Search ORF from Assembled RNA-Seq

No.	Name Length	Chromosome No./Scaffold Id Scaffold Length	BLAST (vs nr)	Gene ontology
2311	O_BomoN4EE12080_complete:A_BomoN4EE_TR30064_c0_g1_i1 406bp	Bomo_Chr9	PREDICTED:_cycle_like_factor_b_isoform_X1_[Bombyx_mori]	GO:0003677 F DNA binding GO:0003700 F DNA-binding transcription factor activity GO:0005634 C nucleus GO:0005667 C transcription regulator complex GO:0005737 C cytoplasm GO:0006351 P transcription, DNA-templated GO:0006355 P regulation of transcription, DNA-templated GO:0016605 C PML body GO:0045893 P positive regulation of transcription, DNA-templated GO:0046983 F protein dimerization activity GO:0048511 P rhythmic process GO:0051775 P response to redox state
2312	O_BomoN4EE12081_complete:A_BomoN4EE_TR30064_c0_g1_i1 267bp	Bomo_Chr9	PREDICTED:_cycle_like_factor_b_isoform_X2_[Bombyx_mori]	GO:0000122 P negative regulation of transcription by RNA polymerase II GO:0000977 F RNA polymerase II transcription regulatory region sequence-specific DNA binding GO:0003053 P circadian regulation of heart rate GO:0003677 F DNA binding GO:0003700 F DNA-binding transcription factor activity GO:0005515 F protein binding GO:0005634 C nucleus GO:0005667 C transcription regulator complex GO:0005737 C cytoplasm GO:0006351 P transcription, DNA-templated GO:0006355 P regulation of transcription, DNA-templated GO:0007622 P rhythmic behavior GO:0007623 P circadian rhythm GO:0008062 P eclosion rhythm GO:0032922 P circadian regulation of gene expression GO:0042594 P response to starvation GO:0045187 P regulation of circadian sleep/wake cycle, sleep GO:0045475 P locomotor rhythm GO:0045893 P positive regulation of transcription, DNA-templated GO:0045944 P positive regulation of transcription by RNA polymerase II GO:0046982 F protein heterodimerization activity GO:0046983 F protein dimerization activity GO:0048148 P behavioral response to cocaine GO:0048511 P rhythmic process
2313	O_BomoN4EE12082_complete:A_BomoN4EE_TR30064_c0_g1_i1 111bp	Bomo_Chr9	hypothetical_protein_ALC57_18566_[Trachymyrmex_cornetzi]
2314	O_BomoN4EE12083_complete:A_BomoN4EE_TR30064_c0_g1_i2 701bp	Bomo_Chr9	Cycle_like_factor_b_[Bombyx_mori]	GO:0003677 F DNA binding GO:0003700 F DNA-binding transcription factor activity GO:0005634 C nucleus GO:0005667 C transcription regulator complex GO:0005737 C cytoplasm GO:0006351 P transcription, DNA-templated GO:0006355 P regulation of transcription, DNA-templated GO:0042753 P positive regulation of circadian rhythm GO:0045893 P positive regulation of transcription, DNA-templated GO:0046983 F protein dimerization activity GO:0048511 P rhythmic process GO:0070888 F E-box binding
2315	O_BomoN4EE12084_complete:A_BomoN4EE_TR30064_c0_g1_i2 111bp	Bomo_Chr9	hypothetical_protein_ALC57_18566_[Trachymyrmex_cornetzi]
2316	O_BomoN4EE12085_complete:A_BomoN4EE_TR30064_c0_g1_i3 260bp	Bomo_Chr1	PREDICTED:_cycle_like_factor_b_isoform_X1_[Bombyx_mori]	GO:0000122 P negative regulation of transcription by RNA polymerase II GO:0000977 F RNA polymerase II transcription regulatory region sequence-specific DNA binding GO:0003053 P circadian regulation of heart rate GO:0003677 F DNA binding GO:0003700 F DNA-binding transcription factor activity GO:0005515 F protein binding GO:0005634 C nucleus GO:0005667 C transcription regulator complex GO:0005737 C cytoplasm GO:0006351 P transcription, DNA-templated GO:0006355 P regulation of transcription, DNA-templated GO:0007622 P rhythmic behavior GO:0007623 P circadian rhythm GO:0008062 P eclosion rhythm GO:0032922 P circadian regulation of gene expression GO:0042594 P response to starvation GO:0045187 P regulation of circadian sleep/wake cycle, sleep GO:0045475 P locomotor rhythm GO:0045893 P positive regulation of transcription, DNA-templated GO:0045944 P positive regulation of transcription by RNA polymerase II GO:0046982 F protein heterodimerization activity GO:0046983 F protein dimerization activity GO:0048148 P behavioral response to cocaine GO:0048511 P rhythmic process
2317	O_BomoN4EE12086_complete:A_BomoN4EE_TR30064_c0_g1_i4 430bp	Bomo_Chr9	Cycle_like_factor_b_[Bombyx_mori]	GO:0003677 F DNA binding GO:0003700 F DNA-binding transcription factor activity GO:0005634 C nucleus GO:0005667 C transcription regulator complex GO:0005737 C cytoplasm GO:0006351 P transcription, DNA-templated GO:0006355 P regulation of transcription, DNA-templated GO:0016605 C PML body GO:0045893 P positive regulation of transcription, DNA-templated GO:0046983 F protein dimerization activity GO:0048511 P rhythmic process GO:0051775 P response to redox state
2318	O_BomoN4EE12087_complete:A_BomoN4EE_TR30064_c0_g1_i4 111bp	Bomo_Chr9	hypothetical_protein_ALC57_18566_[Trachymyrmex_cornetzi]
2319	O_BomoN4EE12088_complete:A_BomoN4EE_TR30064_c0_g1_i5 406bp	Bomo_Chr9	PREDICTED:_cycle_like_factor_b_isoform_X1_[Bombyx_mori]	GO:0003677 F DNA binding GO:0003700 F DNA-binding transcription factor activity GO:0005634 C nucleus GO:0005667 C transcription regulator complex GO:0005737 C cytoplasm GO:0006351 P transcription, DNA-templated GO:0006355 P regulation of transcription, DNA-templated GO:0016605 C PML body GO:0045893 P positive regulation of transcription, DNA-templated GO:0046983 F protein dimerization activity GO:0048511 P rhythmic process GO:0051775 P response to redox state
2320	O_BomoN4EE12089_complete:A_BomoN4EE_TR30064_c0_g1_i5 260bp	Bomo_Chr9	PREDICTED:_cycle_like_factor_b_isoform_X1_[Bombyx_mori]	GO:0000122 P negative regulation of transcription by RNA polymerase II GO:0000977 F RNA polymerase II transcription regulatory region sequence-specific DNA binding GO:0003053 P circadian regulation of heart rate GO:0003677 F DNA binding GO:0003700 F DNA-binding transcription factor activity GO:0005515 F protein binding GO:0005634 C nucleus GO:0005667 C transcription regulator complex GO:0005737 C cytoplasm GO:0006351 P transcription, DNA-templated GO:0006355 P regulation of transcription, DNA-templated GO:0007622 P rhythmic behavior GO:0007623 P circadian rhythm GO:0008062 P eclosion rhythm GO:0032922 P circadian regulation of gene expression GO:0042594 P response to starvation GO:0045187 P regulation of circadian sleep/wake cycle, sleep GO:0045475 P locomotor rhythm GO:0045893 P positive regulation of transcription, DNA-templated GO:0045944 P positive regulation of transcription by RNA polymerase II GO:0046982 F protein heterodimerization activity GO:0046983 F protein dimerization activity GO:0048148 P behavioral response to cocaine GO:0048511 P rhythmic process
2321	O_BomoN4EE1208_internal:A_BomoN4EE_TR16804_c0_g1_i1 136bp	Bomo_Chr21	PREDICTED:_LOW_QUALITY_PROTEIN:_cytochrome_P450_6B1-like_[Bombyx_mori]	GO:0004497 F monooxygenase activity GO:0005506 F iron ion binding GO:0005783 C endoplasmic reticulum GO:0005789 C endoplasmic reticulum membrane GO:0009055 F electron transfer activity GO:0016020 C membrane GO:0016491 F oxidoreductase activity GO:0016705 F oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen GO:0020037 F heme binding GO:0031090 C organelle membrane GO:0043231 C intracellular membrane-bounded organelle GO:0046680 P response to DDT GO:0046701 P insecticide catabolic process GO:0046872 F metal ion binding GO:0055114 P obsolete oxidation-reduction process
2322	O_BomoN4EE12090_complete:A_BomoN4EE_TR30064_c0_g1_i5 111bp	Bomo_Chr9	hypothetical_protein_ALC57_18566_[Trachymyrmex_cornetzi]
2323	O_BomoN4EE12091_complete:A_BomoN4EE_TR30064_c0_g1_i6 267bp	Bomo_Chr1	PREDICTED:_cycle_like_factor_b_isoform_X2_[Bombyx_mori]	GO:0000122 P negative regulation of transcription by RNA polymerase II GO:0000977 F RNA polymerase II transcription regulatory region sequence-specific DNA binding GO:0003053 P circadian regulation of heart rate GO:0003677 F DNA binding GO:0003700 F DNA-binding transcription factor activity GO:0005515 F protein binding GO:0005634 C nucleus GO:0005667 C transcription regulator complex GO:0005737 C cytoplasm GO:0006351 P transcription, DNA-templated GO:0006355 P regulation of transcription, DNA-templated GO:0007622 P rhythmic behavior GO:0007623 P circadian rhythm GO:0008062 P eclosion rhythm GO:0032922 P circadian regulation of gene expression GO:0042594 P response to starvation GO:0045187 P regulation of circadian sleep/wake cycle, sleep GO:0045475 P locomotor rhythm GO:0045893 P positive regulation of transcription, DNA-templated GO:0045944 P positive regulation of transcription by RNA polymerase II GO:0046982 F protein heterodimerization activity GO:0046983 F protein dimerization activity GO:0048148 P behavioral response to cocaine GO:0048511 P rhythmic process
2324	O_BomoN4EE12092_complete:A_BomoN4EE_TR30064_c0_g1_i7 694bp	Bomo_Chr9	PREDICTED:_cycle_like_factor_b_isoform_X1_[Bombyx_mori]	GO:0003677 F DNA binding GO:0003700 F DNA-binding transcription factor activity GO:0005634 C nucleus GO:0005667 C transcription regulator complex GO:0005737 C cytoplasm GO:0006351 P transcription, DNA-templated GO:0006355 P regulation of transcription, DNA-templated GO:0016605 C PML body GO:0045893 P positive regulation of transcription, DNA-templated GO:0046983 F protein dimerization activity GO:0048511 P rhythmic process GO:0051775 P response to redox state
2325	O_BomoN4EE12093_complete:A_BomoN4EE_TR30064_c0_g1_i7 111bp	Bomo_Chr9	hypothetical_protein_ALC57_18566_[Trachymyrmex_cornetzi]
2326	O_BomoN4EE12094_3prime_partial:A_BomoN4EE_TR30065_c0_g2_i1 212bp	Bomo_Chr6	PREDICTED:_WD_repeat-containing_protein_44_[Bombyx_mori]
2327	O_BomoN4EE12095_complete:A_BomoN4EE_TR30065_c0_g3_i1 659bp	Bomo_Chr6	PREDICTED:_WD_repeat-containing_protein_44_[Bombyx_mori]	GO:0005737 C cytoplasm GO:0005768 C endosome GO:0005794 C Golgi apparatus GO:0005829 C cytosol GO:0010008 C endosome membrane GO:0016020 C membrane GO:0048471 C perinuclear region of cytoplasm
2328	O_BomoN4EE12096_complete:A_BomoN4EE_TR30065_c0_g3_i1 196bp	Bomo_Chr6
2329	O_BomoN4EE12097_complete:A_BomoN4EE_TR30065_c0_g3_i1 119bp	Bomo_Chr6
2330	O_BomoN4EE12098_3prime_partial:A_BomoN4EE_TR30065_c0_g3_i2 678bp	Bomo_Chr6	PREDICTED:_WD_repeat-containing_protein_44_[Bombyx_mori]	GO:0005737 C cytoplasm GO:0005768 C endosome GO:0005794 C Golgi apparatus GO:0005829 C cytosol GO:0010008 C endosome membrane GO:0016020 C membrane GO:0048471 C perinuclear region of cytoplasm
2331	O_BomoN4EE12099_complete:A_BomoN4EE_TR30065_c0_g3_i2 196bp	Bomo_Chr6
2332	O_BomoN4EE1209_internal:A_BomoN4EE_TR16849_c0_g1_i1 104bp	Bomo_Scaf063	unnamed_protein_product_[Macaca_fascicularis]
2333	O_BomoN4EE120_5prime_partial:A_BomoN4EE_TR1927_c0_g1_i1 121bp	Bomo_Chr18	PREDICTED:_uncharacterized_protein_LOC106101629_[Papilio_polytes]
2334	O_BomoN4EE12100_complete:A_BomoN4EE_TR30065_c0_g3_i3 606bp	Bomo_Chr6	PREDICTED:_WD_repeat-containing_protein_44_[Bombyx_mori]	GO:0005737 C cytoplasm GO:0005768 C endosome GO:0005794 C Golgi apparatus GO:0005829 C cytosol GO:0010008 C endosome membrane GO:0016020 C membrane GO:0048471 C perinuclear region of cytoplasm
2335	O_BomoN4EE12101_complete:A_BomoN4EE_TR30065_c0_g3_i3 196bp	Bomo_Chr6
2336	O_BomoN4EE12102_complete:A_BomoN4EE_TR30065_c0_g3_i3 119bp	Bomo_Chr6
2337	O_BomoN4EE12103_3prime_partial:A_BomoN4EE_TR30065_c0_g3_i4 625bp	Bomo_Chr6	PREDICTED:_WD_repeat-containing_protein_44_isoform_X6_[Papilio_xuthus]	GO:0005737 C cytoplasm GO:0005768 C endosome GO:0005794 C Golgi apparatus GO:0005829 C cytosol GO:0010008 C endosome membrane GO:0016020 C membrane GO:0048471 C perinuclear region of cytoplasm
2338	O_BomoN4EE12104_complete:A_BomoN4EE_TR30065_c0_g3_i4 196bp	Bomo_Chr6
2339	O_BomoN4EE12105_complete:A_BomoN4EE_TR30065_c0_g3_i5 532bp	Bomo_Chr6	PREDICTED:_WD_repeat-containing_protein_44_[Bombyx_mori]	GO:0005737 C cytoplasm GO:0005768 C endosome GO:0005794 C Golgi apparatus GO:0005829 C cytosol GO:0005874 C microtubule GO:0010008 C endosome membrane GO:0016020 C membrane GO:0017137 F small GTPase binding GO:0030334 P regulation of cell migration GO:0048471 C perinuclear region of cytoplasm
2340	O_BomoN4EE12106_complete:A_BomoN4EE_TR30065_c0_g3_i5 145bp	Bomo_Chr6