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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
451 O_BomoN4EE10406_5prime_partial:A_BomoN4EE_TR28423_c2_g1_i2
425bp
 PREDICTED:_zinc_finger_protein_OZF-like_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
452 O_BomoN4EE10407_complete:A_BomoN4EE_TR28423_c2_g1_i2
301bp
453 O_BomoN4EE10408_complete:A_BomoN4EE_TR28423_c2_g1_i2
177bp
454 O_BomoN4EE10409_internal:A_BomoN4EE_TR28423_c2_g1_i3
273bp
 PREDICTED:_zinc_finger_protein_OZF-like_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007275 P multicellular organism development
GO:0007283 P spermatogenesis
GO:0030154 P cell differentiation
GO:0046872 F metal ion binding
455 O_BomoN4EE1040_internal:A_BomoN4EE_TR14107_c0_g1_i1
215bp
 PREDICTED:_RING_finger_protein_nhl-1-like_[Amyelois_transitella]
GO:0004842 F ubiquitin-protein transferase activity
GO:0005515 F protein binding
GO:0008270 F zinc ion binding
GO:0016567 P protein ubiquitination
GO:0046872 F metal ion binding
456 O_BomoN4EE10410_5prime_partial:A_BomoN4EE_TR28423_c3_g1_i1
259bp
 PREDICTED:_RNA_polymerase_II_elongation_factor_Ell_[Bombyx_mori]
GO:0001701 P in utero embryonic development
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006366 P transcription by RNA polymerase II
GO:0006368 P transcription elongation from RNA polymerase II promoter
GO:0008023 C transcription elongation factor complex
GO:0010923 P negative regulation of phosphatase activity
GO:0015030 C Cajal body
GO:0015629 C actin cytoskeleton
GO:0016607 C nuclear speck
GO:0019902 F phosphatase binding
GO:0032968 P positive regulation of transcription elongation from RNA polymerase II promoter
GO:0035327 C euchromatin
GO:0035363 C histone locus body
GO:0042795 P snRNA transcription by RNA polymerase II
GO:0042796 P snRNA transcription by RNA polymerase III
GO:0045945 P positive regulation of transcription by RNA polymerase III
457 O_BomoN4EE10411_5prime_partial:A_BomoN4EE_TR28423_c3_g1_i1
102bp
458 O_BomoN4EE10412_internal:A_BomoN4EE_TR28424_c1_g1_i1
381bp
 PREDICTED:_uncharacterized_protein_LOC101735858_[Bombyx_mori]
459 O_BomoN4EE10413_complete:A_BomoN4EE_TR28425_c0_g1_i1
152bp
 PREDICTED:_uncharacterized_protein_LOC106141368_[Amyelois_transitella]
460 O_BomoN4EE10414_5prime_partial:A_BomoN4EE_TR28425_c0_g1_i1
133bp
 PREDICTED:_uncharacterized_protein_LOC106141368_[Amyelois_transitella]
461 O_BomoN4EE10415_complete:A_BomoN4EE_TR28425_c0_g1_i1
102bp
 PREDICTED:_uncharacterized_protein_LOC106139403_[Amyelois_transitella]
462 O_BomoN4EE10416_complete:A_BomoN4EE_TR28425_c0_g1_i2
152bp
 PREDICTED:_uncharacterized_protein_LOC106141368_[Amyelois_transitella]
463 O_BomoN4EE10417_5prime_partial:A_BomoN4EE_TR28425_c0_g1_i2
133bp
 PREDICTED:_uncharacterized_protein_LOC106141368_[Amyelois_transitella]
464 O_BomoN4EE10418_complete:A_BomoN4EE_TR28425_c0_g1_i2
102bp
 PREDICTED:_uncharacterized_protein_LOC106139403_[Amyelois_transitella]
465 O_BomoN4EE10419_complete:A_BomoN4EE_TR28426_c0_g1_i1
1689bp
 cadherin-like_membrane_protein_precursor_[Bombyx_mori]
GO:0005509 F calcium ion binding
GO:0005886 C plasma membrane
GO:0007155 P cell adhesion
GO:0007156 P homophilic cell adhesion via plasma membrane adhesion molecules
GO:0007605 P sensory perception of sound
GO:0007626 P locomotory behavior
GO:0008150 P biological_process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0032420 C stereocilium
GO:0045177 C apical part of cell
GO:0046872 F metal ion binding
GO:0047485 F protein N-terminus binding
GO:0060122 P inner ear receptor cell stereocilium organization
466 O_BomoN4EE1041_5prime_partial:A_BomoN4EE_TR14142_c0_g1_i1
102bp
467 O_BomoN4EE10420_complete:A_BomoN4EE_TR28426_c0_g1_i1
213bp
468 O_BomoN4EE10421_complete:A_BomoN4EE_TR28426_c0_g1_i1
116bp
469 O_BomoN4EE10422_complete:A_BomoN4EE_TR28426_c0_g1_i1
111bp
470 O_BomoN4EE10423_complete:A_BomoN4EE_TR28426_c0_g1_i2
219bp
 cadherin-like_membrane_protein_[Bombyx_mori]
471 O_BomoN4EE10424_complete:A_BomoN4EE_TR28426_c0_g1_i2
180bp
472 O_BomoN4EE10425_complete:A_BomoN4EE_TR28426_c0_g1_i3
230bp
 cadherin-like_membrane_protein_[Bombyx_mori]
473 O_BomoN4EE10426_complete:A_BomoN4EE_TR28426_c0_g1_i3
213bp
474 O_BomoN4EE10427_complete:A_BomoN4EE_TR28426_c0_g1_i4
1029bp
 cadherin-like_membrane_protein_precursor_[Bombyx_mori]
GO:0001764 P neuron migration
GO:0001932 P regulation of protein phosphorylation
GO:0004871 F obsolete signal transducer activity
GO:0004888 F transmembrane signaling receptor activity
GO:0004930 F G protein-coupled receptor activity
GO:0005509 F calcium ion binding
GO:0005886 C plasma membrane
GO:0007155 P cell adhesion
GO:0007156 P homophilic cell adhesion via plasma membrane adhesion molecules
GO:0007165 P signal transduction
GO:0007166 P cell surface receptor signaling pathway
GO:0007186 P G protein-coupled receptor signaling pathway
GO:0007275 P multicellular organism development
GO:0007413 P axonal fasciculation
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0032880 P regulation of protein localization
GO:0036514 P dopaminergic neuron axon guidance
GO:0036515 P serotonergic neuron axon guidance
GO:0042384 P cilium assembly
475 O_BomoN4EE10428_complete:A_BomoN4EE_TR28426_c0_g1_i4
698bp
 cadherin-like_membrane_protein_[Bombyx_mori]
GO:0005509 F calcium ion binding
GO:0005515 F protein binding
GO:0005886 C plasma membrane
GO:0006816 P calcium ion transport
GO:0007155 P cell adhesion
GO:0007156 P homophilic cell adhesion via plasma membrane adhesion molecules
GO:0007601 P visual perception
GO:0007605 P sensory perception of sound
GO:0007626 P locomotory behavior
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016339 P calcium-dependent cell-cell adhesion via plasma membrane cell adhesion molecules
GO:0032420 C stereocilium
GO:0045494 P photoreceptor cell maintenance
GO:0046872 F metal ion binding
GO:0050896 P response to stimulus
GO:0050953 P sensory perception of light stimulus
GO:0050957 P equilibrioception
GO:0051480 P regulation of cytosolic calcium ion concentration
GO:0060122 P inner ear receptor cell stereocilium organization
476 O_BomoN4EE10429_complete:A_BomoN4EE_TR28426_c0_g1_i4
213bp
477 O_BomoN4EE1042_internal:A_BomoN4EE_TR14189_c0_g1_i1
184bp
 PREDICTED:_SCY1-like_protein_2_[Bombyx_mori]
GO:0002092 P positive regulation of receptor internalization
GO:0004672 F protein kinase activity
GO:0005102 F signaling receptor binding
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005768 C endosome
GO:0005794 C Golgi apparatus
GO:0006468 P protein phosphorylation
GO:0008333 P endosome to lysosome transport
GO:0010008 C endosome membrane
GO:0016020 C membrane
GO:0030136 C clathrin-coated vesicle
GO:0031410 C cytoplasmic vesicle
GO:0048471 C perinuclear region of cytoplasm
GO:0090090 P negative regulation of canonical Wnt signaling pathway
GO:2000286 P receptor internalization involved in canonical Wnt signaling pathway
GO:2000370 P positive regulation of clathrin-dependent endocytosis
478 O_BomoN4EE10430_complete:A_BomoN4EE_TR28426_c0_g1_i4
120bp
479 O_BomoN4EE10431_complete:A_BomoN4EE_TR28426_c0_g1_i4
111bp
480 O_BomoN4EE10432_complete:A_BomoN4EE_TR28426_c0_g1_i4
100bp
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