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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
3031 O_BomoN4EE12729_3prime_partial:A_BomoN4EE_TR30129_c0_g3_i5
146bp
 PREDICTED:_PRKCA-binding_protein_isoform_X2_[Bombyx_mori]
3032 O_BomoN4EE1272_3prime_partial:A_BomoN4EE_TR17458_c0_g1_i1
843bp
 PREDICTED:_LOW_QUALITY_PROTEIN:_papilin_[Bombyx_mori]
GO:0004222 F metalloendopeptidase activity
GO:0004867 F serine-type endopeptidase inhibitor activity
GO:0005201 F extracellular matrix structural constituent
GO:0005576 C extracellular region
GO:0005578 C extracellular matrix
GO:0005604 C basement membrane
GO:0006508 P proteolysis
GO:0007275 P multicellular organism development
GO:0008233 F peptidase activity
GO:0008237 F metallopeptidase activity
GO:0008270 F zinc ion binding
GO:0010466 P negative regulation of peptidase activity
GO:0010951 P negative regulation of endopeptidase activity
GO:0030198 P extracellular matrix organization
GO:0030414 F peptidase inhibitor activity
GO:0031012 C extracellular matrix
3033 O_BomoN4EE12730_3prime_partial:A_BomoN4EE_TR30129_c0_g3_i6
421bp
 PREDICTED:_PRKCA-binding_protein_isoform_X2_[Bombyx_mori]
GO:0001664 F G protein-coupled receptor binding
GO:0002092 P positive regulation of receptor internalization
GO:0003779 F actin binding
GO:0005080 F protein kinase C binding
GO:0005102 F signaling receptor binding
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0006468 P protein phosphorylation
GO:0007205 P protein kinase C-activating G protein-coupled receptor signaling pathway
GO:0008022 F protein C-terminus binding
GO:0010629 P negative regulation of gene expression
GO:0014069 C postsynaptic density
GO:0015844 P monoamine transport
GO:0015872 P dopamine transport
GO:0016020 C membrane
GO:0016887 F ATP hydrolysis activity
GO:0019904 F protein domain specific binding
GO:0021782 P glial cell development
GO:0030054 C cell junction
GO:0030425 C dendrite
GO:0030971 F receptor tyrosine kinase binding
GO:0034316 P negative regulation of Arp2/3 complex-mediated actin nucleation
GO:0035256 F G protein-coupled glutamate receptor binding
GO:0036294 P cellular response to decreased oxygen levels
GO:0042149 P cellular response to glucose starvation
GO:0042734 C presynaptic membrane
GO:0042802 F identical protein binding
GO:0043005 C neuron projection
GO:0043113 P receptor clustering
GO:0043234 C protein-containing complex
GO:0045202 C synapse
GO:0045211 C postsynaptic membrane
GO:0046872 F metal ion binding
GO:0046875 F ephrin receptor binding
GO:0048471 C perinuclear region of cytoplasm
GO:0051015 F actin filament binding
GO:0051020 F GTPase binding
GO:0060292 P long-term synaptic depression
GO:0060548 P negative regulation of cell death
GO:0071933 F Arp2/3 complex binding
GO:0097061 P dendritic spine organization
GO:0097062 P dendritic spine maintenance
3034 O_BomoN4EE12731_complete:A_BomoN4EE_TR30129_c0_g3_i7
363bp
 PREDICTED:_PRKCA-binding_protein_isoform_X2_[Bombyx_mori]
GO:0001664 F G protein-coupled receptor binding
GO:0002092 P positive regulation of receptor internalization
GO:0003779 F actin binding
GO:0005080 F protein kinase C binding
GO:0005102 F signaling receptor binding
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0006468 P protein phosphorylation
GO:0007205 P protein kinase C-activating G protein-coupled receptor signaling pathway
GO:0008022 F protein C-terminus binding
GO:0010629 P negative regulation of gene expression
GO:0014069 C postsynaptic density
GO:0015844 P monoamine transport
GO:0015872 P dopamine transport
GO:0016020 C membrane
GO:0016887 F ATP hydrolysis activity
GO:0019904 F protein domain specific binding
GO:0021782 P glial cell development
GO:0030054 C cell junction
GO:0030425 C dendrite
GO:0030971 F receptor tyrosine kinase binding
GO:0034316 P negative regulation of Arp2/3 complex-mediated actin nucleation
GO:0035256 F G protein-coupled glutamate receptor binding
GO:0036294 P cellular response to decreased oxygen levels
GO:0042149 P cellular response to glucose starvation
GO:0042734 C presynaptic membrane
GO:0042802 F identical protein binding
GO:0043005 C neuron projection
GO:0043113 P receptor clustering
GO:0043234 C protein-containing complex
GO:0045202 C synapse
GO:0045211 C postsynaptic membrane
GO:0046872 F metal ion binding
GO:0046875 F ephrin receptor binding
GO:0048471 C perinuclear region of cytoplasm
GO:0051015 F actin filament binding
GO:0051020 F GTPase binding
GO:0060292 P long-term synaptic depression
GO:0060548 P negative regulation of cell death
GO:0071933 F Arp2/3 complex binding
GO:0097061 P dendritic spine organization
GO:0097062 P dendritic spine maintenance
3035 O_BomoN4EE12732_complete:A_BomoN4EE_TR30129_c0_g3_i8
249bp
 PREDICTED:_PRKCA-binding_protein_isoform_X2_[Bombyx_mori]
GO:0001664 F G protein-coupled receptor binding
GO:0002092 P positive regulation of receptor internalization
GO:0003779 F actin binding
GO:0005080 F protein kinase C binding
GO:0005102 F signaling receptor binding
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005794 C Golgi apparatus
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0006468 P protein phosphorylation
GO:0006605 P protein targeting
GO:0007205 P protein kinase C-activating G protein-coupled receptor signaling pathway
GO:0007275 P multicellular organism development
GO:0008022 F protein C-terminus binding
GO:0014069 C postsynaptic density
GO:0015844 P monoamine transport
GO:0016020 C membrane
GO:0016887 F ATP hydrolysis activity
GO:0019899 F enzyme binding
GO:0019904 F protein domain specific binding
GO:0021782 P glial cell development
GO:0030054 C cell junction
GO:0034315 P regulation of Arp2/3 complex-mediated actin nucleation
GO:0034316 P negative regulation of Arp2/3 complex-mediated actin nucleation
GO:0035556 P intracellular signal transduction
GO:0036294 P cellular response to decreased oxygen levels
GO:0042149 P cellular response to glucose starvation
GO:0042734 C presynaptic membrane
GO:0042802 F identical protein binding
GO:0043005 C neuron projection
GO:0043113 P receptor clustering
GO:0045202 C synapse
GO:0045211 C postsynaptic membrane
GO:0046872 F metal ion binding
GO:0048471 C perinuclear region of cytoplasm
GO:0050803 P regulation of synapse structure or activity
GO:0051015 F actin filament binding
GO:0051260 P protein homooligomerization
GO:0060292 P long-term synaptic depression
GO:0071933 F Arp2/3 complex binding
GO:0097061 P dendritic spine organization
GO:0097062 P dendritic spine maintenance
GO:0097481 C postsynaptic density
3036 O_BomoN4EE12733_complete:A_BomoN4EE_TR30129_c0_g3_i9
312bp
 PREDICTED:_PRKCA-binding_protein_isoform_X2_[Bombyx_mori]
GO:0001664 F G protein-coupled receptor binding
GO:0002092 P positive regulation of receptor internalization
GO:0003779 F actin binding
GO:0005080 F protein kinase C binding
GO:0005102 F signaling receptor binding
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0006468 P protein phosphorylation
GO:0006890 P retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum
GO:0007205 P protein kinase C-activating G protein-coupled receptor signaling pathway
GO:0008022 F protein C-terminus binding
GO:0014069 C postsynaptic density
GO:0015844 P monoamine transport
GO:0016020 C membrane
GO:0016887 F ATP hydrolysis activity
GO:0019899 F enzyme binding
GO:0019904 F protein domain specific binding
GO:0021782 P glial cell development
GO:0030054 C cell junction
GO:0030666 C endocytic vesicle membrane
GO:0034315 P regulation of Arp2/3 complex-mediated actin nucleation
GO:0034316 P negative regulation of Arp2/3 complex-mediated actin nucleation
GO:0036294 P cellular response to decreased oxygen levels
GO:0042149 P cellular response to glucose starvation
GO:0042734 C presynaptic membrane
GO:0042802 F identical protein binding
GO:0043005 C neuron projection
GO:0043045 P DNA methylation involved in embryo development
GO:0043046 P DNA methylation involved in gamete generation
GO:0043113 P receptor clustering
GO:0045161 P neuronal ion channel clustering
GO:0045202 C synapse
GO:0045211 C postsynaptic membrane
GO:0046872 F metal ion binding
GO:0048471 C perinuclear region of cytoplasm
GO:0051015 F actin filament binding
GO:0060292 P long-term synaptic depression
GO:0071933 F Arp2/3 complex binding
GO:0097061 P dendritic spine organization
GO:0097062 P dendritic spine maintenance
3037 O_BomoN4EE12734_3prime_partial:A_BomoN4EE_TR30130_c0_g3_i1
129bp
 gag-like_protein_[Bombyx_mori]
3038 O_BomoN4EE12735_5prime_partial:A_BomoN4EE_TR30130_c0_g3_i1
104bp
3039 O_BomoN4EE12736_3prime_partial:A_BomoN4EE_TR30130_c0_g3_i2
129bp
 gag-like_protein_[Bombyx_mori]
3040 O_BomoN4EE12737_5prime_partial:A_BomoN4EE_TR30130_c0_g3_i2
104bp
3041 O_BomoN4EE12738_5prime_partial:A_BomoN4EE_TR30131_c0_g1_i1
104bp
 PREDICTED:_uncharacterized_protein_LOC105843014_[Bombyx_mori]
3042 O_BomoN4EE12739_5prime_partial:A_BomoN4EE_TR30131_c1_g1_i1
547bp
 reverse_transcriptase_[Bombyx_mori]
3043 O_BomoN4EE1273_complete:A_BomoN4EE_TR17458_c0_g1_i1
103bp
3044 O_BomoN4EE12740_3prime_partial:A_BomoN4EE_TR30131_c1_g1_i1
201bp
 PREDICTED:_uncharacterized_protein_LOC105843014_[Bombyx_mori]
3045 O_BomoN4EE12741_complete:A_BomoN4EE_TR30139_c0_g1_i1
111bp
3046 O_BomoN4EE12742_5prime_partial:A_BomoN4EE_TR30139_c0_g1_i1
107bp
3047 O_BomoN4EE12743_complete:A_BomoN4EE_TR30143_c0_g1_i1
289bp
 transcription_elongation_factor_S-II_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0006368 P transcription elongation from RNA polymerase II promoter
GO:0008270 F zinc ion binding
GO:0032784 P regulation of DNA-templated transcription, elongation
GO:0046872 F metal ion binding
3048 O_BomoN4EE12744_complete:A_BomoN4EE_TR30149_c0_g1_i1
692bp
 carboxylesterase_clade_H,_member_1_precursor_[Bombyx_mori]
GO:0005615 C extracellular space
GO:0005783 C endoplasmic reticulum
GO:0005788 C endoplasmic reticulum lumen
GO:0008152 P metabolic process
GO:0016787 F hydrolase activity
GO:0052689 F carboxylic ester hydrolase activity
GO:0070062 C extracellular exosome
3049 O_BomoN4EE12745_complete:A_BomoN4EE_TR30149_c0_g1_i1
183bp
3050 O_BomoN4EE12746_internal:A_BomoN4EE_TR30153_c0_g1_i1
126bp
 hypothetical_protein_WH47_02483_[Habropoda_laboriosa]
3051 O_BomoN4EE12747_complete:A_BomoN4EE_TR30154_c0_g1_i1
105bp
3052 O_BomoN4EE12748_5prime_partial:A_BomoN4EE_TR30160_c0_g1_i1
106bp
 serine_protease_24_[Mamestra_configurata]
3053 O_BomoN4EE12749_internal:A_BomoN4EE_TR30178_c0_g1_i1
202bp
 PREDICTED:_uncharacterized_protein_LOC101743946_[Bombyx_mori]
3054 O_BomoN4EE1274_complete:A_BomoN4EE_TR17458_c0_g1_i1
101bp
3055 O_BomoN4EE12750_internal:A_BomoN4EE_TR30206_c0_g1_i1
146bp
 PREDICTED:_arylphorin_subunit_beta-like_[Bombyx_mori]
3056 O_BomoN4EE12751_internal:A_BomoN4EE_TR30210_c0_g1_i1
127bp
 PREDICTED:_retinol_dehydrogenase_13-like_isoform_X2_[Amyelois_transitella]
GO:0001917 C photoreceptor inner segment
GO:0004745 F NAD-retinol dehydrogenase activity
GO:0005622 C intracellular anatomical structure
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016062 P adaptation of rhodopsin mediated signaling
GO:0016491 F oxidoreductase activity
GO:0042572 P retinol metabolic process
GO:0042574 P retinal metabolic process
GO:0042622 C photoreceptor outer segment membrane
GO:0052650 F NADP-retinol dehydrogenase activity
GO:0055114 P obsolete oxidation-reduction process
3057 O_BomoN4EE12752_complete:A_BomoN4EE_TR30222_c0_g1_i1
111bp
3058 O_BomoN4EE12753_5prime_partial:A_BomoN4EE_TR30239_c0_g1_i1
118bp
3059 O_BomoN4EE12754_internal:A_BomoN4EE_TR30241_c0_g1_i1
118bp
3060 O_BomoN4EE12755_internal:A_BomoN4EE_TR30242_c0_g1_i1
118bp
 hypothetical_protein_LOTGIDRAFT_109628_[Lottia_gigantea]
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