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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
2521 O_BomoN4EE1226_internal:A_BomoN4EE_TR17083_c0_g1_i1
136bp
 ionotropic_GABA-aminobutyric_acid_receptor_RLD1-3b6b_[Bombyx_mori]
GO:0004890 F GABA-A receptor activity
GO:0005216 F ion channel activity
GO:0005230 F extracellular ligand-gated ion channel activity
GO:0005254 F chloride channel activity
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006821 P chloride transport
GO:0007165 P signal transduction
GO:0007268 P chemical synaptic transmission
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030054 C cell junction
GO:0030594 F neurotransmitter receptor activity
GO:0034220 P ion transmembrane transport
GO:0034707 C chloride channel complex
GO:0045202 C synapse
GO:0045211 C postsynaptic membrane
GO:0099565 P chemical synaptic transmission, postsynaptic
GO:1902476 P chloride transmembrane transport
2522 O_BomoN4EE12270_complete:A_BomoN4EE_TR30082_c0_g2_i3
391bp
 PREDICTED:_LOW_QUALITY_PROTEIN:_uncharacterized_protein_LOC101743043_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005741 C mitochondrial outer membrane
GO:0005776 C autophagosome
GO:0005829 C cytosol
GO:0005930 C axoneme
GO:0006914 P autophagy
GO:0007275 P multicellular organism development
GO:0007399 P nervous system development
GO:0008285 P negative regulation of cell population proliferation
GO:0016236 P macroautophagy
GO:0021915 P neural tube development
GO:0030154 P cell differentiation
GO:0031410 C cytoplasmic vesicle
GO:0031625 F ubiquitin protein ligase binding
GO:0043524 P negative regulation of neuron apoptotic process
GO:0043552 P positive regulation of phosphatidylinositol 3-kinase activity
GO:0045335 C phagocytic vesicle
GO:0048471 C perinuclear region of cytoplasm
GO:0061734 P parkin-mediated stimulation of mitophagy in response to mitochondrial depolarization
GO:0098779 P positive regulation of mitophagy in response to mitochondrial depolarization
GO:1903599 P positive regulation of autophagy of mitochondrion
GO:2000785 P regulation of autophagosome assembly
2523 O_BomoN4EE12271_5prime_partial:A_BomoN4EE_TR30083_c0_g3_i1
303bp
 PREDICTED:_serine/threonine-protein_kinase_BRSK2_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000287 F magnesium ion binding
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0005815 C microtubule organizing center
GO:0005856 C cytoskeleton
GO:0006468 P protein phosphorylation
GO:0006974 P cellular response to DNA damage stimulus
GO:0007049 P cell cycle
GO:0007269 P neurotransmitter secretion
GO:0007399 P nervous system development
GO:0007409 P axonogenesis
GO:0008021 C synaptic vesicle
GO:0009411 P response to UV
GO:0010212 P response to ionizing radiation
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0019901 F protein kinase binding
GO:0030010 P establishment of cell polarity
GO:0030054 C cell junction
GO:0030182 P neuron differentiation
GO:0031572 P mitotic G2 DNA damage checkpoint signaling
GO:0035556 P intracellular signal transduction
GO:0043015 F gamma-tubulin binding
GO:0045202 C synapse
GO:0046872 F metal ion binding
GO:0048812 P neuron projection morphogenesis
GO:0050321 F tau-protein kinase activity
GO:0051298 P centrosome duplication
2524 O_BomoN4EE12272_complete:A_BomoN4EE_TR30083_c0_g3_i1
110bp
2525 O_BomoN4EE12273_complete:A_BomoN4EE_TR30083_c0_g4_i3
122bp
 PREDICTED:_uncharacterized_protein_LOC105842298_isoform_X1_[Bombyx_mori]
2526 O_BomoN4EE12274_5prime_partial:A_BomoN4EE_TR30083_c0_g4_i5
460bp
 putative_BR_serine/threonine-protein_kinase_[Danaus_plexippus]
GO:0000086 P G2/M transition of mitotic cell cycle
GO:0000166 F nucleotide binding
GO:0000287 F magnesium ion binding
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005783 C endoplasmic reticulum
GO:0005813 C centrosome
GO:0005815 C microtubule organizing center
GO:0005856 C cytoskeleton
GO:0006468 P protein phosphorylation
GO:0006887 P exocytosis
GO:0006915 P apoptotic process
GO:0007049 P cell cycle
GO:0007067 P mitotic cell cycle
GO:0007399 P nervous system development
GO:0007409 P axonogenesis
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0018105 P peptidyl-serine phosphorylation
GO:0019901 F protein kinase binding
GO:0030010 P establishment of cell polarity
GO:0030182 P neuron differentiation
GO:0031532 P actin cytoskeleton reorganization
GO:0036503 P ERAD pathway
GO:0043462 P regulation of ATP-dependent activity
GO:0046872 F metal ion binding
GO:0048471 C perinuclear region of cytoplasm
GO:0048812 P neuron projection morphogenesis
GO:0050321 F tau-protein kinase activity
GO:0051117 F ATPase binding
GO:0051301 P cell division
GO:0060590 F ATPase regulator activity
GO:0061178 P regulation of insulin secretion involved in cellular response to glucose stimulus
GO:0070059 P intrinsic apoptotic signaling pathway in response to endoplasmic reticulum stress
GO:1904152 P regulation of retrograde protein transport, ER to cytosol
2527 O_BomoN4EE12275_complete:A_BomoN4EE_TR30083_c0_g4_i5
125bp
2528 O_BomoN4EE12276_complete:A_BomoN4EE_TR30083_c0_g4_i5
110bp
2529 O_BomoN4EE12277_5prime_partial:A_BomoN4EE_TR30083_c0_g4_i6
158bp
 PREDICTED:_uncharacterized_protein_LOC105842298_isoform_X1_[Bombyx_mori]
2530 O_BomoN4EE12278_3prime_partial:A_BomoN4EE_TR30083_c0_g4_i6
139bp
2531 O_BomoN4EE12279_5prime_partial:A_BomoN4EE_TR30083_c0_g4_i7
206bp
 PREDICTED:_uncharacterized_protein_LOC105842298_isoform_X1_[Bombyx_mori]
2532 O_BomoN4EE1227_complete:A_BomoN4EE_TR17094_c0_g1_i1
821bp
 PREDICTED:_nuclear_pore_complex_protein_Nup93-like_[Amyelois_transitella]
GO:0005634 C nucleus
GO:0005643 C nuclear pore
GO:0006606 P protein import into nucleus
GO:0006810 P transport
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016973 P poly(A)+ mRNA export from nucleus
GO:0017056 F structural constituent of nuclear pore
GO:0031965 C nuclear membrane
GO:0034399 C nuclear periphery
GO:0051028 P mRNA transport
GO:0051292 P nuclear pore complex assembly
2533 O_BomoN4EE12280_3prime_partial:A_BomoN4EE_TR30083_c0_g4_i7
139bp
2534 O_BomoN4EE12281_5prime_partial:A_BomoN4EE_TR30083_c0_g4_i8
508bp
 putative_BR_serine/threonine-protein_kinase_[Danaus_plexippus]
GO:0000086 P G2/M transition of mitotic cell cycle
GO:0000166 F nucleotide binding
GO:0000287 F magnesium ion binding
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005783 C endoplasmic reticulum
GO:0005813 C centrosome
GO:0005815 C microtubule organizing center
GO:0005856 C cytoskeleton
GO:0006468 P protein phosphorylation
GO:0006887 P exocytosis
GO:0006915 P apoptotic process
GO:0007049 P cell cycle
GO:0007067 P mitotic cell cycle
GO:0007399 P nervous system development
GO:0007409 P axonogenesis
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0018105 P peptidyl-serine phosphorylation
GO:0019901 F protein kinase binding
GO:0030010 P establishment of cell polarity
GO:0030182 P neuron differentiation
GO:0031532 P actin cytoskeleton reorganization
GO:0036503 P ERAD pathway
GO:0043462 P regulation of ATP-dependent activity
GO:0046872 F metal ion binding
GO:0048471 C perinuclear region of cytoplasm
GO:0048812 P neuron projection morphogenesis
GO:0050321 F tau-protein kinase activity
GO:0051117 F ATPase binding
GO:0051301 P cell division
GO:0060590 F ATPase regulator activity
GO:0061178 P regulation of insulin secretion involved in cellular response to glucose stimulus
GO:0070059 P intrinsic apoptotic signaling pathway in response to endoplasmic reticulum stress
GO:1904152 P regulation of retrograde protein transport, ER to cytosol
2535 O_BomoN4EE12282_complete:A_BomoN4EE_TR30083_c0_g4_i8
125bp
2536 O_BomoN4EE12283_complete:A_BomoN4EE_TR30083_c0_g4_i8
110bp
2537 O_BomoN4EE12284_complete:A_BomoN4EE_TR30085_c0_g2_i1
1361bp
 PREDICTED:_WD_repeat-containing_protein_19_isoform_X3_[Bombyx_mori]
GO:0000902 P cell morphogenesis
GO:0001701 P in utero embryonic development
GO:0003674 F molecular_function
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0005929 C cilium
GO:0007224 P smoothened signaling pathway
GO:0008406 P gonad development
GO:0030030 P cell projection organization
GO:0030326 P embryonic limb morphogenesis
GO:0030991 C intraciliary transport particle A
GO:0031076 P embryonic camera-type eye development
GO:0031513 C non-motile cilium
GO:0031514 C motile cilium
GO:0032391 C photoreceptor connecting cilium
GO:0035721 P intraciliary retrograde transport
GO:0042384 P cilium assembly
GO:0042471 P ear morphogenesis
GO:0042995 C cell projection
GO:0048701 P embryonic cranial skeleton morphogenesis
GO:0050877 P nervous system process
GO:0055123 P digestive system development
GO:0060271 P cilium assembly
GO:0060830 P ciliary receptor clustering involved in smoothened signaling pathway
GO:0060831 P smoothened signaling pathway involved in dorsal/ventral neural tube patterning
GO:0061055 P myotome development
GO:0061512 P protein localization to cilium
2538 O_BomoN4EE12285_complete:A_BomoN4EE_TR30085_c0_g2_i1
108bp
2539 O_BomoN4EE12286_complete:A_BomoN4EE_TR30085_c0_g2_i1
103bp
2540 O_BomoN4EE12287_complete:A_BomoN4EE_TR30085_c0_g3_i1
397bp
 PREDICTED:_WD_repeat-containing_protein_19_[Amyelois_transitella]
GO:0000902 P cell morphogenesis
GO:0001701 P in utero embryonic development
GO:0003674 F molecular_function
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0005929 C cilium
GO:0007224 P smoothened signaling pathway
GO:0008406 P gonad development
GO:0030030 P cell projection organization
GO:0030326 P embryonic limb morphogenesis
GO:0030991 C intraciliary transport particle A
GO:0031076 P embryonic camera-type eye development
GO:0031513 C non-motile cilium
GO:0031514 C motile cilium
GO:0032391 C photoreceptor connecting cilium
GO:0035721 P intraciliary retrograde transport
GO:0042384 P cilium assembly
GO:0042471 P ear morphogenesis
GO:0042995 C cell projection
GO:0048701 P embryonic cranial skeleton morphogenesis
GO:0050877 P nervous system process
GO:0055123 P digestive system development
GO:0060271 P cilium assembly
GO:0060830 P ciliary receptor clustering involved in smoothened signaling pathway
GO:0060831 P smoothened signaling pathway involved in dorsal/ventral neural tube patterning
GO:0061055 P myotome development
GO:0061512 P protein localization to cilium
2541 O_BomoN4EE12288_complete:A_BomoN4EE_TR30086_c0_g1_i2
722bp
 glycerol-3-phosphate_dehydrogenase_isoform_2_[Bombyx_mori]
GO:0004368 F glycerol-3-phosphate dehydrogenase (quinone) activity
GO:0005509 F calcium ion binding
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0006072 P glycerol-3-phosphate metabolic process
GO:0006094 P gluconeogenesis
GO:0009331 C glycerol-3-phosphate dehydrogenase complex
GO:0016491 F oxidoreductase activity
GO:0019563 P glycerol catabolic process
GO:0035264 P multicellular organism growth
GO:0043010 P camera-type eye development
GO:0044255 P cellular lipid metabolic process
GO:0046872 F metal ion binding
GO:0052590 F sn-glycerol-3-phosphate:ubiquinone oxidoreductase activity
GO:0052591 F sn-glycerol-3-phosphate:ubiquinone-8 oxidoreductase activity
GO:0055114 P obsolete oxidation-reduction process
2542 O_BomoN4EE12289_complete:A_BomoN4EE_TR30086_c0_g1_i2
136bp
2543 O_BomoN4EE1228_complete:A_BomoN4EE_TR17094_c0_g1_i1
135bp
2544 O_BomoN4EE12290_3prime_partial:A_BomoN4EE_TR30086_c0_g1_i3
718bp
 glycerol-3-phosphate_dehydrogenase_isoform_2_[Bombyx_mori]
GO:0004368 F glycerol-3-phosphate dehydrogenase (quinone) activity
GO:0005509 F calcium ion binding
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0006072 P glycerol-3-phosphate metabolic process
GO:0006094 P gluconeogenesis
GO:0009331 C glycerol-3-phosphate dehydrogenase complex
GO:0016491 F oxidoreductase activity
GO:0019563 P glycerol catabolic process
GO:0035264 P multicellular organism growth
GO:0043010 P camera-type eye development
GO:0044255 P cellular lipid metabolic process
GO:0046872 F metal ion binding
GO:0052590 F sn-glycerol-3-phosphate:ubiquinone oxidoreductase activity
GO:0052591 F sn-glycerol-3-phosphate:ubiquinone-8 oxidoreductase activity
GO:0055114 P obsolete oxidation-reduction process
2545 O_BomoN4EE12291_complete:A_BomoN4EE_TR30086_c0_g1_i3
136bp
2546 O_BomoN4EE12292_5prime_partial:A_BomoN4EE_TR30086_c0_g1_i4
107bp
 putative_glycerol-3-phosphate_dehydrogenase,_mitochondrial_[Papilio_machaon]
2547 O_BomoN4EE12293_complete:A_BomoN4EE_TR30086_c0_g2_i1
653bp
 glycerol-3-phosphate_dehydrogenase_isoform_1_[Bombyx_mori]
GO:0004368 F glycerol-3-phosphate dehydrogenase (quinone) activity
GO:0005509 F calcium ion binding
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0006072 P glycerol-3-phosphate metabolic process
GO:0006094 P gluconeogenesis
GO:0009331 C glycerol-3-phosphate dehydrogenase complex
GO:0016491 F oxidoreductase activity
GO:0019563 P glycerol catabolic process
GO:0035264 P multicellular organism growth
GO:0043010 P camera-type eye development
GO:0044255 P cellular lipid metabolic process
GO:0046872 F metal ion binding
GO:0052590 F sn-glycerol-3-phosphate:ubiquinone oxidoreductase activity
GO:0052591 F sn-glycerol-3-phosphate:ubiquinone-8 oxidoreductase activity
GO:0055114 P obsolete oxidation-reduction process
2548 O_BomoN4EE12294_complete:A_BomoN4EE_TR30086_c0_g2_i1
136bp
2549 O_BomoN4EE12295_complete:A_BomoN4EE_TR30087_c0_g1_i1
481bp
 PREDICTED:_calcium_uptake_protein_1,_mitochondrial-like_isoform_X2_[Papilio_polytes]
GO:0005509 F calcium ion binding
GO:0005739 C mitochondrion
GO:0005758 C mitochondrial intermembrane space
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006816 P calcium ion transport
GO:0046872 F metal ion binding
GO:0051561 P positive regulation of mitochondrial calcium ion concentration
2550 O_BomoN4EE12296_complete:A_BomoN4EE_TR30087_c0_g1_i2
248bp
 Calcium_uptake_protein_1-like,_mitochondrial_[Papilio_machaon]
GO:0005509 F calcium ion binding
GO:0005739 C mitochondrion
GO:0005758 C mitochondrial intermembrane space
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006816 P calcium ion transport
GO:0046872 F metal ion binding
GO:0051561 P positive regulation of mitochondrial calcium ion concentration
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