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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
2041 O_BomoN4EE11838_complete:A_BomoN4EE_TR30050_c1_g1_i2
103bp
2042 O_BomoN4EE11839_5prime_partial:A_BomoN4EE_TR30050_c1_g1_i2
101bp
 PREDICTED:_histone-lysine_N-methyltransferase_SETMAR-like_[Bombyx_mori]
GO:0000014 F single-stranded DNA endodeoxyribonuclease activity
GO:0000729 P DNA double-strand break processing
GO:0000737 P DNA catabolic process, endonucleolytic
GO:0000793 C condensed chromosome
GO:0003677 F DNA binding
GO:0003690 F double-stranded DNA binding
GO:0003697 F single-stranded DNA binding
GO:0003824 F catalytic activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0006281 P DNA repair
GO:0006303 P double-strand break repair via nonhomologous end joining
GO:0006974 P cellular response to DNA damage stimulus
GO:0008152 P metabolic process
GO:0008168 F methyltransferase activity
GO:0008270 F zinc ion binding
GO:0008283 P cell population proliferation
GO:0010452 P histone H3-K36 methylation
GO:0015074 P DNA integration
GO:0016568 P chromatin organization
GO:0016740 F transferase activity
GO:0016787 F hydrolase activity
GO:0018024 F histone-lysine N-methyltransferase activity
GO:0031297 P replication fork processing
GO:0032259 P methylation
GO:0034968 P histone lysine methylation
GO:0035861 C site of double-strand break
GO:0042800 F histone methyltransferase activity (H3-K4 specific)
GO:0042803 F protein homodimerization activity
GO:0043566 F DNA binding
GO:0044547 F DNA topoisomerase binding
GO:0044774 P mitotic DNA integrity checkpoint signaling
GO:0046872 F metal ion binding
GO:0046975 F histone methyltransferase activity (H3-K36 specific)
GO:0051568 P histone H3-K4 methylation
GO:0071157 P regulation of cell cycle
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
GO:0097676 P histone H3-K36 dimethylation
GO:2000373 P positive regulation of DNA topoisomerase (ATP-hydrolyzing) activity
GO:2001034 P positive regulation of double-strand break repair via nonhomologous end joining
GO:2001251 P negative regulation of chromosome organization
2043 O_BomoN4EE1183_complete:A_BomoN4EE_TR16347_c0_g1_i1
170bp
 PREDICTED:_zinc_finger_matrin-type_protein_5_[Papilio_xuthus]
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005681 C spliceosomal complex
GO:0005689 C U12-type spliceosomal complex
GO:0006397 P mRNA processing
GO:0008150 P biological_process
GO:0008270 F zinc ion binding
GO:0008380 P RNA splicing
GO:0046872 F metal ion binding
2044 O_BomoN4EE11840_5prime_partial:A_BomoN4EE_TR30050_c1_g1_i4
101bp
 PREDICTED:_histone-lysine_N-methyltransferase_SETMAR-like_[Bombyx_mori]
GO:0000014 F single-stranded DNA endodeoxyribonuclease activity
GO:0000729 P DNA double-strand break processing
GO:0000737 P DNA catabolic process, endonucleolytic
GO:0000793 C condensed chromosome
GO:0003677 F DNA binding
GO:0003690 F double-stranded DNA binding
GO:0003697 F single-stranded DNA binding
GO:0003824 F catalytic activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0006281 P DNA repair
GO:0006303 P double-strand break repair via nonhomologous end joining
GO:0006974 P cellular response to DNA damage stimulus
GO:0008152 P metabolic process
GO:0008168 F methyltransferase activity
GO:0008270 F zinc ion binding
GO:0008283 P cell population proliferation
GO:0010452 P histone H3-K36 methylation
GO:0015074 P DNA integration
GO:0016568 P chromatin organization
GO:0016740 F transferase activity
GO:0016787 F hydrolase activity
GO:0018024 F histone-lysine N-methyltransferase activity
GO:0031297 P replication fork processing
GO:0032259 P methylation
GO:0034968 P histone lysine methylation
GO:0035861 C site of double-strand break
GO:0042800 F histone methyltransferase activity (H3-K4 specific)
GO:0042803 F protein homodimerization activity
GO:0043566 F DNA binding
GO:0044547 F DNA topoisomerase binding
GO:0044774 P mitotic DNA integrity checkpoint signaling
GO:0046872 F metal ion binding
GO:0046975 F histone methyltransferase activity (H3-K36 specific)
GO:0051568 P histone H3-K4 methylation
GO:0071157 P regulation of cell cycle
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
GO:0097676 P histone H3-K36 dimethylation
GO:2000373 P positive regulation of DNA topoisomerase (ATP-hydrolyzing) activity
GO:2001034 P positive regulation of double-strand break repair via nonhomologous end joining
GO:2001251 P negative regulation of chromosome organization
2045 O_BomoN4EE11841_complete:A_BomoN4EE_TR30051_c2_g1_i1
122bp
 ACYPI002031_[Acyrthosiphon_pisum]
GO:0001967 P suckling behavior
GO:0005769 C early endosome
GO:0005770 C late endosome
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0008284 P positive regulation of cell population proliferation
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030176 C integral component of endoplasmic reticulum membrane
GO:0030307 P positive regulation of cell growth
GO:0030433 P ubiquitin-dependent ERAD pathway
GO:0030968 P endoplasmic reticulum unfolded protein response
GO:0030970 P retrograde protein transport, ER to cytosol
GO:1904153 P negative regulation of retrograde protein transport, ER to cytosol
2046 O_BomoN4EE11842_complete:A_BomoN4EE_TR30051_c2_g1_i2
249bp
 putative_Der1-like_domain_family,_member_2_[Danaus_plexippus]
GO:0001967 P suckling behavior
GO:0005769 C early endosome
GO:0005770 C late endosome
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0008284 P positive regulation of cell population proliferation
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030176 C integral component of endoplasmic reticulum membrane
GO:0030307 P positive regulation of cell growth
GO:0030433 P ubiquitin-dependent ERAD pathway
GO:0030968 P endoplasmic reticulum unfolded protein response
GO:0030970 P retrograde protein transport, ER to cytosol
GO:1904153 P negative regulation of retrograde protein transport, ER to cytosol
2047 O_BomoN4EE11843_complete:A_BomoN4EE_TR30051_c2_g1_i2
112bp
2048 O_BomoN4EE11844_3prime_partial:A_BomoN4EE_TR30051_c3_g1_i1
1136bp
 PREDICTED:_calpain-D-like_[Bombyx_mori]
GO:0004198 F calcium-dependent cysteine-type endopeptidase activity
GO:0005622 C intracellular anatomical structure
GO:0005737 C cytoplasm
GO:0006508 P proteolysis
GO:0007275 P multicellular organism development
GO:0007399 P nervous system development
GO:0007601 P visual perception
GO:0008233 F peptidase activity
GO:0008234 F cysteine-type peptidase activity
GO:0008270 F zinc ion binding
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
GO:0050896 P response to stimulus
2049 O_BomoN4EE11845_complete:A_BomoN4EE_TR30051_c3_g1_i1
235bp
2050 O_BomoN4EE11846_complete:A_BomoN4EE_TR30051_c3_g1_i1
127bp
2051 O_BomoN4EE11847_complete:A_BomoN4EE_TR30051_c3_g1_i1
110bp
2052 O_BomoN4EE11848_complete:A_BomoN4EE_TR30051_c3_g1_i1
103bp
2053 O_BomoN4EE11849_complete:A_BomoN4EE_TR30051_c3_g1_i1
101bp
2054 O_BomoN4EE1184_complete:A_BomoN4EE_TR16347_c0_g2_i1
110bp
 Zinc_finger_matrin-type_protein_5_[Papilio_machaon]
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005681 C spliceosomal complex
GO:0005689 C U12-type spliceosomal complex
GO:0006397 P mRNA processing
GO:0008150 P biological_process
GO:0008270 F zinc ion binding
GO:0008380 P RNA splicing
GO:0046872 F metal ion binding
2055 O_BomoN4EE11850_3prime_partial:A_BomoN4EE_TR30051_c3_g2_i1
1138bp
 PREDICTED:_calpain-D-like_[Bombyx_mori]
GO:0004198 F calcium-dependent cysteine-type endopeptidase activity
GO:0005622 C intracellular anatomical structure
GO:0005737 C cytoplasm
GO:0006508 P proteolysis
GO:0007275 P multicellular organism development
GO:0007399 P nervous system development
GO:0007601 P visual perception
GO:0008233 F peptidase activity
GO:0008234 F cysteine-type peptidase activity
GO:0008270 F zinc ion binding
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
GO:0050896 P response to stimulus
2056 O_BomoN4EE11851_complete:A_BomoN4EE_TR30051_c3_g2_i1
235bp
2057 O_BomoN4EE11852_complete:A_BomoN4EE_TR30051_c3_g2_i1
127bp
2058 O_BomoN4EE11853_complete:A_BomoN4EE_TR30051_c3_g2_i1
110bp
2059 O_BomoN4EE11854_complete:A_BomoN4EE_TR30051_c3_g2_i1
103bp
2060 O_BomoN4EE11855_complete:A_BomoN4EE_TR30051_c3_g2_i1
101bp
2061 O_BomoN4EE11856_3prime_partial:A_BomoN4EE_TR30051_c3_g3_i1
992bp
 PREDICTED:_calpain-D-like_[Bombyx_mori]
GO:0004198 F calcium-dependent cysteine-type endopeptidase activity
GO:0005622 C intracellular anatomical structure
GO:0005737 C cytoplasm
GO:0006508 P proteolysis
GO:0007275 P multicellular organism development
GO:0007399 P nervous system development
GO:0007601 P visual perception
GO:0008233 F peptidase activity
GO:0008234 F cysteine-type peptidase activity
GO:0008270 F zinc ion binding
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
GO:0050896 P response to stimulus
2062 O_BomoN4EE11857_complete:A_BomoN4EE_TR30051_c3_g3_i1
235bp
2063 O_BomoN4EE11858_complete:A_BomoN4EE_TR30051_c3_g3_i1
157bp
 PREDICTED:_calpain-D-like_[Bombyx_mori]
GO:0004198 F calcium-dependent cysteine-type endopeptidase activity
GO:0005622 C intracellular anatomical structure
GO:0005737 C cytoplasm
GO:0006508 P proteolysis
GO:0007275 P multicellular organism development
GO:0007399 P nervous system development
GO:0007601 P visual perception
GO:0008233 F peptidase activity
GO:0008234 F cysteine-type peptidase activity
GO:0008270 F zinc ion binding
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
GO:0050896 P response to stimulus
2064 O_BomoN4EE11859_complete:A_BomoN4EE_TR30051_c3_g3_i1
127bp
2065 O_BomoN4EE1185_complete:A_BomoN4EE_TR16350_c0_g1_i1
464bp
 PREDICTED:_Golgi_pH_regulator_[Papilio_xuthus]
GO:0000139 C Golgi membrane
GO:0005244 F voltage-gated ion channel activity
GO:0005794 C Golgi apparatus
GO:0006810 P transport
GO:0006811 P ion transport
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0034765 P regulation of ion transmembrane transport
2066 O_BomoN4EE11860_complete:A_BomoN4EE_TR30051_c3_g3_i1
110bp
2067 O_BomoN4EE11861_complete:A_BomoN4EE_TR30051_c3_g3_i1
103bp
2068 O_BomoN4EE11862_complete:A_BomoN4EE_TR30051_c3_g3_i1
101bp
2069 O_BomoN4EE11863_complete:A_BomoN4EE_TR30051_c5_g2_i1
299bp
 putative_histone-lysine_N-methyltransferase,_H3_lysine-9_specific_[Danaus_plexippus]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000790 C chromatin
GO:0002039 F p53 binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005694 C chromosome
GO:0006275 P regulation of DNA replication
GO:0006306 P DNA methylation
GO:0008168 F methyltransferase activity
GO:0008270 F zinc ion binding
GO:0009267 P cellular response to starvation
GO:0016279 F protein-lysine N-methyltransferase activity
GO:0016568 P chromatin organization
GO:0016571 P histone methylation
GO:0016740 F transferase activity
GO:0018024 F histone-lysine N-methyltransferase activity
GO:0018027 P peptidyl-lysine dimethylation
GO:0032259 P methylation
GO:0034968 P histone lysine methylation
GO:0046872 F metal ion binding
GO:0046974 F histone methyltransferase activity (H3-K9 specific)
GO:0046976 F histone methyltransferase activity (H3-K27 specific)
GO:0051567 P histone H3-K9 methylation
GO:0070734 P histone H3-K27 methylation
GO:0070742 F C2H2 zinc finger domain binding
GO:1901796 P regulation of signal transduction by p53 class mediator
GO:1990841 F promoter-specific chromatin binding
2070 O_BomoN4EE11864_complete:A_BomoN4EE_TR30051_c5_g2_i1
170bp
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