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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
1921 O_BomoSK1172_complete:A_BomoSK_comp3966_c0_seq1
289bp
 cleavage_and_polyadenylation_specific_factor_4_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0004521 F endoribonuclease activity
GO:0005634 C nucleus
GO:0005847 C mRNA cleavage and polyadenylation specificity factor complex
GO:0006378 P mRNA polyadenylation
GO:0006379 P mRNA cleavage
GO:0006397 P mRNA processing
GO:0007275 P multicellular organism development
GO:0008270 F zinc ion binding
GO:0016787 F hydrolase activity
GO:0022008 P neurogenesis
GO:0046872 F metal ion binding
GO:0090502 P RNA phosphodiester bond hydrolysis, endonucleolytic
1922 O_BomoSK11730_complete:A_BomoSK_comp12717_c0_seq1
150bp
 PREDICTED:_putative_transporter_SVOPL_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0005215 F transporter activity
GO:0005524 F ATP binding
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0006811 P ion transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0022857 F transmembrane transporter activity
GO:0022891 F transmembrane transporter activity
GO:0055085 P transmembrane transport
GO:0090416 F nicotinate transmembrane transporter activity
GO:0090417 F N-methylnicotinate transmembrane transporter activity
GO:2001142 P nicotinate transport
GO:2001143 P N-methylnicotinate transport
1923 O_BomoSK11731_complete:A_BomoSK_comp12717_c0_seq1
106bp
 hypothetical_protein_[Empedobacter_brevis]
1924 O_BomoSK11732_complete:A_BomoSK_comp12717_c0_seq2
308bp
 PREDICTED:_synaptic_vesicle_glycoprotein_2C-like_isoform_X2_[Bombyx_mori]
1925 O_BomoSK11733_complete:A_BomoSK_comp12717_c0_seq2
150bp
 PREDICTED:_putative_transporter_SVOPL_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0005215 F transporter activity
GO:0005524 F ATP binding
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0006811 P ion transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0022857 F transmembrane transporter activity
GO:0022891 F transmembrane transporter activity
GO:0055085 P transmembrane transport
GO:0090416 F nicotinate transmembrane transporter activity
GO:0090417 F N-methylnicotinate transmembrane transporter activity
GO:2001142 P nicotinate transport
GO:2001143 P N-methylnicotinate transport
1926 O_BomoSK11734_complete:A_BomoSK_comp12717_c0_seq2
106bp
 hypothetical_protein_[Empedobacter_brevis]
1927 O_BomoSK11735_complete:A_BomoSK_comp12717_c0_seq3
499bp
 PREDICTED:_synaptic_vesicle_glycoprotein_2C-like_isoform_X2_[Bombyx_mori]
GO:0005215 F transporter activity
GO:0006810 P transport
GO:0006836 P neurotransmitter transport
GO:0007268 P chemical synaptic transmission
GO:0008021 C synaptic vesicle
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0022857 F transmembrane transporter activity
GO:0030054 C cell junction
GO:0030672 C synaptic vesicle membrane
GO:0031410 C cytoplasmic vesicle
GO:0045202 C synapse
GO:0055085 P transmembrane transport
1928 O_BomoSK11736_complete:A_BomoSK_comp12717_c0_seq3
106bp
 hypothetical_protein_[Empedobacter_brevis]
1929 O_BomoSK11737_complete:A_BomoSK_comp12717_c0_seq4
499bp
 PREDICTED:_synaptic_vesicle_glycoprotein_2C-like_isoform_X2_[Bombyx_mori]
GO:0005215 F transporter activity
GO:0006810 P transport
GO:0006836 P neurotransmitter transport
GO:0007268 P chemical synaptic transmission
GO:0008021 C synaptic vesicle
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0022857 F transmembrane transporter activity
GO:0030054 C cell junction
GO:0030672 C synaptic vesicle membrane
GO:0031410 C cytoplasmic vesicle
GO:0045202 C synapse
GO:0055085 P transmembrane transport
1930 O_BomoSK11738_complete:A_BomoSK_comp12717_c0_seq4
106bp
 hypothetical_protein_[Empedobacter_brevis]
1931 O_BomoSK11739_complete:A_BomoSK_comp12717_c0_seq5
121bp
 PREDICTED:_putative_transporter_SVOPL_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0005215 F transporter activity
GO:0005524 F ATP binding
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0006811 P ion transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0022857 F transmembrane transporter activity
GO:0022891 F transmembrane transporter activity
GO:0055085 P transmembrane transport
GO:0090416 F nicotinate transmembrane transporter activity
GO:0090417 F N-methylnicotinate transmembrane transporter activity
GO:2001142 P nicotinate transport
GO:2001143 P N-methylnicotinate transport
1932 O_BomoSK1173_complete:A_BomoSK_comp3966_c0_seq1
100bp
 hypothetical_protein_[Nocardioides_sp._URHA0032]
1933 O_BomoSK11740_complete:A_BomoSK_comp12717_c0_seq6
121bp
 PREDICTED:_putative_transporter_SVOPL_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0005215 F transporter activity
GO:0005524 F ATP binding
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0006811 P ion transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0022857 F transmembrane transporter activity
GO:0022891 F transmembrane transporter activity
GO:0055085 P transmembrane transport
GO:0090416 F nicotinate transmembrane transporter activity
GO:0090417 F N-methylnicotinate transmembrane transporter activity
GO:2001142 P nicotinate transport
GO:2001143 P N-methylnicotinate transport
1934 O_BomoSK11741_complete:A_BomoSK_comp12719_c0_seq1
533bp
 PREDICTED:_peroxisomal_targeting_signal_1_receptor_[Amyelois_transitella]
GO:0005052 F peroxisome matrix targeting signal-1 binding
GO:0005622 C intracellular anatomical structure
GO:0005737 C cytoplasm
GO:0005777 C peroxisome
GO:0005778 C peroxisomal membrane
GO:0005782 C peroxisomal matrix
GO:0005829 C cytosol
GO:0006625 P protein targeting to peroxisome
GO:0006810 P transport
GO:0008022 F protein C-terminus binding
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016561 P protein import into peroxisome matrix, translocation
GO:0051262 P protein tetramerization
1935 O_BomoSK11742_5prime_partial:A_BomoSK_comp12719_c0_seq1
365bp
 PREDICTED:_probable_tRNA_(uracil-O(2)-)-methyltransferase_isoform_X1_[Amyelois_transitella]
GO:0005737 C cytoplasm
GO:0008033 P tRNA processing
GO:0008168 F methyltransferase activity
GO:0016740 F transferase activity
GO:0032259 P methylation
GO:0046872 F metal ion binding
1936 O_BomoSK11743_complete:A_BomoSK_comp12719_c0_seq2
533bp
 PREDICTED:_peroxisomal_targeting_signal_1_receptor_[Amyelois_transitella]
GO:0005052 F peroxisome matrix targeting signal-1 binding
GO:0005622 C intracellular anatomical structure
GO:0005737 C cytoplasm
GO:0005777 C peroxisome
GO:0005778 C peroxisomal membrane
GO:0005782 C peroxisomal matrix
GO:0005829 C cytosol
GO:0006625 P protein targeting to peroxisome
GO:0006810 P transport
GO:0008022 F protein C-terminus binding
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016561 P protein import into peroxisome matrix, translocation
GO:0051262 P protein tetramerization
1937 O_BomoSK11744_complete:A_BomoSK_comp12719_c0_seq2
440bp
 PREDICTED:_probable_tRNA_(uracil-O(2)-)-methyltransferase_[Plutella_xylostella]
GO:0005737 C cytoplasm
GO:0008033 P tRNA processing
GO:0008168 F methyltransferase activity
GO:0016300 F tRNA (uracil) methyltransferase activity
GO:0016740 F transferase activity
GO:0030488 P tRNA methylation
GO:0032259 P methylation
GO:0046872 F metal ion binding
1938 O_BomoSK11745_complete:A_BomoSK_comp12719_c0_seq3
533bp
 PREDICTED:_peroxisomal_targeting_signal_1_receptor_[Amyelois_transitella]
GO:0005052 F peroxisome matrix targeting signal-1 binding
GO:0005622 C intracellular anatomical structure
GO:0005737 C cytoplasm
GO:0005777 C peroxisome
GO:0005778 C peroxisomal membrane
GO:0005782 C peroxisomal matrix
GO:0005829 C cytosol
GO:0006625 P protein targeting to peroxisome
GO:0006810 P transport
GO:0008022 F protein C-terminus binding
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016561 P protein import into peroxisome matrix, translocation
GO:0051262 P protein tetramerization
1939 O_BomoSK11746_complete:A_BomoSK_comp12719_c0_seq3
216bp
 PREDICTED:_probable_tRNA_(uracil-O(2)-)-methyltransferase_[Plutella_xylostella]
GO:0005575 C cellular_component
GO:0005737 C cytoplasm
GO:0008033 P tRNA processing
GO:0008168 F methyltransferase activity
GO:0016300 F tRNA (uracil) methyltransferase activity
GO:0016740 F transferase activity
GO:0030488 P tRNA methylation
GO:0032259 P methylation
GO:0046872 F metal ion binding
1940 O_BomoSK11747_5prime_partial:A_BomoSK_comp12719_c0_seq4
589bp
 PREDICTED:_probable_tRNA_(uracil-O(2)-)-methyltransferase_isoform_X1_[Amyelois_transitella]
GO:0005737 C cytoplasm
GO:0008033 P tRNA processing
GO:0008168 F methyltransferase activity
GO:0016300 F tRNA (uracil) methyltransferase activity
GO:0016740 F transferase activity
GO:0030488 P tRNA methylation
GO:0032259 P methylation
GO:0046872 F metal ion binding
1941 O_BomoSK11748_complete:A_BomoSK_comp12719_c0_seq4
533bp
 PREDICTED:_peroxisomal_targeting_signal_1_receptor_[Amyelois_transitella]
GO:0005052 F peroxisome matrix targeting signal-1 binding
GO:0005622 C intracellular anatomical structure
GO:0005737 C cytoplasm
GO:0005777 C peroxisome
GO:0005778 C peroxisomal membrane
GO:0005782 C peroxisomal matrix
GO:0005829 C cytosol
GO:0006625 P protein targeting to peroxisome
GO:0006810 P transport
GO:0008022 F protein C-terminus binding
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016561 P protein import into peroxisome matrix, translocation
GO:0051262 P protein tetramerization
1942 O_BomoSK11749_complete:A_BomoSK_comp12720_c0_seq1
792bp
 PREDICTED:_LOW_QUALITY_PROTEIN:_monocarboxylate_transporter_14-like_[Bombyx_mori]
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0008028 F monocarboxylic acid transmembrane transporter activity
GO:0015293 F symporter activity
GO:0015718 P monocarboxylic acid transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0055085 P transmembrane transport
1943 O_BomoSK1174_3prime_partial:A_BomoSK_comp3968_c0_seq2
142bp
 PREDICTED:_SAGA-associated_factor_29_homolog_isoform_X1_[Bombyx_mori]
GO:0005634 C nucleus
GO:0005671 C obsolete Ada2/Gcn5/Ada3 transcription activator complex
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0016568 P chromatin organization
GO:0019899 F enzyme binding
GO:0035064 F methylated histone binding
GO:0043966 P histone H3 acetylation
GO:0047485 F protein N-terminus binding
GO:0070461 C SAGA-type complex
1944 O_BomoSK11750_complete:A_BomoSK_comp12720_c0_seq1
117bp
 putative_phosphatidylinositol_transfer_protein_Sec14_[Mitosporidium_daphniae]
1945 O_BomoSK11751_5prime_partial:A_BomoSK_comp12721_c0_seq1
1298bp
 PREDICTED:_myosin-VIIa_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003774 F cytoskeletal motor activity
GO:0003779 F actin binding
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0007605 P sensory perception of sound
GO:0008152 P metabolic process
GO:0008407 P chaeta morphogenesis
GO:0016459 C myosin complex
GO:0030048 P actin filament-based movement
GO:0030898 F microfilament motor activity
GO:0032027 F myosin light chain binding
GO:0035317 P imaginal disc-derived wing hair organization
GO:0048800 P antennal morphogenesis
1946 O_BomoSK11752_complete:A_BomoSK_comp12722_c0_seq1
218bp
 PREDICTED:_uncharacterized_protein_LOC106138409_[Amyelois_transitella]
1947 O_BomoSK11753_complete:A_BomoSK_comp12722_c0_seq2
223bp
 PREDICTED:_uncharacterized_protein_LOC106138409_[Amyelois_transitella]
1948 O_BomoSK11754_complete:A_BomoSK_comp12723_c0_seq1
170bp
 protein_star_[Bombyx_mori]
GO:0000042 P protein localization to Golgi apparatus
GO:0000139 C Golgi membrane
GO:0001751 P compound eye photoreceptor cell differentiation
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0005794 C Golgi apparatus
GO:0005886 C plasma membrane
GO:0007173 P epidermal growth factor receptor signaling pathway
GO:0007275 P multicellular organism development
GO:0007421 P stomatogastric nervous system development
GO:0007476 P imaginal disc-derived wing morphogenesis
GO:0007601 P visual perception
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016318 P ommatidial rotation
GO:0035225 P determination of genital disc primordium
GO:0038004 P epidermal growth factor receptor ligand maturation
GO:0042051 P compound eye photoreceptor development
GO:0042058 P regulation of epidermal growth factor receptor signaling pathway
GO:0045467 P R7 cell development
GO:0046667 P compound eye retinal cell programmed cell death
GO:0046845 P branched duct epithelial cell fate determination, open tracheal system
GO:0048149 P behavioral response to ethanol
GO:0048477 P oogenesis
GO:0048865 P stem cell fate commitment
GO:0050896 P response to stimulus
GO:0061331 P epithelial cell proliferation involved in Malpighian tubule morphogenesis
GO:0097038 C perinuclear endoplasmic reticulum
1949 O_BomoSK11755_complete:A_BomoSK_comp12723_c0_seq2
315bp
 protein_star_[Bombyx_mori]
GO:0000042 P protein localization to Golgi apparatus
GO:0000139 C Golgi membrane
GO:0001751 P compound eye photoreceptor cell differentiation
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0005794 C Golgi apparatus
GO:0005886 C plasma membrane
GO:0007173 P epidermal growth factor receptor signaling pathway
GO:0007275 P multicellular organism development
GO:0007421 P stomatogastric nervous system development
GO:0007476 P imaginal disc-derived wing morphogenesis
GO:0007601 P visual perception
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016318 P ommatidial rotation
GO:0035225 P determination of genital disc primordium
GO:0038004 P epidermal growth factor receptor ligand maturation
GO:0042051 P compound eye photoreceptor development
GO:0042058 P regulation of epidermal growth factor receptor signaling pathway
GO:0045467 P R7 cell development
GO:0046667 P compound eye retinal cell programmed cell death
GO:0046845 P branched duct epithelial cell fate determination, open tracheal system
GO:0048149 P behavioral response to ethanol
GO:0048477 P oogenesis
GO:0048865 P stem cell fate commitment
GO:0050896 P response to stimulus
GO:0061331 P epithelial cell proliferation involved in Malpighian tubule morphogenesis
GO:0097038 C perinuclear endoplasmic reticulum
1950 O_BomoSK11756_complete:A_BomoSK_comp12723_c0_seq2
107bp
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