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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
1231 O_BomoSK11108_complete:A_BomoSK_comp12531_c0_seq1
284bp
 PREDICTED:_LOW_QUALITY_PROTEIN:_AP-2_complex_subunit_alpha_[Papilio_polytes]
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0005905 C clathrin-coated pit
GO:0006810 P transport
GO:0006886 P intracellular protein transport
GO:0006897 P endocytosis
GO:0006901 P vesicle coating
GO:0007269 P neurotransmitter secretion
GO:0008021 C synaptic vesicle
GO:0008104 P protein localization
GO:0008356 P asymmetric cell division
GO:0008565 F obsolete protein transporter activity
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016183 P synaptic vesicle coating
GO:0016192 P vesicle-mediated transport
GO:0019233 P sensory perception of pain
GO:0022008 P neurogenesis
GO:0030100 P regulation of endocytosis
GO:0030117 C membrane coat
GO:0030122 C AP-2 adaptor complex
GO:0030131 C clathrin adaptor complex
GO:0030135 C coated vesicle
GO:0030707 P ovarian follicle cell development
GO:0045807 P positive regulation of endocytosis
GO:0048488 P synaptic vesicle endocytosis
GO:0048489 P synaptic vesicle transport
1232 O_BomoSK11109_complete:A_BomoSK_comp12531_c0_seq1
139bp
 T9SS_C-terminal_target_domain-containing_protein_[Chryseobacterium_sp._ERMR1:04]
1233 O_BomoSK1110_complete:A_BomoSK_comp3887_c0_seq3
113bp
 PREDICTED:_probable_protein_phosphatase_2C_35_[Musa_acuminata_subsp._malaccensis]
1234 O_BomoSK11110_complete:A_BomoSK_comp12531_c0_seq1
103bp
 Alpha-ketoglutarate-dependent_2,4-dichlorophenoxyacetate_dioxygenase_[Talaromyces_marneffei_PM1]
1235 O_BomoSK11111_3prime_partial:A_BomoSK_comp12532_c0_seq1
264bp
 PREDICTED:_macrophage_erythroblast_attacher_isoform_X2_[Bombyx_mori]
GO:0003779 F actin binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0007049 P cell cycle
GO:0016020 C membrane
GO:0016363 C nuclear matrix
GO:0043249 P erythrocyte maturation
GO:0051301 P cell division
1236 O_BomoSK11112_5prime_partial:A_BomoSK_comp12532_c0_seq1
144bp
 MULTISPECIES:_1,4-alpha-glucan_branching_enzyme_[Pseudomonas]
1237 O_BomoSK11113_complete:A_BomoSK_comp12534_c0_seq1
1043bp
 PREDICTED:_serine/threonine-protein_kinase_N_[Papilio_polytes]
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0004697 F protein kinase C activity
GO:0005524 F ATP binding
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006468 P protein phosphorylation
GO:0007049 P cell cycle
GO:0007155 P cell adhesion
GO:0007165 P signal transduction
GO:0016020 C membrane
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0018105 P peptidyl-serine phosphorylation
GO:0030027 C lamellipodium
GO:0030054 C cell junction
GO:0030496 C midbody
GO:0032154 C cleavage furrow
GO:0035556 P intracellular signal transduction
GO:0042995 C cell projection
GO:0051301 P cell division
1238 O_BomoSK11114_complete:A_BomoSK_comp12534_c0_seq1
168bp
 hypothetical_protein_[Sulfuricurvum_kujiense]
1239 O_BomoSK11115_3prime_partial:A_BomoSK_comp12535_c0_seq1
148bp
 PREDICTED:_recQ-mediated_genome_instability_protein_1_[Plutella_xylostella]
GO:0000166 F nucleotide binding
GO:0005634 C nucleus
GO:0006260 P DNA replication
1240 O_BomoSK11116_5prime_partial:A_BomoSK_comp12535_c0_seq1
115bp
 serine/threonine_protein_kinase_[Alteromonas_macleodii]
1241 O_BomoSK11117_complete:A_BomoSK_comp12535_c0_seq2
141bp
 PREDICTED:_recQ-mediated_genome_instability_protein_1_[Plutella_xylostella]
GO:0000166 F nucleotide binding
GO:0005634 C nucleus
GO:0006260 P DNA replication
1242 O_BomoSK11118_complete:A_BomoSK_comp12535_c0_seq2
136bp
 hypothetical_protein_SF06_32610_[Serpens_flexibilis]
1243 O_BomoSK11119_3prime_partial:A_BomoSK_comp12535_c0_seq3
392bp
 PREDICTED:_recQ-mediated_genome_instability_protein_1-like_[Amyelois_transitella]
GO:0000166 F nucleotide binding
GO:0005634 C nucleus
GO:0006260 P DNA replication
1244 O_BomoSK1111_complete:A_BomoSK_comp3888_c0_seq1
489bp
 PREDICTED:_inositol-trisphosphate_3-kinase_A_isoform_X2_[Papilio_xuthus]
GO:0000165 P MAPK cascade
GO:0000166 F nucleotide binding
GO:0001932 P regulation of protein phosphorylation
GO:0002262 P myeloid cell homeostasis
GO:0005515 F protein binding
GO:0005516 F calmodulin binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005829 C cytosol
GO:0007165 P signal transduction
GO:0007166 P cell surface receptor signaling pathway
GO:0008440 F inositol-1,4,5-trisphosphate 3-kinase activity
GO:0016020 C membrane
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0030217 P T cell differentiation
GO:0032957 P inositol trisphosphate metabolic process
GO:0033030 P negative regulation of neutrophil apoptotic process
GO:0035726 P common myeloid progenitor cell proliferation
GO:0043647 P inositol phosphate metabolic process
GO:0045059 P positive thymic T cell selection
GO:0045061 P thymic T cell selection
GO:0045638 P negative regulation of myeloid cell differentiation
GO:0046579 P positive regulation of Ras protein signal transduction
GO:0046638 P positive regulation of alpha-beta T cell differentiation
GO:0071277 P cellular response to calcium ion
1245 O_BomoSK11120_5prime_partial:A_BomoSK_comp12535_c0_seq3
115bp
 serine/threonine_protein_kinase_[Alteromonas_macleodii]
1246 O_BomoSK11121_complete:A_BomoSK_comp12535_c0_seq4
385bp
 PREDICTED:_recQ-mediated_genome_instability_protein_1-like_[Amyelois_transitella]
GO:0000166 F nucleotide binding
GO:0005634 C nucleus
GO:0006260 P DNA replication
1247 O_BomoSK11122_complete:A_BomoSK_comp12535_c0_seq4
136bp
 hypothetical_protein_SF06_32610_[Serpens_flexibilis]
1248 O_BomoSK11123_5prime_partial:A_BomoSK_comp12536_c0_seq1
117bp
 alkaline_phosphatase_[Burkholderia_seminalis]
1249 O_BomoSK11124_complete:A_BomoSK_comp12538_c0_seq1
146bp
 PREDICTED:_protein_SON_isoform_X1_[Bombyx_mori]
GO:0000226 P microtubule cytoskeleton organization
GO:0000910 P cytokinesis
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006397 P mRNA processing
GO:0007049 P cell cycle
GO:0008380 P RNA splicing
GO:0016607 C nuclear speck
GO:0043066 P negative regulation of apoptotic process
GO:0043484 P regulation of RNA splicing
GO:0044822 F RNA binding
GO:0050733 F RS domain binding
GO:0051726 P regulation of cell cycle
1250 O_BomoSK11125_complete:A_BomoSK_comp12538_c0_seq2
839bp
 PREDICTED:_protein_SON_isoform_X1_[Bombyx_mori]
GO:0000226 P microtubule cytoskeleton organization
GO:0000910 P cytokinesis
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006397 P mRNA processing
GO:0007049 P cell cycle
GO:0008380 P RNA splicing
GO:0016607 C nuclear speck
GO:0043066 P negative regulation of apoptotic process
GO:0043484 P regulation of RNA splicing
GO:0044822 F RNA binding
GO:0050733 F RS domain binding
GO:0051726 P regulation of cell cycle
1251 O_BomoSK11126_3prime_partial:A_BomoSK_comp12538_c0_seq2
172bp
1252 O_BomoSK11127_complete:A_BomoSK_comp12538_c0_seq2
101bp
 Cysteine-rich_[Glarea_lozoyensis_ATCC_20868]
1253 O_BomoSK11128_complete:A_BomoSK_comp12539_c0_seq1
571bp
 aly_protein_[Bombyx_mori]
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0006351 P transcription, DNA-templated
GO:0007049 P cell cycle
GO:0017053 C transcription repressor complex
GO:0071897 P DNA biosynthetic process
1254 O_BomoSK11129_complete:A_BomoSK_comp12540_c0_seq1
218bp
 krotzkopf_verkehrt_[Papilio_polytes]
1255 O_BomoSK1112_complete:A_BomoSK_comp3888_c0_seq1
145bp
1256 O_BomoSK11130_complete:A_BomoSK_comp12540_c0_seq1
186bp
 COP9_[Helicoverpa_zea]
GO:0003674 F molecular_function
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0008150 P biological_process
GO:0008180 C COP9 signalosome
1257 O_BomoSK11131_complete:A_BomoSK_comp12540_c0_seq1
106bp
 PREDICTED:_chitin_synthase_A_isoform_X3_[Bombyx_mori]
1258 O_BomoSK11132_complete:A_BomoSK_comp12540_c0_seq2
289bp
 PREDICTED:_chitin_synthase_A_isoform_X1_[Bombyx_mori]
1259 O_BomoSK11133_complete:A_BomoSK_comp12540_c0_seq2
186bp
 COP9_[Helicoverpa_zea]
GO:0003674 F molecular_function
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0008150 P biological_process
GO:0008180 C COP9 signalosome
1260 O_BomoSK11134_complete:A_BomoSK_comp12540_c0_seq3
289bp
 PREDICTED:_chitin_synthase_A_isoform_X2_[Bombyx_mori]
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