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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
3301 O_BomoN4EE12972_complete:A_BomoN4EE_TR30577_c0_g2_i1
216bp
 PREDICTED:_zinc_finger_protein_79-like_[Amyelois_transitella]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
3302 O_BomoN4EE12973_complete:A_BomoN4EE_TR30577_c0_g2_i1
137bp
 _hypothetical_protein_BOS_15182_[Bos_taurus]
3303 O_BomoN4EE12974_3prime_partial:A_BomoN4EE_TR30577_c0_g2_i1
131bp
 PREDICTED:_zinc_finger_protein_699-like_isoform_X1_[Bombyx_mori]
3304 O_BomoN4EE12975_complete:A_BomoN4EE_TR30577_c0_g3_i1
598bp
 PREDICTED:_zinc_finger_protein_699-like_isoform_X4_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007010 P cytoskeleton organization
GO:0022604 P regulation of cell morphogenesis
GO:0046872 F metal ion binding
3305 O_BomoN4EE12976_complete:A_BomoN4EE_TR30577_c0_g3_i1
137bp
 _hypothetical_protein_BOS_15182_[Bos_taurus]
3306 O_BomoN4EE12977_3prime_partial:A_BomoN4EE_TR30577_c0_g3_i1
131bp
 PREDICTED:_zinc_finger_protein_699-like_isoform_X1_[Bombyx_mori]
3307 O_BomoN4EE12978_complete:A_BomoN4EE_TR30577_c0_g3_i1
128bp
3308 O_BomoN4EE12979_complete:A_BomoN4EE_TR30577_c0_g4_i2
563bp
 PREDICTED:_LOW_QUALITY_PROTEIN:_cytochrome_P450_4g15-like_[Bombyx_mori]
GO:0004497 F monooxygenase activity
GO:0005506 F iron ion binding
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0006694 P steroid biosynthetic process
GO:0009055 F electron transfer activity
GO:0016020 C membrane
GO:0016491 F oxidoreductase activity
GO:0016705 F oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0019233 P sensory perception of pain
GO:0020037 F heme binding
GO:0031090 C organelle membrane
GO:0043231 C intracellular membrane-bounded organelle
GO:0046872 F metal ion binding
GO:0055114 P obsolete oxidation-reduction process
3309 O_BomoN4EE1297_complete:A_BomoN4EE_TR17853_c0_g1_i1
122bp
3310 O_BomoN4EE12980_complete:A_BomoN4EE_TR30577_c0_g4_i4
343bp
 PREDICTED:_LOW_QUALITY_PROTEIN:_cytochrome_P450_4g15-like_[Bombyx_mori]
GO:0004497 F monooxygenase activity
GO:0005506 F iron ion binding
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0006694 P steroid biosynthetic process
GO:0009055 F electron transfer activity
GO:0016020 C membrane
GO:0016491 F oxidoreductase activity
GO:0016705 F oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0019233 P sensory perception of pain
GO:0020037 F heme binding
GO:0031090 C organelle membrane
GO:0043231 C intracellular membrane-bounded organelle
GO:0046872 F metal ion binding
GO:0055114 P obsolete oxidation-reduction process
3311 O_BomoN4EE12981_complete:A_BomoN4EE_TR30577_c0_g4_i5
563bp
 PREDICTED:_LOW_QUALITY_PROTEIN:_cytochrome_P450_4g15-like_[Bombyx_mori]
GO:0004497 F monooxygenase activity
GO:0005506 F iron ion binding
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0006694 P steroid biosynthetic process
GO:0009055 F electron transfer activity
GO:0016020 C membrane
GO:0016491 F oxidoreductase activity
GO:0016705 F oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0019233 P sensory perception of pain
GO:0020037 F heme binding
GO:0031090 C organelle membrane
GO:0043231 C intracellular membrane-bounded organelle
GO:0046872 F metal ion binding
GO:0055114 P obsolete oxidation-reduction process
3312 O_BomoN4EE12982_complete:A_BomoN4EE_TR30579_c2_g1_i1
980bp
 PREDICTED:_exosome_complex_exonuclease_RRP44_isoform_X1_[Amyelois_transitella]
GO:0000175 F 3'-5'-exoribonuclease activity
GO:0000176 C nuclear exosome (RNase complex)
GO:0000177 C cytoplasmic exosome (RNase complex)
GO:0000178 C exosome (RNase complex)
GO:0003723 F RNA binding
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0004527 F exonuclease activity
GO:0005085 F guanyl-nucleotide exchange factor activity
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0006364 P rRNA processing
GO:0006402 P mRNA catabolic process
GO:0016020 C membrane
GO:0016075 P rRNA catabolic process
GO:0016787 F hydrolase activity
GO:0043547 P positive regulation of GTPase activity
GO:0071034 P CUT catabolic process
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
GO:0090503 P RNA phosphodiester bond hydrolysis, exonucleolytic
3313 O_BomoN4EE12983_complete:A_BomoN4EE_TR30579_c2_g1_i1
628bp
 PREDICTED:_uncharacterized_protein_LOC106142857_[Amyelois_transitella]
3314 O_BomoN4EE12984_complete:A_BomoN4EE_TR30579_c2_g1_i1
101bp
3315 O_BomoN4EE12985_complete:A_BomoN4EE_TR30579_c2_g1_i2
628bp
 PREDICTED:_uncharacterized_protein_LOC106142857_[Amyelois_transitella]
3316 O_BomoN4EE12986_5prime_partial:A_BomoN4EE_TR30579_c2_g1_i2
524bp
 PREDICTED:_exosome_complex_exonuclease_RRP44_[Bombyx_mori]
GO:0000175 F 3'-5'-exoribonuclease activity
GO:0000176 C nuclear exosome (RNase complex)
GO:0000177 C cytoplasmic exosome (RNase complex)
GO:0000178 C exosome (RNase complex)
GO:0003723 F RNA binding
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0004527 F exonuclease activity
GO:0005085 F guanyl-nucleotide exchange factor activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006364 P rRNA processing
GO:0006402 P mRNA catabolic process
GO:0016020 C membrane
GO:0016075 P rRNA catabolic process
GO:0016787 F hydrolase activity
GO:0043488 P regulation of mRNA stability
GO:0043547 P positive regulation of GTPase activity
GO:0043928 P exonucleolytic catabolism of deadenylated mRNA
GO:0071034 P CUT catabolic process
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
GO:0090503 P RNA phosphodiester bond hydrolysis, exonucleolytic
3317 O_BomoN4EE12987_complete:A_BomoN4EE_TR30579_c2_g1_i2
101bp
3318 O_BomoN4EE12988_complete:A_BomoN4EE_TR30580_c4_g1_i1
207bp
 PREDICTED:_sin3_histone_deacetylase_corepressor_complex_component_SDS3_isoform_X2_[Plutella_xylostella]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0004407 F histone deacetylase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006915 P apoptotic process
GO:0016568 P chromatin organization
GO:0016575 P histone deacetylation
GO:0016580 C Sin3 complex
GO:0019899 F enzyme binding
GO:0042802 F identical protein binding
GO:0042803 F protein homodimerization activity
GO:0042826 F histone deacetylase binding
GO:0043065 P positive regulation of apoptotic process
GO:0045892 P negative regulation of transcription, DNA-templated
3319 O_BomoN4EE12989_complete:A_BomoN4EE_TR30580_c4_g1_i1
143bp
 PREDICTED:_sin3_histone_deacetylase_corepressor_complex_component_SDS3_[Amyelois_transitella]
GO:0004407 F histone deacetylase activity
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006915 P apoptotic process
GO:0016568 P chromatin organization
GO:0016575 P histone deacetylation
GO:0043065 P positive regulation of apoptotic process
3320 O_BomoN4EE1298_complete:A_BomoN4EE_TR17879_c0_g1_i1
332bp
 PREDICTED:_probable_cytochrome_P450_301a1,_mitochondrial_[Amyelois_transitella]
GO:0004497 F monooxygenase activity
GO:0005506 F iron ion binding
GO:0005739 C mitochondrion
GO:0007490 P tergite morphogenesis
GO:0009055 F electron transfer activity
GO:0016020 C membrane
GO:0016491 F oxidoreductase activity
GO:0016705 F oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0020037 F heme binding
GO:0031966 C mitochondrial membrane
GO:0046872 F metal ion binding
GO:0055114 P obsolete oxidation-reduction process
3321 O_BomoN4EE12990_complete:A_BomoN4EE_TR30580_c4_g1_i1
114bp
3322 O_BomoN4EE12991_complete:A_BomoN4EE_TR30580_c5_g1_i1
440bp
 PREDICTED:_NAD_kinase_2,_mitochondrial_[Papilio_xuthus]
GO:0000166 F nucleotide binding
GO:0003951 F NAD+ kinase activity
GO:0005524 F ATP binding
GO:0005739 C mitochondrion
GO:0006741 P NADP biosynthetic process
GO:0008152 P metabolic process
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0019674 P NAD metabolic process
GO:0042803 F protein homodimerization activity
3323 O_BomoN4EE12992_complete:A_BomoN4EE_TR30580_c5_g1_i1
129bp
3324 O_BomoN4EE12993_complete:A_BomoN4EE_TR30580_c5_g1_i1
100bp
3325 O_BomoN4EE12994_complete:A_BomoN4EE_TR30580_c5_g2_i1
155bp
 PREDICTED:_NAD_kinase_2,_mitochondrial_[Papilio_xuthus]
GO:0000166 F nucleotide binding
GO:0003951 F NAD+ kinase activity
GO:0005524 F ATP binding
GO:0005739 C mitochondrion
GO:0006741 P NADP biosynthetic process
GO:0008152 P metabolic process
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0019674 P NAD metabolic process
GO:0042803 F protein homodimerization activity
3326 O_BomoN4EE12995_complete:A_BomoN4EE_TR30580_c6_g2_i2
250bp
 PREDICTED:_zinc_finger_protein_35_isoform_X3_[Bombyx_mori]
GO:0000977 F RNA polymerase II transcription regulatory region sequence-specific DNA binding
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007275 P multicellular organism development
GO:0007283 P spermatogenesis
GO:0030154 P cell differentiation
GO:0046872 F metal ion binding
3327 O_BomoN4EE12996_complete:A_BomoN4EE_TR30580_c6_g2_i2
138bp
3328 O_BomoN4EE12997_complete:A_BomoN4EE_TR30580_c6_g2_i2
133bp
3329 O_BomoN4EE12998_complete:A_BomoN4EE_TR30580_c6_g2_i2
105bp
3330 O_BomoN4EE12999_complete:A_BomoN4EE_TR30580_c6_g2_i3
847bp
 PREDICTED:_zinc_finger_protein_35_isoform_X1_[Bombyx_mori]
GO:0000977 F RNA polymerase II transcription regulatory region sequence-specific DNA binding
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007275 P multicellular organism development
GO:0007283 P spermatogenesis
GO:0030154 P cell differentiation
GO:0046872 F metal ion binding
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