actin filament polymerization
GO:0031532 P actin cytoskeleton reorganization
GO:0032154 C cleavage furrow
GO:0032507 P maintenance of protein location in cell
GO:0035011 P melanotic encapsulation of foreign target
GO:0035230 C cytoneme
GO:0043234 C protein-containing complex
GO:0045010 P actin nucleation
GO:0045177 C apical part of cell
GO:0045448 P mitotic cell cycle, embryonic
GO:0051225 P spindle assembly
GO:0051301 P cell division
GO:0051489 P regulation of filopodium assembly
GO:0090303 P positive regulation of wound healing
GO:0097320 P plasma membrane tubulation
2127 O_BomoSK11915_5prime_partial:A_BomoSK_comp12774_c1_seq1
102bp
 glutamine-synthetase_adenylyltransferase_[Aurantimonas_manganoxydans]
2128 O_BomoSK11916_3prime_partial:A_BomoSK_comp12775_c0_seq1
425bp
 PREDICTED:_E3_ubiquitin-protein_ligase_TRIP12_isoform_X3_[Bombyx_mori]
2129 O_BomoSK11917_3prime_partial:A_BomoSK_comp12775_c0_seq2
425bp
 PREDICTED:_E3_ubiquitin-protein_ligase_TRIP12_isoform_X3_[Bombyx_mori]
2130 O_BomoSK11918_complete:A_BomoSK_comp12776_c0_seq1
194bp
 partner_of_Y14_and_mago_[Bombyx_mori]
GO:0000184 P nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0035145 C exon-exon junction complex
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