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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
31 O_BomoN4EE10028_complete:A_BomoN4EE_TR28388_c0_g2_i4
117bp
32 O_BomoN4EE10029_complete:A_BomoN4EE_TR28388_c0_g2_i5
447bp
 PREDICTED:_uncharacterized_protein_LOC106136054,_partial_[Amyelois_transitella]
33 O_BomoN4EE1002_internal:A_BomoN4EE_TR13463_c0_g1_i1
250bp
 PREDICTED:_uncharacterized_protein_LOC101738384_[Bombyx_mori]
34 O_BomoN4EE10030_complete:A_BomoN4EE_TR28388_c0_g2_i5
379bp
 Dipeptidase_1_[Papilio_machaon]
GO:0005515 F protein binding
GO:0005615 C extracellular space
GO:0005886 C plasma membrane
GO:0006508 P proteolysis
GO:0006691 P leukotriene metabolic process
GO:0006749 P glutathione metabolic process
GO:0006805 P xenobiotic metabolic process
GO:0008233 F peptidase activity
GO:0008235 F metalloexopeptidase activity
GO:0008237 F metallopeptidase activity
GO:0008239 F dipeptidyl-peptidase activity
GO:0008270 F zinc ion binding
GO:0016020 C membrane
GO:0016324 C apical plasma membrane
GO:0016787 F hydrolase activity
GO:0016805 F dipeptidase activity
GO:0016999 P antibiotic metabolic process
GO:0030336 P negative regulation of cell migration
GO:0031225 C anchored component of membrane
GO:0031528 C microvillus membrane
GO:0034235 F GPI anchor binding
GO:0035690 P cellular response to xenobiotic stimulus
GO:0042995 C cell projection
GO:0043027 F cysteine-type endopeptidase inhibitor activity involved in apoptotic process
GO:0043066 P negative regulation of apoptotic process
GO:0043154 P negative regulation of cysteine-type endopeptidase activity involved in apoptotic process
GO:0045177 C apical part of cell
GO:0046872 F metal ion binding
GO:0050667 P homocysteine metabolic process
GO:0070062 C extracellular exosome
GO:0070573 F metallodipeptidase activity
GO:0071277 P cellular response to calcium ion
GO:0071732 P cellular response to nitric oxide
GO:0072340 P cellular lactam catabolic process
GO:0072341 F modified amino acid binding
35 O_BomoN4EE10031_complete:A_BomoN4EE_TR28388_c0_g2_i5
117bp
36 O_BomoN4EE10032_complete:A_BomoN4EE_TR28388_c0_g2_i6
814bp
 hypothetical_protein_KGM_03031_[Danaus_plexippus]
GO:0005515 F protein binding
GO:0005615 C extracellular space
GO:0005886 C plasma membrane
GO:0006508 P proteolysis
GO:0006691 P leukotriene metabolic process
GO:0006749 P glutathione metabolic process
GO:0006805 P xenobiotic metabolic process
GO:0008233 F peptidase activity
GO:0008235 F metalloexopeptidase activity
GO:0008237 F metallopeptidase activity
GO:0008239 F dipeptidyl-peptidase activity
GO:0008270 F zinc ion binding
GO:0016020 C membrane
GO:0016324 C apical plasma membrane
GO:0016787 F hydrolase activity
GO:0016805 F dipeptidase activity
GO:0016999 P antibiotic metabolic process
GO:0030336 P negative regulation of cell migration
GO:0031225 C anchored component of membrane
GO:0031528 C microvillus membrane
GO:0034235 F GPI anchor binding
GO:0035690 P cellular response to xenobiotic stimulus
GO:0042995 C cell projection
GO:0043027 F cysteine-type endopeptidase inhibitor activity involved in apoptotic process
GO:0043066 P negative regulation of apoptotic process
GO:0043154 P negative regulation of cysteine-type endopeptidase activity involved in apoptotic process
GO:0045177 C apical part of cell
GO:0046872 F metal ion binding
GO:0050667 P homocysteine metabolic process
GO:0070062 C extracellular exosome
GO:0070573 F metallodipeptidase activity
GO:0071277 P cellular response to calcium ion
GO:0071732 P cellular response to nitric oxide
GO:0072340 P cellular lactam catabolic process
GO:0072341 F modified amino acid binding
37 O_BomoN4EE10033_complete:A_BomoN4EE_TR28388_c0_g2_i6
117bp
38 O_BomoN4EE10034_complete:A_BomoN4EE_TR28388_c0_g2_i7
447bp
 PREDICTED:_uncharacterized_protein_LOC106136054,_partial_[Amyelois_transitella]
39 O_BomoN4EE10035_complete:A_BomoN4EE_TR28388_c0_g2_i7
302bp
 Dipeptidase_1_[Papilio_machaon]
GO:0005515 F protein binding
GO:0005615 C extracellular space
GO:0005886 C plasma membrane
GO:0006508 P proteolysis
GO:0006691 P leukotriene metabolic process
GO:0006749 P glutathione metabolic process
GO:0006805 P xenobiotic metabolic process
GO:0008233 F peptidase activity
GO:0008235 F metalloexopeptidase activity
GO:0008237 F metallopeptidase activity
GO:0008239 F dipeptidyl-peptidase activity
GO:0008270 F zinc ion binding
GO:0016020 C membrane
GO:0016324 C apical plasma membrane
GO:0016787 F hydrolase activity
GO:0016805 F dipeptidase activity
GO:0016999 P antibiotic metabolic process
GO:0030336 P negative regulation of cell migration
GO:0031225 C anchored component of membrane
GO:0031528 C microvillus membrane
GO:0034235 F GPI anchor binding
GO:0035690 P cellular response to xenobiotic stimulus
GO:0042995 C cell projection
GO:0043027 F cysteine-type endopeptidase inhibitor activity involved in apoptotic process
GO:0043066 P negative regulation of apoptotic process
GO:0043154 P negative regulation of cysteine-type endopeptidase activity involved in apoptotic process
GO:0045177 C apical part of cell
GO:0046872 F metal ion binding
GO:0050667 P homocysteine metabolic process
GO:0070062 C extracellular exosome
GO:0070573 F metallodipeptidase activity
GO:0071277 P cellular response to calcium ion
GO:0071732 P cellular response to nitric oxide
GO:0072340 P cellular lactam catabolic process
GO:0072341 F modified amino acid binding
40 O_BomoN4EE10036_complete:A_BomoN4EE_TR28388_c0_g2_i7
117bp
41 O_BomoN4EE10037_complete:A_BomoN4EE_TR28389_c0_g1_i1
599bp
 PREDICTED:_heterogeneous_nuclear_ribonucleoprotein_Q_isoform_X1_[Amyelois_transitella]
GO:0000166 F nucleotide binding
GO:0001649 P osteoblast differentiation
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003730 F mRNA 3'-UTR binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005681 C spliceosomal complex
GO:0005737 C cytoplasm
GO:0005783 C endoplasmic reticulum
GO:0006397 P mRNA processing
GO:0007623 P circadian rhythm
GO:0008143 F poly(A) binding
GO:0008380 P RNA splicing
GO:0016020 C membrane
GO:0017148 P negative regulation of translation
GO:0030529 C ribonucleoprotein complex
GO:0043025 C neuronal cell body
GO:0043231 C intracellular membrane-bounded organelle
GO:0044822 F RNA binding
GO:0045727 P positive regulation of translation
GO:0048027 F mRNA 5'-UTR binding
GO:0070934 P CRD-mediated mRNA stabilization
GO:0070937 C CRD-mediated mRNA stability complex
GO:0071013 C catalytic step 2 spliceosome
GO:0071204 C histone pre-mRNA 3'end processing complex
GO:0071346 P cellular response to interferon-gamma
GO:0090367 P negative regulation of mRNA modification
GO:0097452 C GAIT complex
GO:1990635 C proximal dendrite
42 O_BomoN4EE10038_5prime_partial:A_BomoN4EE_TR28389_c0_g1_i1
237bp
43 O_BomoN4EE10039_3prime_partial:A_BomoN4EE_TR28389_c0_g1_i1
140bp
44 O_BomoN4EE1003_5prime_partial:A_BomoN4EE_TR13463_c0_g1_i1
129bp
45 O_BomoN4EE10040_3prime_partial:A_BomoN4EE_TR28389_c0_g1_i2
270bp
 PREDICTED:_heterogeneous_nuclear_ribonucleoprotein_R_isoform_X1_[Papilio_machaon]
GO:0000166 F nucleotide binding
GO:0000398 P mRNA splicing, via spliceosome
GO:0001649 P osteoblast differentiation
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003730 F mRNA 3'-UTR binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005681 C spliceosomal complex
GO:0005737 C cytoplasm
GO:0005783 C endoplasmic reticulum
GO:0006396 P RNA processing
GO:0006397 P mRNA processing
GO:0006417 P regulation of translation
GO:0007623 P circadian rhythm
GO:0008143 F poly(A) binding
GO:0008380 P RNA splicing
GO:0016020 C membrane
GO:0016032 P viral process
GO:0017148 P negative regulation of translation
GO:0030529 C ribonucleoprotein complex
GO:0043025 C neuronal cell body
GO:0043231 C intracellular membrane-bounded organelle
GO:0044822 F RNA binding
GO:0045727 P positive regulation of translation
GO:0048027 F mRNA 5'-UTR binding
GO:0070934 P CRD-mediated mRNA stabilization
GO:0070937 C CRD-mediated mRNA stability complex
GO:0071013 C catalytic step 2 spliceosome
GO:0071204 C histone pre-mRNA 3'end processing complex
GO:0071346 P cellular response to interferon-gamma
GO:0090367 P negative regulation of mRNA modification
GO:0097452 C GAIT complex
GO:1990635 C proximal dendrite
46 O_BomoN4EE10041_complete:A_BomoN4EE_TR28389_c0_g1_i3
262bp
 PREDICTED:_heterogeneous_nuclear_ribonucleoprotein_Q_isoform_X5_[Amyelois_transitella]
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003730 F mRNA 3'-UTR binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005681 C spliceosomal complex
GO:0005737 C cytoplasm
GO:0005783 C endoplasmic reticulum
GO:0006397 P mRNA processing
GO:0007623 P circadian rhythm
GO:0008380 P RNA splicing
GO:0016020 C membrane
GO:0030529 C ribonucleoprotein complex
GO:0043025 C neuronal cell body
GO:0043231 C intracellular membrane-bounded organelle
GO:0045727 P positive regulation of translation
GO:0048027 F mRNA 5'-UTR binding
GO:0070937 C CRD-mediated mRNA stability complex
GO:0071204 C histone pre-mRNA 3'end processing complex
GO:0090367 P negative regulation of mRNA modification
GO:1990635 C proximal dendrite
47 O_BomoN4EE10042_5prime_partial:A_BomoN4EE_TR28389_c0_g1_i3
237bp
48 O_BomoN4EE10043_3prime_partial:A_BomoN4EE_TR28389_c0_g1_i3
140bp
49 O_BomoN4EE10044_complete:A_BomoN4EE_TR28389_c0_g1_i3
122bp
50 O_BomoN4EE10045_complete:A_BomoN4EE_TR28389_c0_g1_i3
118bp
 Heterogeneous_nuclear_ribonucleoprotein_R_[Papilio_xuthus]
GO:0000166 F nucleotide binding
GO:0000398 P mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003730 F mRNA 3'-UTR binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005681 C spliceosomal complex
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0005783 C endoplasmic reticulum
GO:0006397 P mRNA processing
GO:0007623 P circadian rhythm
GO:0008380 P RNA splicing
GO:0010467 P gene expression
GO:0030425 C dendrite
GO:0030426 C growth cone
GO:0030529 C ribonucleoprotein complex
GO:0043086 P negative regulation of catalytic activity
GO:0043231 C intracellular membrane-bounded organelle
GO:0043679 C axon terminus
GO:0044822 F RNA binding
GO:0061014 P positive regulation of mRNA catabolic process
GO:0061157 P mRNA destabilization
GO:0071013 C catalytic step 2 spliceosome
51 O_BomoN4EE10046_complete:A_BomoN4EE_TR28389_c0_g1_i3
111bp
52 O_BomoN4EE10047_complete:A_BomoN4EE_TR28389_c0_g1_i4
181bp
 PREDICTED:_heterogeneous_nuclear_ribonucleoprotein_R_isoform_X3_[Amyelois_transitella]
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003730 F mRNA 3'-UTR binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005681 C spliceosomal complex
GO:0005737 C cytoplasm
GO:0005783 C endoplasmic reticulum
GO:0006397 P mRNA processing
GO:0007623 P circadian rhythm
GO:0008380 P RNA splicing
GO:0016020 C membrane
GO:0030529 C ribonucleoprotein complex
GO:0043025 C neuronal cell body
GO:0043231 C intracellular membrane-bounded organelle
GO:0045727 P positive regulation of translation
GO:0048027 F mRNA 5'-UTR binding
GO:0070937 C CRD-mediated mRNA stability complex
GO:0071204 C histone pre-mRNA 3'end processing complex
GO:0090367 P negative regulation of mRNA modification
GO:1990635 C proximal dendrite
53 O_BomoN4EE10048_complete:A_BomoN4EE_TR28389_c0_g1_i4
118bp
 Heterogeneous_nuclear_ribonucleoprotein_R_[Papilio_xuthus]
GO:0000166 F nucleotide binding
GO:0000398 P mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003730 F mRNA 3'-UTR binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005681 C spliceosomal complex
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0005783 C endoplasmic reticulum
GO:0006397 P mRNA processing
GO:0007623 P circadian rhythm
GO:0008380 P RNA splicing
GO:0010467 P gene expression
GO:0030425 C dendrite
GO:0030426 C growth cone
GO:0030529 C ribonucleoprotein complex
GO:0043086 P negative regulation of catalytic activity
GO:0043231 C intracellular membrane-bounded organelle
GO:0043679 C axon terminus
GO:0044822 F RNA binding
GO:0061014 P positive regulation of mRNA catabolic process
GO:0061157 P mRNA destabilization
GO:0071013 C catalytic step 2 spliceosome
54 O_BomoN4EE10049_complete:A_BomoN4EE_TR28389_c0_g1_i4
111bp
55 O_BomoN4EE1004_5prime_partial:A_BomoN4EE_TR13463_c0_g1_i1
117bp
56 O_BomoN4EE10050_complete:A_BomoN4EE_TR28389_c0_g1_i5
359bp
 PREDICTED:_heterogeneous_nuclear_ribonucleoprotein_R_isoform_X3_[Amyelois_transitella]
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003730 F mRNA 3'-UTR binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005681 C spliceosomal complex
GO:0005737 C cytoplasm
GO:0005783 C endoplasmic reticulum
GO:0006397 P mRNA processing
GO:0007623 P circadian rhythm
GO:0008380 P RNA splicing
GO:0016020 C membrane
GO:0030529 C ribonucleoprotein complex
GO:0043025 C neuronal cell body
GO:0043231 C intracellular membrane-bounded organelle
GO:0045727 P positive regulation of translation
GO:0048027 F mRNA 5'-UTR binding
GO:0070937 C CRD-mediated mRNA stability complex
GO:0071204 C histone pre-mRNA 3'end processing complex
GO:0090367 P negative regulation of mRNA modification
GO:1990635 C proximal dendrite
57 O_BomoN4EE10051_complete:A_BomoN4EE_TR28389_c0_g1_i6
599bp
 PREDICTED:_heterogeneous_nuclear_ribonucleoprotein_Q_isoform_X1_[Amyelois_transitella]
GO:0000166 F nucleotide binding
GO:0001649 P osteoblast differentiation
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003730 F mRNA 3'-UTR binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005681 C spliceosomal complex
GO:0005737 C cytoplasm
GO:0005783 C endoplasmic reticulum
GO:0006397 P mRNA processing
GO:0007623 P circadian rhythm
GO:0008143 F poly(A) binding
GO:0008380 P RNA splicing
GO:0016020 C membrane
GO:0017148 P negative regulation of translation
GO:0030529 C ribonucleoprotein complex
GO:0043025 C neuronal cell body
GO:0043231 C intracellular membrane-bounded organelle
GO:0044822 F RNA binding
GO:0045727 P positive regulation of translation
GO:0048027 F mRNA 5'-UTR binding
GO:0070934 P CRD-mediated mRNA stabilization
GO:0070937 C CRD-mediated mRNA stability complex
GO:0071013 C catalytic step 2 spliceosome
GO:0071204 C histone pre-mRNA 3'end processing complex
GO:0071346 P cellular response to interferon-gamma
GO:0090367 P negative regulation of mRNA modification
GO:0097452 C GAIT complex
GO:1990635 C proximal dendrite
58 O_BomoN4EE10052_5prime_partial:A_BomoN4EE_TR28389_c0_g1_i6
237bp
59 O_BomoN4EE10053_3prime_partial:A_BomoN4EE_TR28389_c0_g1_i6
140bp
60 O_BomoN4EE10054_complete:A_BomoN4EE_TR28389_c0_g1_i7
518bp
 PREDICTED:_heterogeneous_nuclear_ribonucleoprotein_R_isoform_X3_[Amyelois_transitella]
GO:0000166 F nucleotide binding
GO:0001649 P osteoblast differentiation
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003730 F mRNA 3'-UTR binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005681 C spliceosomal complex
GO:0005737 C cytoplasm
GO:0005783 C endoplasmic reticulum
GO:0006397 P mRNA processing
GO:0007623 P circadian rhythm
GO:0008143 F poly(A) binding
GO:0008380 P RNA splicing
GO:0016020 C membrane
GO:0017148 P negative regulation of translation
GO:0030529 C ribonucleoprotein complex
GO:0043025 C neuronal cell body
GO:0043231 C intracellular membrane-bounded organelle
GO:0044822 F RNA binding
GO:0045727 P positive regulation of translation
GO:0048027 F mRNA 5'-UTR binding
GO:0070934 P CRD-mediated mRNA stabilization
GO:0070937 C CRD-mediated mRNA stability complex
GO:0071013 C catalytic step 2 spliceosome
GO:0071204 C histone pre-mRNA 3'end processing complex
GO:0071346 P cellular response to interferon-gamma
GO:0090367 P negative regulation of mRNA modification
GO:0097452 C GAIT complex
GO:1990635 C proximal dendrite
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