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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
2551 O_BomoN4EE12297_complete:A_BomoN4EE_TR30087_c0_g1_i2
178bp
 Calcium_uptake_protein,_mitochondrial_[Operophtera_brumata]
GO:0005509 F calcium ion binding
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0005758 C mitochondrial intermembrane space
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006816 P calcium ion transport
GO:0006851 P mitochondrial calcium ion transmembrane transport
GO:0016020 C membrane
GO:0032592 C integral component of mitochondrial membrane
GO:0046872 F metal ion binding
GO:0051560 P mitochondrial calcium ion homeostasis
GO:0051561 P positive regulation of mitochondrial calcium ion concentration
GO:0070509 P calcium ion import
GO:1990246 C uniplex complex
2552 O_BomoN4EE12298_complete:A_BomoN4EE_TR30087_c0_g1_i3
403bp
 PREDICTED:_calcium_uptake_protein_1,_mitochondrial-like_[Amyelois_transitella]
GO:0005509 F calcium ion binding
GO:0005739 C mitochondrion
GO:0005758 C mitochondrial intermembrane space
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006816 P calcium ion transport
GO:0046872 F metal ion binding
GO:0051561 P positive regulation of mitochondrial calcium ion concentration
2553 O_BomoN4EE12299_complete:A_BomoN4EE_TR30087_c0_g1_i4
356bp
 PREDICTED:_calcium_uptake_protein_1,_mitochondrial-like_[Amyelois_transitella]
GO:0005509 F calcium ion binding
GO:0005739 C mitochondrion
GO:0005758 C mitochondrial intermembrane space
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006816 P calcium ion transport
GO:0046872 F metal ion binding
GO:0051561 P positive regulation of mitochondrial calcium ion concentration
2554 O_BomoN4EE1229_5prime_partial:A_BomoN4EE_TR17098_c0_g1_i1
476bp
 PREDICTED:_uncharacterized_protein_LOC106119200_isoform_X1_[Papilio_xuthus]
GO:0005886 C plasma membrane
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030246 F carbohydrate binding
2555 O_BomoN4EE122_3prime_partial:A_BomoN4EE_TR1970_c0_g1_i1
104bp
2556 O_BomoN4EE12300_complete:A_BomoN4EE_TR30087_c0_g1_i6
128bp
 PREDICTED:_calcium_uptake_protein_1,_mitochondrial-like_isoform_X1_[Papilio_polytes]
2557 O_BomoN4EE12301_3prime_partial:A_BomoN4EE_TR30087_c0_g1_i7
261bp
 Carbohydrate_sulfotransferase_11_[Papilio_xuthus]
GO:0000139 C Golgi membrane
GO:0001537 F N-acetylgalactosamine 4-O-sulfotransferase activity
GO:0002063 P chondrocyte development
GO:0005794 C Golgi apparatus
GO:0005975 P carbohydrate metabolic process
GO:0007585 P respiratory gaseous exchange by respiratory system
GO:0008146 F sulfotransferase activity
GO:0009791 P post-embryonic development
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016051 P carbohydrate biosynthetic process
GO:0016740 F transferase activity
GO:0030204 P chondroitin sulfate metabolic process
GO:0030206 P chondroitin sulfate biosynthetic process
GO:0030326 P embryonic limb morphogenesis
GO:0030512 P negative regulation of transforming growth factor beta receptor signaling pathway
GO:0033037 P polysaccharide localization
GO:0036342 P post-anal tail morphogenesis
GO:0042127 P regulation of cell population proliferation
GO:0042733 P embryonic digit morphogenesis
GO:0043066 P negative regulation of apoptotic process
GO:0047756 F chondroitin 4-sulfotransferase activity
GO:0048589 P developmental growth
GO:0048703 P embryonic viscerocranium morphogenesis
GO:0048704 P embryonic skeletal system morphogenesis
GO:0050659 F N-acetylgalactosamine 4-sulfate 6-O-sulfotransferase activity
GO:0051216 P cartilage development
2558 O_BomoN4EE12302_complete:A_BomoN4EE_TR30087_c0_g1_i7
248bp
 Calcium_uptake_protein_1-like,_mitochondrial_[Papilio_machaon]
GO:0005509 F calcium ion binding
GO:0005739 C mitochondrion
GO:0005758 C mitochondrial intermembrane space
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006816 P calcium ion transport
GO:0046872 F metal ion binding
GO:0051561 P positive regulation of mitochondrial calcium ion concentration
2559 O_BomoN4EE12303_complete:A_BomoN4EE_TR30087_c0_g1_i8
248bp
 Calcium_uptake_protein_1-like,_mitochondrial_[Papilio_machaon]
GO:0005509 F calcium ion binding
GO:0005739 C mitochondrion
GO:0005758 C mitochondrial intermembrane space
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006816 P calcium ion transport
GO:0046872 F metal ion binding
GO:0051561 P positive regulation of mitochondrial calcium ion concentration
2560 O_BomoN4EE12304_complete:A_BomoN4EE_TR30087_c0_g1_i8
100bp
 PREDICTED:_calcium_uptake_protein_1,_mitochondrial-like_[Amyelois_transitella]
GO:0005509 F calcium ion binding
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0005758 C mitochondrial intermembrane space
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006816 P calcium ion transport
GO:0006851 P mitochondrial calcium ion transmembrane transport
GO:0016020 C membrane
GO:0032592 C integral component of mitochondrial membrane
GO:0046872 F metal ion binding
GO:0051560 P mitochondrial calcium ion homeostasis
GO:0051561 P positive regulation of mitochondrial calcium ion concentration
GO:0070509 P calcium ion import
GO:1990246 C uniplex complex
2561 O_BomoN4EE12305_internal:A_BomoN4EE_TR30087_c0_g2_i1
170bp
 chondroitin_4-sulfotransferase_[Danaus_plexippus]
GO:0000139 C Golgi membrane
GO:0001537 F N-acetylgalactosamine 4-O-sulfotransferase activity
GO:0002063 P chondrocyte development
GO:0005794 C Golgi apparatus
GO:0005975 P carbohydrate metabolic process
GO:0007585 P respiratory gaseous exchange by respiratory system
GO:0008146 F sulfotransferase activity
GO:0009791 P post-embryonic development
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016051 P carbohydrate biosynthetic process
GO:0016740 F transferase activity
GO:0030204 P chondroitin sulfate metabolic process
GO:0030206 P chondroitin sulfate biosynthetic process
GO:0030326 P embryonic limb morphogenesis
GO:0030512 P negative regulation of transforming growth factor beta receptor signaling pathway
GO:0033037 P polysaccharide localization
GO:0036342 P post-anal tail morphogenesis
GO:0042127 P regulation of cell population proliferation
GO:0042733 P embryonic digit morphogenesis
GO:0043066 P negative regulation of apoptotic process
GO:0047756 F chondroitin 4-sulfotransferase activity
GO:0048589 P developmental growth
GO:0048703 P embryonic viscerocranium morphogenesis
GO:0048704 P embryonic skeletal system morphogenesis
GO:0050659 F N-acetylgalactosamine 4-sulfate 6-O-sulfotransferase activity
GO:0051216 P cartilage development
2562 O_BomoN4EE12306_complete:A_BomoN4EE_TR30088_c0_g1_i1
594bp
 Breast_cancer_type_2_susceptibility_protein-like_[Papilio_xuthus]
GO:0000724 P double-strand break repair via homologous recombination
GO:0000910 P cytokinesis
GO:0003677 F DNA binding
GO:0003697 F single-stranded DNA binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0005815 C microtubule organizing center
GO:0005856 C cytoskeleton
GO:0006281 P DNA repair
GO:0006289 P nucleotide-excision repair
GO:0006302 P double-strand break repair
GO:0006310 P DNA recombination
GO:0006355 P regulation of transcription, DNA-templated
GO:0006974 P cellular response to DNA damage stimulus
GO:0030141 C secretory granule
GO:0033593 C BRCA2-MAGE-D1 complex
GO:0033600 P negative regulation of mammary gland epithelial cell proliferation
GO:0042127 P regulation of cell population proliferation
GO:0043015 F gamma-tubulin binding
GO:0043234 C protein-containing complex
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0051276 P chromosome organization
GO:0051298 P centrosome duplication
2563 O_BomoN4EE12307_complete:A_BomoN4EE_TR30088_c0_g1_i1
107bp
2564 O_BomoN4EE12308_complete:A_BomoN4EE_TR30088_c0_g1_i1
107bp
2565 O_BomoN4EE12309_5prime_partial:A_BomoN4EE_TR30088_c0_g1_i2
108bp
2566 O_BomoN4EE1230_complete:A_BomoN4EE_TR17098_c0_g1_i1
107bp
2567 O_BomoN4EE12310_complete:A_BomoN4EE_TR30088_c0_g1_i2
107bp
2568 O_BomoN4EE12311_complete:A_BomoN4EE_TR30088_c0_g1_i3
450bp
 Breast_cancer_type_2_susceptibility_protein-like_[Papilio_xuthus]
GO:0000724 P double-strand break repair via homologous recombination
GO:0000910 P cytokinesis
GO:0003677 F DNA binding
GO:0003697 F single-stranded DNA binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0005815 C microtubule organizing center
GO:0005856 C cytoskeleton
GO:0006281 P DNA repair
GO:0006289 P nucleotide-excision repair
GO:0006302 P double-strand break repair
GO:0006310 P DNA recombination
GO:0006355 P regulation of transcription, DNA-templated
GO:0006974 P cellular response to DNA damage stimulus
GO:0030141 C secretory granule
GO:0033593 C BRCA2-MAGE-D1 complex
GO:0033600 P negative regulation of mammary gland epithelial cell proliferation
GO:0042127 P regulation of cell population proliferation
GO:0043015 F gamma-tubulin binding
GO:0043234 C protein-containing complex
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0051276 P chromosome organization
GO:0051298 P centrosome duplication
2569 O_BomoN4EE12312_complete:A_BomoN4EE_TR30088_c0_g1_i3
107bp
2570 O_BomoN4EE12313_complete:A_BomoN4EE_TR30088_c0_g1_i4
1436bp
 PREDICTED:_uncharacterized_protein_LOC105842293_[Bombyx_mori]
GO:0000724 P double-strand break repair via homologous recombination
GO:0003677 F DNA binding
GO:0003697 F single-stranded DNA binding
GO:0005515 F protein binding
GO:0005575 C cellular_component
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0005815 C microtubule organizing center
GO:0005856 C cytoskeleton
GO:0006281 P DNA repair
GO:0006310 P DNA recombination
GO:0006355 P regulation of transcription, DNA-templated
GO:0006974 P cellular response to DNA damage stimulus
GO:0007049 P cell cycle
GO:0007283 P spermatogenesis
GO:0007584 P response to nutrient
GO:0030879 P mammary gland development
GO:0031619 P homologous chromosome orientation involved in meiotic metaphase I plate congression
GO:0032355 P response to estradiol
GO:0035264 P multicellular organism growth
GO:0042127 P regulation of cell population proliferation
GO:0043015 F gamma-tubulin binding
GO:0051276 P chromosome organization
GO:0051298 P centrosome duplication
2571 O_BomoN4EE12314_complete:A_BomoN4EE_TR30088_c0_g1_i4
162bp
2572 O_BomoN4EE12315_complete:A_BomoN4EE_TR30088_c0_g1_i4
129bp
2573 O_BomoN4EE12316_complete:A_BomoN4EE_TR30088_c0_g1_i4
107bp
2574 O_BomoN4EE12317_complete:A_BomoN4EE_TR30088_c0_g1_i5
1226bp
 PREDICTED:_breast_cancer_type_2_susceptibility_protein_homolog_[Amyelois_transitella]
GO:0000724 P double-strand break repair via homologous recombination
GO:0000910 P cytokinesis
GO:0003677 F DNA binding
GO:0003697 F single-stranded DNA binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0005815 C microtubule organizing center
GO:0005856 C cytoskeleton
GO:0006281 P DNA repair
GO:0006289 P nucleotide-excision repair
GO:0006302 P double-strand break repair
GO:0006310 P DNA recombination
GO:0006355 P regulation of transcription, DNA-templated
GO:0006974 P cellular response to DNA damage stimulus
GO:0030141 C secretory granule
GO:0033593 C BRCA2-MAGE-D1 complex
GO:0033600 P negative regulation of mammary gland epithelial cell proliferation
GO:0042127 P regulation of cell population proliferation
GO:0043015 F gamma-tubulin binding
GO:0043234 C protein-containing complex
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0051276 P chromosome organization
GO:0051298 P centrosome duplication
2575 O_BomoN4EE12318_complete:A_BomoN4EE_TR30088_c0_g1_i5
465bp
 PREDICTED:_uncharacterized_protein_LOC105842293_[Bombyx_mori]
2576 O_BomoN4EE12319_complete:A_BomoN4EE_TR30088_c0_g1_i5
162bp
2577 O_BomoN4EE1231_complete:A_BomoN4EE_TR17099_c0_g1_i1
104bp
 histone_1_[Culex_quinquefasciatus]
GO:0000786 C nucleosome
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0006334 P nucleosome assembly
GO:0006352 P DNA-templated transcription, initiation
GO:0046982 F protein heterodimerization activity
2578 O_BomoN4EE12320_complete:A_BomoN4EE_TR30088_c0_g1_i5
129bp
2579 O_BomoN4EE12321_complete:A_BomoN4EE_TR30088_c0_g1_i5
107bp
2580 O_BomoN4EE12322_complete:A_BomoN4EE_TR30088_c0_g1_i5
107bp
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