SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

previous next from show/51699
No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
481 O_BomoN4EE10433_5prime_partial:A_BomoN4EE_TR28426_c0_g1_i5
1074bp
 cadherin-like_membrane_protein_precursor_[Bombyx_mori]
GO:0005509 F calcium ion binding
GO:0005886 C plasma membrane
GO:0007155 P cell adhesion
GO:0007156 P homophilic cell adhesion via plasma membrane adhesion molecules
GO:0007605 P sensory perception of sound
GO:0007626 P locomotory behavior
GO:0008150 P biological_process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0032420 C stereocilium
GO:0045177 C apical part of cell
GO:0046872 F metal ion binding
GO:0047485 F protein N-terminus binding
GO:0060122 P inner ear receptor cell stereocilium organization
482 O_BomoN4EE10434_complete:A_BomoN4EE_TR28426_c0_g1_i5
213bp
483 O_BomoN4EE10435_complete:A_BomoN4EE_TR28426_c0_g1_i5
116bp
484 O_BomoN4EE10436_complete:A_BomoN4EE_TR28426_c0_g1_i5
111bp
485 O_BomoN4EE10437_complete:A_BomoN4EE_TR28426_c0_g1_i6
996bp
 cadherin-like_membrane_protein_precursor_[Bombyx_mori]
GO:0005509 F calcium ion binding
GO:0005886 C plasma membrane
GO:0007155 P cell adhesion
GO:0007156 P homophilic cell adhesion via plasma membrane adhesion molecules
GO:0007605 P sensory perception of sound
GO:0007626 P locomotory behavior
GO:0008150 P biological_process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0032420 C stereocilium
GO:0045177 C apical part of cell
GO:0046872 F metal ion binding
GO:0047485 F protein N-terminus binding
GO:0060122 P inner ear receptor cell stereocilium organization
486 O_BomoN4EE10438_complete:A_BomoN4EE_TR28426_c0_g1_i6
663bp
 cadherin-like_membrane_protein_[Bombyx_mori]
GO:0005509 F calcium ion binding
GO:0005886 C plasma membrane
GO:0007155 P cell adhesion
GO:0007156 P homophilic cell adhesion via plasma membrane adhesion molecules
GO:0016020 C membrane
GO:0016021 C integral component of membrane
487 O_BomoN4EE10439_complete:A_BomoN4EE_TR28426_c0_g1_i6
213bp
488 O_BomoN4EE1043_complete:A_BomoN4EE_TR14189_c0_g1_i1
106bp
489 O_BomoN4EE10440_complete:A_BomoN4EE_TR28426_c0_g1_i6
116bp
490 O_BomoN4EE10441_complete:A_BomoN4EE_TR28426_c0_g1_i6
111bp
491 O_BomoN4EE10442_complete:A_BomoN4EE_TR28426_c0_g1_i7
324bp
 cadherin-like_membrane_protein_[Bombyx_mori]
GO:0001917 C photoreceptor inner segment
GO:0005509 F calcium ion binding
GO:0005515 F protein binding
GO:0005813 C centrosome
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0006816 P calcium ion transport
GO:0007155 P cell adhesion
GO:0007156 P homophilic cell adhesion via plasma membrane adhesion molecules
GO:0007605 P sensory perception of sound
GO:0007626 P locomotory behavior
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016339 P calcium-dependent cell-cell adhesion via plasma membrane cell adhesion molecules
GO:0032420 C stereocilium
GO:0032426 C stereocilium tip
GO:0042472 P inner ear morphogenesis
GO:0042491 P inner ear auditory receptor cell differentiation
GO:0045202 C synapse
GO:0045494 P photoreceptor cell maintenance
GO:0046872 F metal ion binding
GO:0048563 P post-embryonic animal organ morphogenesis
GO:0048839 P inner ear development
GO:0050953 P sensory perception of light stimulus
GO:0050957 P equilibrioception
GO:0051480 P regulation of cytosolic calcium ion concentration
GO:0060088 P auditory receptor cell stereocilium organization
GO:0060091 C kinocilium
GO:0060122 P inner ear receptor cell stereocilium organization
492 O_BomoN4EE10443_complete:A_BomoN4EE_TR28426_c0_g1_i7
213bp
493 O_BomoN4EE10444_5prime_partial:A_BomoN4EE_TR28427_c0_g1_i1
389bp
 PREDICTED:_ATP-binding_cassette_sub-family_G_member_1-like_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0005524 F ATP binding
GO:0005548 F phospholipid transporter activity
GO:0005654 C nucleoplasm
GO:0005739 C mitochondrion
GO:0005768 C endosome
GO:0005794 C Golgi apparatus
GO:0005886 C plasma membrane
GO:0006355 P regulation of transcription, DNA-templated
GO:0006810 P transport
GO:0006869 P lipid transport
GO:0008203 P cholesterol metabolic process
GO:0009897 C external side of plasma membrane
GO:0010033 P response to organic substance
GO:0010745 P negative regulation of macrophage derived foam cell differentiation
GO:0010872 P regulation of cholesterol esterification
GO:0010875 P positive regulation of cholesterol efflux
GO:0010888 P negative regulation of lipid storage
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016887 F ATP hydrolysis activity
GO:0017127 F cholesterol transfer activity
GO:0019534 F toxin transmembrane transporter activity
GO:0030301 P cholesterol transport
GO:0032367 P intracellular cholesterol transport
GO:0033344 P cholesterol efflux
GO:0033700 P phospholipid efflux
GO:0033993 P response to lipid
GO:0034041 F ABC-type sterol transporter activity
GO:0034374 P low-density lipoprotein particle remodeling
GO:0034375 P high-density lipoprotein particle remodeling
GO:0034436 P glycoprotein transport
GO:0034437 F obsolete glycoprotein transmembrane transporter activity
GO:0042632 P cholesterol homeostasis
GO:0042803 F protein homodimerization activity
GO:0042987 P amyloid precursor protein catabolic process
GO:0043231 C intracellular membrane-bounded organelle
GO:0043531 F ADP binding
GO:0043691 P reverse cholesterol transport
GO:0045542 P positive regulation of cholesterol biosynthetic process
GO:0046982 F protein heterodimerization activity
GO:0055037 C recycling endosome
GO:0055091 P phospholipid homeostasis
GO:0055099 P cellular response to high density lipoprotein particle stimulus
GO:1901998 P toxin transport
494 O_BomoN4EE10445_complete:A_BomoN4EE_TR28427_c0_g1_i1
110bp
495 O_BomoN4EE10446_5prime_partial:A_BomoN4EE_TR28427_c0_g1_i2
695bp
 PREDICTED:_ATP-binding_cassette_sub-family_G_member_1-like_[Papilio_machaon]
GO:0000166 F nucleotide binding
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016887 F ATP hydrolysis activity
GO:0017127 F cholesterol transfer activity
GO:0033344 P cholesterol efflux
GO:0034041 F ABC-type sterol transporter activity
GO:0042803 F protein homodimerization activity
GO:0046982 F protein heterodimerization activity
GO:0055085 P transmembrane transport
496 O_BomoN4EE10447_complete:A_BomoN4EE_TR28427_c0_g1_i2
110bp
497 O_BomoN4EE10448_internal:A_BomoN4EE_TR28427_c0_g2_i1
243bp
 PREDICTED:_ATP-binding_cassette_sub-family_G_member_1-like_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0005524 F ATP binding
GO:0005548 F phospholipid transporter activity
GO:0005654 C nucleoplasm
GO:0005739 C mitochondrion
GO:0005768 C endosome
GO:0005794 C Golgi apparatus
GO:0005886 C plasma membrane
GO:0006355 P regulation of transcription, DNA-templated
GO:0006810 P transport
GO:0006869 P lipid transport
GO:0008203 P cholesterol metabolic process
GO:0009897 C external side of plasma membrane
GO:0010033 P response to organic substance
GO:0010745 P negative regulation of macrophage derived foam cell differentiation
GO:0010872 P regulation of cholesterol esterification
GO:0010875 P positive regulation of cholesterol efflux
GO:0010888 P negative regulation of lipid storage
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016887 F ATP hydrolysis activity
GO:0017127 F cholesterol transfer activity
GO:0019534 F toxin transmembrane transporter activity
GO:0030301 P cholesterol transport
GO:0032367 P intracellular cholesterol transport
GO:0033344 P cholesterol efflux
GO:0033700 P phospholipid efflux
GO:0033993 P response to lipid
GO:0034041 F ABC-type sterol transporter activity
GO:0034374 P low-density lipoprotein particle remodeling
GO:0034375 P high-density lipoprotein particle remodeling
GO:0034436 P glycoprotein transport
GO:0034437 F obsolete glycoprotein transmembrane transporter activity
GO:0042632 P cholesterol homeostasis
GO:0042803 F protein homodimerization activity
GO:0042987 P amyloid precursor protein catabolic process
GO:0043231 C intracellular membrane-bounded organelle
GO:0043531 F ADP binding
GO:0043691 P reverse cholesterol transport
GO:0045542 P positive regulation of cholesterol biosynthetic process
GO:0046982 F protein heterodimerization activity
GO:0055037 C recycling endosome
GO:0055091 P phospholipid homeostasis
GO:0055099 P cellular response to high density lipoprotein particle stimulus
GO:1901998 P toxin transport
498 O_BomoN4EE10449_complete:A_BomoN4EE_TR28427_c0_g2_i1
110bp
499 O_BomoN4EE1044_internal:A_BomoN4EE_TR14230_c0_g1_i1
132bp
500 O_BomoN4EE10450_internal:A_BomoN4EE_TR28430_c4_g3_i1
179bp
 reverse_transcriptase_[Bombyx_mori]
501 O_BomoN4EE10451_5prime_partial:A_BomoN4EE_TR28430_c4_g3_i1
117bp
502 O_BomoN4EE10452_complete:A_BomoN4EE_TR28430_c4_g3_i1
113bp
503 O_BomoN4EE10453_complete:A_BomoN4EE_TR28431_c1_g1_i1
358bp
 PREDICTED:_acidic_fibroblast_growth_factor_intracellular-binding_protein_[Amyelois_transitella]
GO:0005634 C nucleus
GO:0012505 C endomembrane system
GO:0016020 C membrane
GO:0017134 F fibroblast growth factor binding
GO:0070062 C extracellular exosome
GO:0070527 P platelet aggregation
504 O_BomoN4EE10454_complete:A_BomoN4EE_TR28431_c1_g1_i3
274bp
 acidic_fibroblast_growth_factor_intracellular_binding_protein_[Danaus_plexippus]
GO:0005634 C nucleus
GO:0012505 C endomembrane system
GO:0016020 C membrane
GO:0017134 F fibroblast growth factor binding
GO:0070062 C extracellular exosome
GO:0070527 P platelet aggregation
505 O_BomoN4EE10455_complete:A_BomoN4EE_TR28431_c1_g1_i4
108bp
 PREDICTED:_acidic_fibroblast_growth_factor_intracellular-binding_protein_[Amyelois_transitella]
GO:0005634 C nucleus
GO:0012505 C endomembrane system
GO:0016020 C membrane
GO:0017134 F fibroblast growth factor binding
GO:0070062 C extracellular exosome
GO:0070527 P platelet aggregation
506 O_BomoN4EE10456_complete:A_BomoN4EE_TR28431_c1_g1_i5
209bp
 acidic_fibroblast_growth_factor_intracellular_binding_protein_[Danaus_plexippus]
GO:0005634 C nucleus
GO:0012505 C endomembrane system
GO:0016020 C membrane
GO:0017134 F fibroblast growth factor binding
GO:0070062 C extracellular exosome
GO:0070527 P platelet aggregation
507 O_BomoN4EE10457_complete:A_BomoN4EE_TR28431_c1_g1_i5
197bp
 unknown_[Dendroctonus_ponderosae]
508 O_BomoN4EE10458_complete:A_BomoN4EE_TR28432_c0_g1_i1
554bp
 PREDICTED:_pancreatic_triacylglycerol_lipase-like_[Amyelois_transitella]
GO:0004806 F triglyceride lipase activity
GO:0005576 C extracellular region
GO:0006629 P lipid metabolic process
GO:0016042 P lipid catabolic process
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
GO:0052689 F carboxylic ester hydrolase activity
509 O_BomoN4EE10459_complete:A_BomoN4EE_TR28432_c0_g1_i2
274bp
 PREDICTED:_pancreatic_triacylglycerol_lipase-like_[Amyelois_transitella]
GO:0004806 F triglyceride lipase activity
GO:0005576 C extracellular region
GO:0006629 P lipid metabolic process
GO:0016042 P lipid catabolic process
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
GO:0052689 F carboxylic ester hydrolase activity
510 O_BomoN4EE1045_internal:A_BomoN4EE_TR14230_c0_g1_i1
132bp
MULTISPECIES:_phage_tail_tape_measure_protein_[Actinobacteria]
previous next from show/51699

- SilkBase 1999-2023 -