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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
10831 O_BomoSK1974_complete:A_BomoSK_comp4803_c0_seq2
125bp
 PREDICTED:_transmembrane_protein_256_homolog_isoform_X2_[Bombyx_mori]
GO:0005886 C plasma membrane
GO:0016020 C membrane
GO:0016021 C integral component of membrane
10832 O_BomoSK19750_complete:A_BomoSK_comp14271_c0_seq1
322bp
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007601 P visual perception
GO:0046872 F metal ion binding
GO:0050896 P response to stimulus
10833 O_BomoSK19751_complete:A_BomoSK_comp14271_c0_seq2
596bp
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
10834 O_BomoSK19752_complete:A_BomoSK_comp14271_c0_seq2
102bp
10835 O_BomoSK19753_complete:A_BomoSK_comp14271_c0_seq3
727bp
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
10836 O_BomoSK19754_complete:A_BomoSK_comp14271_c0_seq3
123bp
10837 O_BomoSK19755_complete:A_BomoSK_comp14271_c0_seq4
548bp
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
10838 O_BomoSK19756_complete:A_BomoSK_comp14271_c0_seq5
364bp
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
10839 O_BomoSK19757_complete:A_BomoSK_comp14271_c0_seq6
653bp
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
10840 O_BomoSK19758_complete:A_BomoSK_comp14271_c0_seq6
102bp
10841 O_BomoSK19759_complete:A_BomoSK_comp14271_c0_seq7
642bp
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
10842 O_BomoSK1975_complete:A_BomoSK_comp4805_c0_seq1
422bp
 PREDICTED:_sorting_nexin-6_isoform_X3_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005768 C endosome
GO:0005769 C early endosome
GO:0005829 C cytosol
GO:0006810 P transport
GO:0006886 P intracellular protein transport
GO:0006897 P endocytosis
GO:0007175 P negative regulation of epidermal growth factor-activated receptor activity
GO:0008289 F lipid binding
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016023 C cytoplasmic vesicle
GO:0016050 P vesicle organization
GO:0016241 P regulation of macroautophagy
GO:0019898 C extrinsic component of membrane
GO:0030512 P negative regulation of transforming growth factor beta receptor signaling pathway
GO:0030904 C retromer complex
GO:0030905 C retromer, tubulation complex
GO:0031410 C cytoplasmic vesicle
GO:0031901 C early endosome membrane
GO:0034452 F dynactin binding
GO:0035091 F phosphatidylinositol binding
GO:0042147 P retrograde transport, endosome to Golgi
GO:0042803 F protein homodimerization activity
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0046982 F protein heterodimerization activity
GO:0097422 C tubular endosome
GO:1903593 P regulation of histamine secretion by mast cell
10843 O_BomoSK19760_complete:A_BomoSK_comp14271_c0_seq8
453bp
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
10844 O_BomoSK19761_complete:A_BomoSK_comp14271_c0_seq8
322bp
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007601 P visual perception
GO:0046872 F metal ion binding
GO:0050896 P response to stimulus
10845 O_BomoSK19762_complete:A_BomoSK_comp14271_c0_seq9
585bp
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
10846 O_BomoSK19763_complete:A_BomoSK_comp14271_c0_seq10
327bp
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
10847 O_BomoSK19764_complete:A_BomoSK_comp14271_c0_seq11
690bp
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
10848 O_BomoSK19765_complete:A_BomoSK_comp14271_c0_seq11
123bp
10849 O_BomoSK19766_complete:A_BomoSK_comp14271_c0_seq12
511bp
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
10850 O_BomoSK19767_complete:A_BomoSK_comp14271_c0_seq13
568bp
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
10851 O_BomoSK19768_complete:A_BomoSK_comp14271_c0_seq14
396bp
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
10852 O_BomoSK19769_complete:A_BomoSK_comp14271_c0_seq14
285bp
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
10853 O_BomoSK1976_5prime_partial:A_BomoSK_comp4812_c0_seq1
519bp
 PREDICTED:_protein_ERGIC-53_[Bombyx_mori]
GO:0000139 C Golgi membrane
GO:0005537 F mannose binding
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0005793 C endoplasmic reticulum-Golgi intermediate compartment
GO:0005794 C Golgi apparatus
GO:0006810 P transport
GO:0006888 P endoplasmic reticulum to Golgi vesicle-mediated transport
GO:0007029 P endoplasmic reticulum organization
GO:0007030 P Golgi organization
GO:0010638 P positive regulation of organelle organization
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016192 P vesicle-mediated transport
GO:0030017 C sarcomere
GO:0030134 C COPII-coated ER to Golgi transport vesicle
GO:0030246 F carbohydrate binding
GO:0033116 C endoplasmic reticulum-Golgi intermediate compartment membrane
GO:0044220 C host cell perinuclear region of cytoplasm
GO:0046872 F metal ion binding
GO:0070062 C extracellular exosome
10854 O_BomoSK19770_complete:A_BomoSK_comp14271_c0_seq15
605bp
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
10855 O_BomoSK19771_complete:A_BomoSK_comp14271_c0_seq16
633bp
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
10856 O_BomoSK19772_complete:A_BomoSK_comp14271_c0_seq16
123bp
10857 O_BomoSK19773_complete:A_BomoSK_comp14271_c0_seq17
670bp
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
10858 O_BomoSK19774_complete:A_BomoSK_comp14271_c0_seq17
123bp
10859 O_BomoSK19775_complete:A_BomoSK_comp14271_c0_seq19
453bp
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
10860 O_BomoSK19776_complete:A_BomoSK_comp14271_c0_seq19
285bp
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
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