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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
1441 O_BomoSK11298_complete:A_BomoSK_comp12568_c0_seq2
144bp
 hypothetical_protein_CWATWH0003_0813_[Crocosphaera_watsonii_WH_0003]
1442 O_BomoSK11299_complete:A_BomoSK_comp12568_c0_seq2
107bp
 PREDICTED:_myomesin-1_isoform_X2_[Equus_caballus]
1443 O_BomoSK1129_complete:A_BomoSK_comp3901_c0_seq1
530bp
 PREDICTED:_uncharacterized_protein_LOC106136134_[Amyelois_transitella]
1444 O_BomoSK112_3prime_partial:A_BomoSK_comp404_c0_seq1
348bp
 PREDICTED:_actin-binding_protein_anillin-like_[Bombyx_mori]
GO:0000281 P mitotic cytokinesis
GO:0000910 P cytokinesis
GO:0000915 P actomyosin contractile ring assembly
GO:0003779 F actin binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005826 C actomyosin contractile ring
GO:0005856 C cytoskeleton
GO:0005938 C cell cortex
GO:0007009 P plasma membrane organization
GO:0007049 P cell cycle
GO:0007067 P mitotic cell cycle
GO:0007112 P male meiosis cytokinesis
GO:0007275 P multicellular organism development
GO:0007279 P pole cell formation
GO:0007283 P spermatogenesis
GO:0007349 P cellularization
GO:0007423 P sensory organ development
GO:0008017 F microtubule binding
GO:0008104 P protein localization
GO:0008356 P asymmetric cell division
GO:0017022 F myosin binding
GO:0022008 P neurogenesis
GO:0030154 P cell differentiation
GO:0030726 P male germline ring canal formation
GO:0031106 P septin ring organization
GO:0032154 C cleavage furrow
GO:0032189 P maintenance of actomyosin contractile ring localization
GO:0032465 P regulation of cytokinesis
GO:0035323 C male germline ring canal
GO:0043063 P intercellular bridge organization
GO:0045035 P sensory organ precursor cell division
GO:0045172 C germline ring canal
GO:0048477 P oogenesis
GO:0051015 F actin filament binding
GO:0051297 P centrosome cycle
GO:0051301 P cell division
GO:0051321 P meiotic cell cycle
GO:0051533 P positive regulation of calcineurin-NFAT signaling cascade
GO:0070938 C contractile ring
1445 O_BomoSK11300_complete:A_BomoSK_comp12568_c0_seq2
106bp
 Uncharacterised_protein_[Mycobacterium_abscessus]
1446 O_BomoSK11301_complete:A_BomoSK_comp12568_c0_seq2
100bp
 PREDICTED:_proton-coupled_folate_transporter_[Chrysemys_picta_bellii]
1447 O_BomoSK11302_3prime_partial:A_BomoSK_comp12568_c0_seq3
127bp
 MLE_protein_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000228 C nuclear chromosome
GO:0000785 C chromatin
GO:0000805 C X chromosome
GO:0003676 F nucleic acid binding
GO:0003682 F chromatin binding
GO:0003723 F RNA binding
GO:0003724 F RNA helicase activity
GO:0003725 F double-stranded RNA binding
GO:0004004 F RNA helicase activity
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005665 C RNA polymerase II, core complex
GO:0005694 C chromosome
GO:0005700 C polytene chromosome
GO:0005737 C cytoplasm
GO:0006396 P RNA processing
GO:0007549 P dosage compensation
GO:0008026 F helicase activity
GO:0008340 P determination of adult lifespan
GO:0009047 P dosage compensation by hyperactivation of X chromosome
GO:0016456 C X chromosome located dosage compensation complex, transcription activating
GO:0016457 P dosage compensation complex assembly involved in dosage compensation by hyperactivation of X chromosome
GO:0016787 F hydrolase activity
GO:0031453 P positive regulation of heterochromatin assembly
GO:0044822 F RNA binding
GO:0045433 P male courtship behavior, veined wing generated song production
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0048675 P axon extension
GO:0072487 C MSL complex
1448 O_BomoSK11303_5prime_partial:A_BomoSK_comp12568_c0_seq4
1195bp
 MLE_protein_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000228 C nuclear chromosome
GO:0000785 C chromatin
GO:0000805 C X chromosome
GO:0003676 F nucleic acid binding
GO:0003682 F chromatin binding
GO:0003723 F RNA binding
GO:0003724 F RNA helicase activity
GO:0003725 F double-stranded RNA binding
GO:0004004 F RNA helicase activity
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005665 C RNA polymerase II, core complex
GO:0005694 C chromosome
GO:0005700 C polytene chromosome
GO:0005737 C cytoplasm
GO:0006396 P RNA processing
GO:0007549 P dosage compensation
GO:0008026 F helicase activity
GO:0008340 P determination of adult lifespan
GO:0009047 P dosage compensation by hyperactivation of X chromosome
GO:0016456 C X chromosome located dosage compensation complex, transcription activating
GO:0016457 P dosage compensation complex assembly involved in dosage compensation by hyperactivation of X chromosome
GO:0016787 F hydrolase activity
GO:0031453 P positive regulation of heterochromatin assembly
GO:0044822 F RNA binding
GO:0045433 P male courtship behavior, veined wing generated song production
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0048675 P axon extension
GO:0072487 C MSL complex
1449 O_BomoSK11304_complete:A_BomoSK_comp12568_c0_seq4
148bp
 zinc_ABC_transporter_ATP-binding_protein_[Lactococcus_lactis]
1450 O_BomoSK11305_complete:A_BomoSK_comp12568_c0_seq4
144bp
 hypothetical_protein_CWATWH0003_0813_[Crocosphaera_watsonii_WH_0003]
1451 O_BomoSK11306_complete:A_BomoSK_comp12568_c0_seq4
119bp
 Adhesive_plaque_matrix_protein_[Myotis_brandtii]
1452 O_BomoSK11307_complete:A_BomoSK_comp12568_c0_seq4
106bp
 Uncharacterised_protein_[Mycobacterium_abscessus]
1453 O_BomoSK11308_complete:A_BomoSK_comp12568_c0_seq4
100bp
 PREDICTED:_proton-coupled_folate_transporter_[Chrysemys_picta_bellii]
1454 O_BomoSK11309_5prime_partial:A_BomoSK_comp12568_c0_seq5
1189bp
 MLE_protein_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000228 C nuclear chromosome
GO:0000785 C chromatin
GO:0000805 C X chromosome
GO:0003676 F nucleic acid binding
GO:0003682 F chromatin binding
GO:0003723 F RNA binding
GO:0003724 F RNA helicase activity
GO:0003725 F double-stranded RNA binding
GO:0004004 F RNA helicase activity
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005665 C RNA polymerase II, core complex
GO:0005694 C chromosome
GO:0005700 C polytene chromosome
GO:0005737 C cytoplasm
GO:0006396 P RNA processing
GO:0007549 P dosage compensation
GO:0008026 F helicase activity
GO:0008340 P determination of adult lifespan
GO:0009047 P dosage compensation by hyperactivation of X chromosome
GO:0016456 C X chromosome located dosage compensation complex, transcription activating
GO:0016457 P dosage compensation complex assembly involved in dosage compensation by hyperactivation of X chromosome
GO:0016787 F hydrolase activity
GO:0031453 P positive regulation of heterochromatin assembly
GO:0044822 F RNA binding
GO:0045433 P male courtship behavior, veined wing generated song production
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0048675 P axon extension
GO:0072487 C MSL complex
1455 O_BomoSK1130_3prime_partial:A_BomoSK_comp3902_c0_seq1
470bp
 PREDICTED:_U2_snRNP-associated_SURP_motif-containing_protein_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0006396 P RNA processing
1456 O_BomoSK11310_complete:A_BomoSK_comp12568_c0_seq5
148bp
 zinc_ABC_transporter_ATP-binding_protein_[Lactococcus_lactis]
1457 O_BomoSK11311_complete:A_BomoSK_comp12568_c0_seq5
144bp
 hypothetical_protein_CWATWH0003_0813_[Crocosphaera_watsonii_WH_0003]
1458 O_BomoSK11312_complete:A_BomoSK_comp12568_c0_seq5
113bp
 hypothetical_protein_FF36_04279_[Frankia_sp._CpI1-S]
1459 O_BomoSK11313_complete:A_BomoSK_comp12568_c0_seq5
106bp
 Uncharacterised_protein_[Mycobacterium_abscessus]
1460 O_BomoSK11314_complete:A_BomoSK_comp12568_c0_seq5
100bp
 PREDICTED:_proton-coupled_folate_transporter_[Chrysemys_picta_bellii]
1461 O_BomoSK11315_complete:A_BomoSK_comp12568_c0_seq6
1052bp
 MLE_protein_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000228 C nuclear chromosome
GO:0000785 C chromatin
GO:0000805 C X chromosome
GO:0003676 F nucleic acid binding
GO:0003682 F chromatin binding
GO:0003723 F RNA binding
GO:0003724 F RNA helicase activity
GO:0003725 F double-stranded RNA binding
GO:0004004 F RNA helicase activity
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005665 C RNA polymerase II, core complex
GO:0005694 C chromosome
GO:0005700 C polytene chromosome
GO:0005737 C cytoplasm
GO:0006396 P RNA processing
GO:0007549 P dosage compensation
GO:0008026 F helicase activity
GO:0008340 P determination of adult lifespan
GO:0009047 P dosage compensation by hyperactivation of X chromosome
GO:0016456 C X chromosome located dosage compensation complex, transcription activating
GO:0016457 P dosage compensation complex assembly involved in dosage compensation by hyperactivation of X chromosome
GO:0016787 F hydrolase activity
GO:0031453 P positive regulation of heterochromatin assembly
GO:0044822 F RNA binding
GO:0045433 P male courtship behavior, veined wing generated song production
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0048675 P axon extension
GO:0072487 C MSL complex
1462 O_BomoSK11316_complete:A_BomoSK_comp12568_c0_seq6
148bp
 zinc_ABC_transporter_ATP-binding_protein_[Lactococcus_lactis]
1463 O_BomoSK11317_complete:A_BomoSK_comp12568_c0_seq6
144bp
 hypothetical_protein_CWATWH0003_0813_[Crocosphaera_watsonii_WH_0003]
1464 O_BomoSK11318_complete:A_BomoSK_comp12568_c0_seq6
113bp
 hypothetical_protein_FF36_04279_[Frankia_sp._CpI1-S]
1465 O_BomoSK11319_complete:A_BomoSK_comp12568_c0_seq6
106bp
 Uncharacterised_protein_[Mycobacterium_abscessus]
1466 O_BomoSK1131_complete:A_BomoSK_comp3905_c0_seq1
299bp
 thymidylate_synthase_isoform_1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003729 F mRNA binding
GO:0004799 F thymidylate synthase activity
GO:0005542 F folic acid binding
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0005759 C mitochondrial matrix
GO:0006206 P pyrimidine nucleobase metabolic process
GO:0006231 P dTMP biosynthetic process
GO:0006235 P dTTP biosynthetic process
GO:0007568 P aging
GO:0007623 P circadian rhythm
GO:0008144 F obsolete drug binding
GO:0008168 F methyltransferase activity
GO:0009165 P nucleotide biosynthetic process
GO:0009636 P response to toxic substance
GO:0014070 P response to organic cyclic compound
GO:0016020 C membrane
GO:0016740 F transferase activity
GO:0019088 P transformation of host cell by virus
GO:0019860 P uracil metabolic process
GO:0031100 P animal organ regeneration
GO:0032259 P methylation
GO:0032570 P response to progesterone
GO:0033189 P response to vitamin A
GO:0034097 P response to cytokine
GO:0035999 P tetrahydrofolate interconversion
GO:0042493 P response to xenobiotic stimulus
GO:0042803 F protein homodimerization activity
GO:0045471 P response to ethanol
GO:0046078 P dUMP metabolic process
GO:0046653 P tetrahydrofolate metabolic process
GO:0046683 P response to organophosphorus
GO:0048037 F obsolete cofactor binding
GO:0048589 P developmental growth
GO:0051216 P cartilage development
GO:0051384 P response to glucocorticoid
GO:0051593 P response to folic acid
GO:0060574 P intestinal epithelial cell maturation
1467 O_BomoSK11320_complete:A_BomoSK_comp12568_c0_seq6
100bp
 PREDICTED:_proton-coupled_folate_transporter_[Chrysemys_picta_bellii]
1468 O_BomoSK11321_complete:A_BomoSK_comp12568_c0_seq7
1058bp
 MLE_protein_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000228 C nuclear chromosome
GO:0000785 C chromatin
GO:0000805 C X chromosome
GO:0003676 F nucleic acid binding
GO:0003682 F chromatin binding
GO:0003723 F RNA binding
GO:0003724 F RNA helicase activity
GO:0003725 F double-stranded RNA binding
GO:0004004 F RNA helicase activity
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005665 C RNA polymerase II, core complex
GO:0005694 C chromosome
GO:0005700 C polytene chromosome
GO:0005737 C cytoplasm
GO:0006396 P RNA processing
GO:0007549 P dosage compensation
GO:0008026 F helicase activity
GO:0008340 P determination of adult lifespan
GO:0009047 P dosage compensation by hyperactivation of X chromosome
GO:0016456 C X chromosome located dosage compensation complex, transcription activating
GO:0016457 P dosage compensation complex assembly involved in dosage compensation by hyperactivation of X chromosome
GO:0016787 F hydrolase activity
GO:0031453 P positive regulation of heterochromatin assembly
GO:0044822 F RNA binding
GO:0045433 P male courtship behavior, veined wing generated song production
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0048675 P axon extension
GO:0072487 C MSL complex
1469 O_BomoSK11322_complete:A_BomoSK_comp12568_c0_seq7
148bp
 zinc_ABC_transporter_ATP-binding_protein_[Lactococcus_lactis]
1470 O_BomoSK11323_complete:A_BomoSK_comp12568_c0_seq7
144bp
 hypothetical_protein_CWATWH0003_0813_[Crocosphaera_watsonii_WH_0003]
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