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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
3061 O_BomoN4EE12756_internal:A_BomoN4EE_TR30242_c0_g1_i1
117bp
 PREDICTED:_microtubule-associated_protein_futsch-like_[Bombyx_mori]
3062 O_BomoN4EE12757_internal:A_BomoN4EE_TR30242_c0_g2_i1
207bp
 PREDICTED:_microtubule-associated_protein_futsch-like_[Bombyx_mori]
GO:0000226 P microtubule cytoskeleton organization
GO:0001552 P ovarian follicle atresia
GO:0005198 F structural molecule activity
GO:0005200 F structural constituent of cytoskeleton
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005882 C intermediate filament
GO:0005883 C neurofilament
GO:0007409 P axonogenesis
GO:0007420 P brain development
GO:0008017 F microtubule binding
GO:0015643 F toxic substance binding
GO:0019894 F kinesin binding
GO:0019901 F protein kinase binding
GO:0021510 P spinal cord development
GO:0021766 P hippocampus development
GO:0021987 P cerebral cortex development
GO:0030031 P cell projection assembly
GO:0030424 C axon
GO:0030674 F protein-macromolecule adaptor activity
GO:0031103 P axon regeneration
GO:0031175 P neuron projection development
GO:0033693 P neurofilament bundle assembly
GO:0034599 P cellular response to oxidative stress
GO:0042220 P response to cocaine
GO:0043204 C perikaryon
GO:0043209 C myelin sheath
GO:0045104 P intermediate filament cytoskeleton organization
GO:0045110 P intermediate filament bundle assembly
GO:0045502 F dynein complex binding
GO:0046982 F protein heterodimerization activity
GO:0048936 P peripheral nervous system neuron axonogenesis
GO:0060052 P neurofilament cytoskeleton organization
GO:0061564 P axon development
GO:0071392 P cellular response to estradiol stimulus
GO:0097418 C neurofibrillary tangle
GO:0097481 C postsynaptic density
GO:1902513 P regulation of organelle transport along microtubule
GO:1903935 P response to sodium arsenite
GO:1903937 P response to acrylamide
3063 O_BomoN4EE12758_internal:A_BomoN4EE_TR30242_c0_g2_i1
207bp
 hypothetical_protein_LOTGIDRAFT_109628_[Lottia_gigantea]
3064 O_BomoN4EE12759_internal:A_BomoN4EE_TR30251_c0_g1_i1
219bp
 putative_beta-hexosaminidase_fdl_[Papilio_xuthus]
GO:0004553 F hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0004563 F beta-N-acetylhexosaminidase activity
GO:0005770 C late endosome
GO:0005783 C endoplasmic reticulum
GO:0005794 C Golgi apparatus
GO:0005886 C plasma membrane
GO:0005975 P carbohydrate metabolic process
GO:0006032 P chitin catabolic process
GO:0006491 P N-glycan processing
GO:0006517 P protein deglycosylation
GO:0007275 P multicellular organism development
GO:0007420 P brain development
GO:0008152 P metabolic process
GO:0016063 P rhodopsin biosynthetic process
GO:0016231 F beta-N-acetylglucosaminidase activity
GO:0016787 F hydrolase activity
GO:0016798 F hydrolase activity, acting on glycosyl bonds
GO:0032428 F beta-N-acetylgalactosaminidase activity
3065 O_BomoN4EE1275_complete:A_BomoN4EE_TR17471_c0_g1_i1
500bp
 PREDICTED:_E3_ubiquitin-protein_ligase_MYLIP_[Papilio_polytes]
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0007275 P multicellular organism development
GO:0007369 P gastrulation
GO:0008270 F zinc ion binding
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0030178 P negative regulation of Wnt signaling pathway
GO:0046872 F metal ion binding
3066 O_BomoN4EE12760_5prime_partial:A_BomoN4EE_TR30287_c0_g1_i1
104bp
3067 O_BomoN4EE12761_internal:A_BomoN4EE_TR30290_c0_g1_i1
113bp
 PREDICTED:_uncharacterized_protein_LOC101735671_isoform_X1_[Bombyx_mori]
3068 O_BomoN4EE12762_3prime_partial:A_BomoN4EE_TR30383_c0_g1_i1
103bp
 PREDICTED:_coiled-coil_and_C2_domain-containing_protein_2A_[Bombyx_mori]
GO:0001843 P neural tube closure
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005929 C cilium
GO:0007224 P smoothened signaling pathway
GO:0007368 P determination of left/right symmetry
GO:0007507 P heart development
GO:0030030 P cell projection organization
GO:0035058 P non-motile cilium assembly
GO:0035082 P axoneme assembly
GO:0035869 C ciliary transition zone
GO:0036038 C MKS complex
GO:0042384 P cilium assembly
GO:0042995 C cell projection
GO:0043010 P camera-type eye development
GO:0044458 P motile cilium assembly
GO:0060271 P cilium assembly
GO:1903887 P motile cilium assembly
GO:1904491 P protein localization to ciliary transition zone
GO:1990403 P embryonic brain development
3069 O_BomoN4EE12763_complete:A_BomoN4EE_TR30403_c0_g1_i1
118bp
 PREDICTED:_uncharacterized_protein_LOC106122490_[Papilio_xuthus]
3070 O_BomoN4EE12764_complete:A_BomoN4EE_TR30403_c0_g1_i2
195bp
 PREDICTED:_uncharacterized_protein_LOC101741926_[Bombyx_mori]
3071 O_BomoN4EE12765_3prime_partial:A_BomoN4EE_TR30407_c0_g1_i1
678bp
 PREDICTED:_uncharacterized_protein_LOC101737763_[Bombyx_mori]
3072 O_BomoN4EE12766_5prime_partial:A_BomoN4EE_TR30407_c0_g1_i1
124bp
 AT_hook_motif-containing_protein,_putative_[Eimeria_maxima]
3073 O_BomoN4EE12767_5prime_partial:A_BomoN4EE_TR30407_c1_g1_i1
175bp
 PREDICTED:_uncharacterized_protein_LOC101737763_[Bombyx_mori]
3074 O_BomoN4EE12768_internal:A_BomoN4EE_TR30408_c0_g1_i1
188bp
 hypothetical_protein_KGM_22219_[Danaus_plexippus]
GO:0005575 C cellular_component
GO:0008150 P biological_process
3075 O_BomoN4EE12769_complete:A_BomoN4EE_TR30408_c0_g1_i1
117bp
3076 O_BomoN4EE1276_complete:A_BomoN4EE_TR17471_c0_g1_i1
110bp
3077 O_BomoN4EE12770_complete:A_BomoN4EE_TR30411_c0_g2_i1
152bp
 PREDICTED:_uncharacterized_protein_LOC106718363_[Papilio_machaon]
3078 O_BomoN4EE12771_complete:A_BomoN4EE_TR30425_c0_g1_i1
288bp
 spermidine_synthase_[Antheraea_pernyi]
GO:0003824 F catalytic activity
GO:0004766 F spermidine synthase activity
GO:0006595 P polyamine metabolic process
GO:0006596 P polyamine biosynthetic process
GO:0008295 P spermidine biosynthetic process
GO:0016740 F transferase activity
GO:0042803 F protein homodimerization activity
3079 O_BomoN4EE12772_complete:A_BomoN4EE_TR30425_c0_g1_i1
101bp
3080 O_BomoN4EE12773_complete:A_BomoN4EE_TR30425_c0_g2_i1
288bp
 spermidine_synthase_[Antheraea_pernyi]
GO:0003824 F catalytic activity
GO:0004766 F spermidine synthase activity
GO:0006595 P polyamine metabolic process
GO:0006596 P polyamine biosynthetic process
GO:0008295 P spermidine biosynthetic process
GO:0016740 F transferase activity
GO:0042803 F protein homodimerization activity
3081 O_BomoN4EE12774_complete:A_BomoN4EE_TR30425_c0_g2_i1
101bp
3082 O_BomoN4EE12775_complete:A_BomoN4EE_TR30436_c0_g1_i1
1871bp
 PREDICTED:_uncharacterized_protein_LOC101745877_isoform_X2_[Bombyx_mori]
GO:0000976 F transcription cis-regulatory region binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0045893 P positive regulation of transcription, DNA-templated
3083 O_BomoN4EE12776_complete:A_BomoN4EE_TR30436_c0_g1_i1
110bp
3084 O_BomoN4EE12777_complete:A_BomoN4EE_TR30436_c0_g1_i1
102bp
3085 O_BomoN4EE12778_complete:A_BomoN4EE_TR30436_c0_g1_i1
100bp
3086 O_BomoN4EE12779_complete:A_BomoN4EE_TR30436_c0_g1_i2
1813bp
 PREDICTED:_uncharacterized_protein_LOC101745877_isoform_X3_[Bombyx_mori]
GO:0000976 F transcription cis-regulatory region binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0045893 P positive regulation of transcription, DNA-templated
3087 O_BomoN4EE1277_complete:A_BomoN4EE_TR17471_c0_g2_i1
500bp
 PREDICTED:_E3_ubiquitin-protein_ligase_MYLIP_[Papilio_polytes]
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0007275 P multicellular organism development
GO:0007369 P gastrulation
GO:0008270 F zinc ion binding
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0030178 P negative regulation of Wnt signaling pathway
GO:0046872 F metal ion binding
3088 O_BomoN4EE12780_complete:A_BomoN4EE_TR30436_c0_g1_i2
110bp
3089 O_BomoN4EE12781_complete:A_BomoN4EE_TR30436_c0_g1_i2
102bp
3090 O_BomoN4EE12782_complete:A_BomoN4EE_TR30436_c0_g1_i2
100bp
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