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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
2671 O_BomoN4EE12404_complete:A_BomoN4EE_TR30099_c0_g2_i5
143bp
 sid-1-related_gene3_precursor_[Bombyx_mori]
2672 O_BomoN4EE12405_5prime_partial:A_BomoN4EE_TR30100_c1_g2_i1
105bp
2673 O_BomoN4EE12406_complete:A_BomoN4EE_TR30100_c2_g2_i1
140bp
 PREDICTED:_thiamin_pyrophosphokinase_1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004788 F thiamine diphosphokinase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006772 P thiamine metabolic process
GO:0009228 P thiamine biosynthetic process
GO:0009229 P thiamine diphosphate biosynthetic process
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0016787 F hydrolase activity
GO:0030975 F thiamine binding
GO:0036172 P thiamine salvage
GO:0044715 F 8-oxo-dGDP phosphatase activity
2674 O_BomoN4EE12407_complete:A_BomoN4EE_TR30100_c2_g2_i2
153bp
 PREDICTED:_thiamin_pyrophosphokinase_1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004788 F thiamine diphosphokinase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006772 P thiamine metabolic process
GO:0009228 P thiamine biosynthetic process
GO:0009229 P thiamine diphosphate biosynthetic process
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0016787 F hydrolase activity
GO:0030975 F thiamine binding
GO:0036172 P thiamine salvage
GO:0044715 F 8-oxo-dGDP phosphatase activity
2675 O_BomoN4EE12408_complete:A_BomoN4EE_TR30100_c2_g2_i3
153bp
 PREDICTED:_thiamin_pyrophosphokinase_1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004788 F thiamine diphosphokinase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006772 P thiamine metabolic process
GO:0009228 P thiamine biosynthetic process
GO:0009229 P thiamine diphosphate biosynthetic process
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0016787 F hydrolase activity
GO:0030975 F thiamine binding
GO:0036172 P thiamine salvage
GO:0044715 F 8-oxo-dGDP phosphatase activity
2676 O_BomoN4EE12409_complete:A_BomoN4EE_TR30100_c2_g2_i3
126bp
 PREDICTED:_thiamin_pyrophosphokinase_1_isoform_X2_[Amyelois_transitella]
GO:0000166 F nucleotide binding
GO:0004788 F thiamine diphosphokinase activity
GO:0005524 F ATP binding
GO:0006772 P thiamine metabolic process
GO:0009229 P thiamine diphosphate biosynthetic process
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0030975 F thiamine binding
2677 O_BomoN4EE1240_complete:A_BomoN4EE_TR17141_c0_g1_i1
223bp
 SoxE_[Bombyx_mori]
GO:0000981 F DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0003170 P heart valve development
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0048709 P oligodendrocyte differentiation
2678 O_BomoN4EE12410_complete:A_BomoN4EE_TR30100_c2_g2_i4
140bp
 PREDICTED:_thiamin_pyrophosphokinase_1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004788 F thiamine diphosphokinase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006772 P thiamine metabolic process
GO:0009228 P thiamine biosynthetic process
GO:0009229 P thiamine diphosphate biosynthetic process
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0016787 F hydrolase activity
GO:0030975 F thiamine binding
GO:0036172 P thiamine salvage
GO:0044715 F 8-oxo-dGDP phosphatase activity
2679 O_BomoN4EE12411_complete:A_BomoN4EE_TR30100_c2_g2_i4
126bp
 PREDICTED:_thiamin_pyrophosphokinase_1_isoform_X2_[Amyelois_transitella]
GO:0000166 F nucleotide binding
GO:0004788 F thiamine diphosphokinase activity
GO:0005524 F ATP binding
GO:0006772 P thiamine metabolic process
GO:0009229 P thiamine diphosphate biosynthetic process
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0030975 F thiamine binding
2680 O_BomoN4EE12412_complete:A_BomoN4EE_TR30100_c2_g2_i5
140bp
 PREDICTED:_thiamin_pyrophosphokinase_1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004788 F thiamine diphosphokinase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006772 P thiamine metabolic process
GO:0009228 P thiamine biosynthetic process
GO:0009229 P thiamine diphosphate biosynthetic process
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0016787 F hydrolase activity
GO:0030975 F thiamine binding
GO:0036172 P thiamine salvage
GO:0044715 F 8-oxo-dGDP phosphatase activity
2681 O_BomoN4EE12413_complete:A_BomoN4EE_TR30100_c2_g2_i6
140bp
 PREDICTED:_thiamin_pyrophosphokinase_1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004788 F thiamine diphosphokinase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006772 P thiamine metabolic process
GO:0009228 P thiamine biosynthetic process
GO:0009229 P thiamine diphosphate biosynthetic process
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0016787 F hydrolase activity
GO:0030975 F thiamine binding
GO:0036172 P thiamine salvage
GO:0044715 F 8-oxo-dGDP phosphatase activity
2682 O_BomoN4EE12414_complete:A_BomoN4EE_TR30100_c2_g2_i7
153bp
 PREDICTED:_thiamin_pyrophosphokinase_1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004788 F thiamine diphosphokinase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006772 P thiamine metabolic process
GO:0009228 P thiamine biosynthetic process
GO:0009229 P thiamine diphosphate biosynthetic process
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0016787 F hydrolase activity
GO:0030975 F thiamine binding
GO:0036172 P thiamine salvage
GO:0044715 F 8-oxo-dGDP phosphatase activity
2683 O_BomoN4EE12415_complete:A_BomoN4EE_TR30101_c1_g2_i1
401bp
 PREDICTED:_WD_repeat-containing_protein_55_homolog_[Amyelois_transitella]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
2684 O_BomoN4EE12416_complete:A_BomoN4EE_TR30101_c1_g2_i1
380bp
 PREDICTED:_protein-O-fucosyltransferase_1_isoform_X1_[Bombyx_mori]
GO:0005112 F Notch binding
GO:0005737 C cytoplasm
GO:0005783 C endoplasmic reticulum
GO:0005794 C Golgi apparatus
GO:0005975 P carbohydrate metabolic process
GO:0006004 P fucose metabolic process
GO:0006355 P regulation of transcription, DNA-templated
GO:0006486 P protein glycosylation
GO:0006493 P protein O-linked glycosylation
GO:0006897 P endocytosis
GO:0007219 P Notch signaling pathway
GO:0007399 P nervous system development
GO:0008417 F fucosyltransferase activity
GO:0008593 P regulation of Notch signaling pathway
GO:0009790 P embryo development
GO:0016266 P O-glycan processing
GO:0016337 P cell-cell adhesion
GO:0016740 F transferase activity
GO:0016757 F glycosyltransferase activity
GO:0030163 P protein catabolic process
GO:0031410 C cytoplasmic vesicle
GO:0036065 P fucosylation
GO:0036066 P protein O-linked fucosylation
GO:0045746 P negative regulation of Notch signaling pathway
GO:0045747 P positive regulation of Notch signaling pathway
GO:0046331 P lateral inhibition
GO:0046922 F peptide-O-fucosyltransferase activity
2685 O_BomoN4EE12417_complete:A_BomoN4EE_TR30101_c1_g2_i2
401bp
 PREDICTED:_WD_repeat-containing_protein_55_homolog_[Amyelois_transitella]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
2686 O_BomoN4EE12418_complete:A_BomoN4EE_TR30101_c1_g2_i2
380bp
 PREDICTED:_protein-O-fucosyltransferase_1_isoform_X1_[Bombyx_mori]
GO:0005112 F Notch binding
GO:0005737 C cytoplasm
GO:0005783 C endoplasmic reticulum
GO:0005794 C Golgi apparatus
GO:0005975 P carbohydrate metabolic process
GO:0006004 P fucose metabolic process
GO:0006355 P regulation of transcription, DNA-templated
GO:0006486 P protein glycosylation
GO:0006493 P protein O-linked glycosylation
GO:0006897 P endocytosis
GO:0007219 P Notch signaling pathway
GO:0007399 P nervous system development
GO:0008417 F fucosyltransferase activity
GO:0008593 P regulation of Notch signaling pathway
GO:0009790 P embryo development
GO:0016266 P O-glycan processing
GO:0016337 P cell-cell adhesion
GO:0016740 F transferase activity
GO:0016757 F glycosyltransferase activity
GO:0030163 P protein catabolic process
GO:0031410 C cytoplasmic vesicle
GO:0036065 P fucosylation
GO:0036066 P protein O-linked fucosylation
GO:0045746 P negative regulation of Notch signaling pathway
GO:0045747 P positive regulation of Notch signaling pathway
GO:0046331 P lateral inhibition
GO:0046922 F peptide-O-fucosyltransferase activity
2687 O_BomoN4EE12419_complete:A_BomoN4EE_TR30101_c1_g3_i1
380bp
 PREDICTED:_protein-O-fucosyltransferase_1_isoform_X1_[Bombyx_mori]
GO:0005112 F Notch binding
GO:0005737 C cytoplasm
GO:0005783 C endoplasmic reticulum
GO:0005794 C Golgi apparatus
GO:0005975 P carbohydrate metabolic process
GO:0006004 P fucose metabolic process
GO:0006355 P regulation of transcription, DNA-templated
GO:0006486 P protein glycosylation
GO:0006493 P protein O-linked glycosylation
GO:0006897 P endocytosis
GO:0007219 P Notch signaling pathway
GO:0007399 P nervous system development
GO:0008417 F fucosyltransferase activity
GO:0008593 P regulation of Notch signaling pathway
GO:0009790 P embryo development
GO:0016266 P O-glycan processing
GO:0016337 P cell-cell adhesion
GO:0016740 F transferase activity
GO:0016757 F glycosyltransferase activity
GO:0030163 P protein catabolic process
GO:0031410 C cytoplasmic vesicle
GO:0036065 P fucosylation
GO:0036066 P protein O-linked fucosylation
GO:0045746 P negative regulation of Notch signaling pathway
GO:0045747 P positive regulation of Notch signaling pathway
GO:0046331 P lateral inhibition
GO:0046922 F peptide-O-fucosyltransferase activity
2688 O_BomoN4EE1241_internal:A_BomoN4EE_TR17146_c0_g1_i1
141bp
 PREDICTED:_solute_carrier_family_22_member_13-like_[Papilio_xuthus]
GO:0005452 F inorganic anion exchanger activity
GO:0005887 C integral component of plasma membrane
GO:0006810 P transport
GO:0006811 P ion transport
GO:0015347 F sodium-independent organic anion transmembrane transporter activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0043252 P sodium-independent organic anion transport
GO:0055085 P transmembrane transport
GO:0098656 P anion transmembrane transport
2689 O_BomoN4EE12420_complete:A_BomoN4EE_TR30101_c1_g4_i1
380bp
 PREDICTED:_protein-O-fucosyltransferase_1_isoform_X1_[Bombyx_mori]
GO:0005112 F Notch binding
GO:0005737 C cytoplasm
GO:0005783 C endoplasmic reticulum
GO:0005794 C Golgi apparatus
GO:0005975 P carbohydrate metabolic process
GO:0006004 P fucose metabolic process
GO:0006355 P regulation of transcription, DNA-templated
GO:0006486 P protein glycosylation
GO:0006493 P protein O-linked glycosylation
GO:0006897 P endocytosis
GO:0007219 P Notch signaling pathway
GO:0007399 P nervous system development
GO:0008417 F fucosyltransferase activity
GO:0008593 P regulation of Notch signaling pathway
GO:0009790 P embryo development
GO:0016266 P O-glycan processing
GO:0016337 P cell-cell adhesion
GO:0016740 F transferase activity
GO:0016757 F glycosyltransferase activity
GO:0030163 P protein catabolic process
GO:0031410 C cytoplasmic vesicle
GO:0036065 P fucosylation
GO:0036066 P protein O-linked fucosylation
GO:0045746 P negative regulation of Notch signaling pathway
GO:0045747 P positive regulation of Notch signaling pathway
GO:0046331 P lateral inhibition
GO:0046922 F peptide-O-fucosyltransferase activity
2690 O_BomoN4EE12421_complete:A_BomoN4EE_TR30102_c0_g1_i1
163bp
 PREDICTED:_uncharacterized_protein_LOC106718167_[Papilio_machaon]
GO:0000245 P spliceosomal complex assembly
GO:0000387 P spliceosomal snRNP assembly
GO:0000398 P mRNA splicing, via spliceosome
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0016604 C nuclear body
GO:0032797 C SMN complex
GO:0034719 C SMN-Sm protein complex
GO:0051170 P import into nucleus
GO:0097504 C Gemini of coiled bodies
2691 O_BomoN4EE12422_internal:A_BomoN4EE_TR30102_c2_g1_i2
144bp
2692 O_BomoN4EE12423_5prime_partial:A_BomoN4EE_TR30102_c2_g1_i2
113bp
 PREDICTED:_DNA_repair_protein_XRCC1_isoform_X3_[Bombyx_mori]
2693 O_BomoN4EE12424_5prime_partial:A_BomoN4EE_TR30102_c2_g1_i2
107bp
2694 O_BomoN4EE12425_5prime_partial:A_BomoN4EE_TR30102_c2_g1_i4
149bp
 PREDICTED:_DNA_repair_protein_XRCC1_isoform_X2_[Bombyx_mori]
2695 O_BomoN4EE12426_3prime_partial:A_BomoN4EE_TR30102_c2_g1_i4
140bp
2696 O_BomoN4EE12427_complete:A_BomoN4EE_TR30102_c2_g2_i1
440bp
 PREDICTED:_DNA_repair_protein_XRCC1_isoform_X2_[Bombyx_mori]
GO:0000012 P single strand break repair
GO:0003684 F damaged DNA binding
GO:0005634 C nucleus
GO:0005739 C mitochondrion
GO:0006281 P DNA repair
GO:0006974 P cellular response to DNA damage stimulus
2697 O_BomoN4EE12428_complete:A_BomoN4EE_TR30102_c2_g2_i2
294bp
 PREDICTED:_DNA_repair_protein_XRCC1_isoform_X3_[Bombyx_mori]
GO:0000012 P single strand break repair
GO:0000724 P double-strand break repair via homologous recombination
GO:0001666 P response to hypoxia
GO:0003684 F damaged DNA binding
GO:0003909 F DNA ligase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0006281 P DNA repair
GO:0006283 P transcription-coupled nucleotide-excision repair
GO:0006284 P base-excision repair
GO:0006288 P base-excision repair, DNA ligation
GO:0006297 P nucleotide-excision repair, DNA gap filling
GO:0006974 P cellular response to DNA damage stimulus
GO:0010033 P response to organic substance
GO:0019899 F enzyme binding
GO:0042493 P response to xenobiotic stimulus
2698 O_BomoN4EE12429_complete:A_BomoN4EE_TR30102_c2_g2_i3
294bp
 PREDICTED:_DNA_repair_protein_XRCC1_isoform_X3_[Bombyx_mori]
GO:0000012 P single strand break repair
GO:0000724 P double-strand break repair via homologous recombination
GO:0001666 P response to hypoxia
GO:0003684 F damaged DNA binding
GO:0003909 F DNA ligase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0006281 P DNA repair
GO:0006283 P transcription-coupled nucleotide-excision repair
GO:0006284 P base-excision repair
GO:0006288 P base-excision repair, DNA ligation
GO:0006297 P nucleotide-excision repair, DNA gap filling
GO:0006974 P cellular response to DNA damage stimulus
GO:0010033 P response to organic substance
GO:0019899 F enzyme binding
GO:0042493 P response to xenobiotic stimulus
2699 O_BomoN4EE1242_internal:A_BomoN4EE_TR17215_c0_g1_i1
137bp
2700 O_BomoN4EE12430_complete:A_BomoN4EE_TR30102_c2_g2_i4
294bp
 PREDICTED:_DNA_repair_protein_XRCC1_isoform_X3_[Bombyx_mori]
GO:0000012 P single strand break repair
GO:0000724 P double-strand break repair via homologous recombination
GO:0001666 P response to hypoxia
GO:0003684 F damaged DNA binding
GO:0003909 F DNA ligase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0006281 P DNA repair
GO:0006283 P transcription-coupled nucleotide-excision repair
GO:0006284 P base-excision repair
GO:0006288 P base-excision repair, DNA ligation
GO:0006297 P nucleotide-excision repair, DNA gap filling
GO:0006974 P cellular response to DNA damage stimulus
GO:0010033 P response to organic substance
GO:0019899 F enzyme binding
GO:0042493 P response to xenobiotic stimulus
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