SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

previous next from show/51699
No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
1681 O_BomoN4EE11513_5prime_partial:A_BomoN4EE_TR29522_c0_g1_i2
117bp
1682 O_BomoN4EE11514_complete:A_BomoN4EE_TR29522_c0_g1_i3
238bp
 Uncharacterized_protein_OBRU01_05160_[Operophtera_brumata]
GO:0000166 F nucleotide binding
GO:0004856 F xylulokinase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005975 P carbohydrate metabolic process
GO:0005997 P xylulose metabolic process
GO:0005998 P xylulose catabolic process
GO:0006091 P generation of precursor metabolites and energy
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0016773 F phosphotransferase activity, alcohol group as acceptor
GO:0019640 P glucuronate catabolic process to xylulose 5-phosphate
GO:0042732 P D-xylose metabolic process
GO:0046835 P carbohydrate phosphorylation
GO:0070062 C extracellular exosome
1683 O_BomoN4EE11515_complete:A_BomoN4EE_TR29522_c0_g1_i3
100bp
1684 O_BomoN4EE11516_complete:A_BomoN4EE_TR29522_c0_g1_i4
124bp
 Uncharacterized_protein_OBRU01_05160_[Operophtera_brumata]
GO:0000166 F nucleotide binding
GO:0004856 F xylulokinase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005975 P carbohydrate metabolic process
GO:0005997 P xylulose metabolic process
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0016773 F phosphotransferase activity, alcohol group as acceptor
GO:0042732 P D-xylose metabolic process
GO:0046835 P carbohydrate phosphorylation
GO:0070062 C extracellular exosome
1685 O_BomoN4EE11517_complete:A_BomoN4EE_TR29522_c0_g1_i4
112bp
1686 O_BomoN4EE11518_3prime_partial:A_BomoN4EE_TR29522_c0_g1_i5
122bp
 PREDICTED:_xylulose_kinase_[Papilio_xuthus]
GO:0000166 F nucleotide binding
GO:0004856 F xylulokinase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005975 P carbohydrate metabolic process
GO:0005997 P xylulose metabolic process
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0016773 F phosphotransferase activity, alcohol group as acceptor
GO:0042732 P D-xylose metabolic process
GO:0046835 P carbohydrate phosphorylation
GO:0070062 C extracellular exosome
1687 O_BomoN4EE11519_complete:A_BomoN4EE_TR29522_c0_g1_i5
112bp
1688 O_BomoN4EE1151_complete:A_BomoN4EE_TR16231_c0_g2_i1
287bp
 PREDICTED:_protein_KTI12_homolog_[Plutella_xylostella]
GO:0000166 F nucleotide binding
GO:0005524 F ATP binding
GO:0005575 C cellular_component
GO:0008150 P biological_process
1689 O_BomoN4EE11520_3prime_partial:A_BomoN4EE_TR29522_c0_g1_i6
308bp
 PREDICTED:_xylulose_kinase_isoform_X2_[Amyelois_transitella]
GO:0000166 F nucleotide binding
GO:0004856 F xylulokinase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005975 P carbohydrate metabolic process
GO:0005997 P xylulose metabolic process
GO:0005998 P xylulose catabolic process
GO:0006091 P generation of precursor metabolites and energy
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0016773 F phosphotransferase activity, alcohol group as acceptor
GO:0019640 P glucuronate catabolic process to xylulose 5-phosphate
GO:0042732 P D-xylose metabolic process
GO:0046835 P carbohydrate phosphorylation
GO:0070062 C extracellular exosome
1690 O_BomoN4EE11521_complete:A_BomoN4EE_TR29522_c0_g1_i6
113bp
1691 O_BomoN4EE11522_complete:A_BomoN4EE_TR29522_c0_g1_i6
100bp
1692 O_BomoN4EE11523_complete:A_BomoN4EE_TR29522_c0_g1_i7
113bp
1693 O_BomoN4EE11524_complete:A_BomoN4EE_TR29522_c0_g1_i8
166bp
 Uncharacterized_protein_OBRU01_05160_[Operophtera_brumata]
GO:0000166 F nucleotide binding
GO:0004856 F xylulokinase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005975 P carbohydrate metabolic process
GO:0005997 P xylulose metabolic process
GO:0005998 P xylulose catabolic process
GO:0006091 P generation of precursor metabolites and energy
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0016773 F phosphotransferase activity, alcohol group as acceptor
GO:0019640 P glucuronate catabolic process to xylulose 5-phosphate
GO:0042732 P D-xylose metabolic process
GO:0046835 P carbohydrate phosphorylation
GO:0070062 C extracellular exosome
1694 O_BomoN4EE11525_complete:A_BomoN4EE_TR29522_c0_g1_i8
100bp
1695 O_BomoN4EE11526_complete:A_BomoN4EE_TR29523_c0_g1_i1
1178bp
 PREDICTED:_ATP-dependent_DNA_helicase_Q5-like_[Amyelois_transitella]
GO:0000166 F nucleotide binding
GO:0000724 P double-strand break repair via homologous recombination
GO:0000993 F RNA polymerase II complex binding
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003678 F DNA helicase activity
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005694 C chromosome
GO:0005737 C cytoplasm
GO:0006259 P DNA metabolic process
GO:0006260 P DNA replication
GO:0006281 P DNA repair
GO:0006310 P DNA recombination
GO:0006974 P cellular response to DNA damage stimulus
GO:0007049 P cell cycle
GO:0007067 P mitotic cell cycle
GO:0008026 F helicase activity
GO:0009378 F four-way junction helicase activity
GO:0016591 C RNA polymerase II, holoenzyme
GO:0016787 F hydrolase activity
GO:0032508 P DNA duplex unwinding
GO:0034244 P negative regulation of transcription elongation from RNA polymerase II promoter
GO:0043140 F 3'-5' DNA helicase activity
GO:0051301 P cell division
GO:0051304 P chromosome separation
1696 O_BomoN4EE11527_complete:A_BomoN4EE_TR29523_c0_g1_i1
173bp
1697 O_BomoN4EE11528_complete:A_BomoN4EE_TR29523_c0_g1_i2
542bp
 ATP-dependent_DNA_helicase_Q5_[Papilio_xuthus]
GO:0000166 F nucleotide binding
GO:0000724 P double-strand break repair via homologous recombination
GO:0000993 F RNA polymerase II complex binding
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003678 F DNA helicase activity
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005694 C chromosome
GO:0005737 C cytoplasm
GO:0006259 P DNA metabolic process
GO:0006260 P DNA replication
GO:0006281 P DNA repair
GO:0006310 P DNA recombination
GO:0006974 P cellular response to DNA damage stimulus
GO:0007049 P cell cycle
GO:0007067 P mitotic cell cycle
GO:0008026 F helicase activity
GO:0009378 F four-way junction helicase activity
GO:0016591 C RNA polymerase II, holoenzyme
GO:0016787 F hydrolase activity
GO:0032508 P DNA duplex unwinding
GO:0034244 P negative regulation of transcription elongation from RNA polymerase II promoter
GO:0043140 F 3'-5' DNA helicase activity
GO:0051301 P cell division
GO:0051304 P chromosome separation
1698 O_BomoN4EE11529_complete:A_BomoN4EE_TR29523_c0_g1_i2
207bp
 PREDICTED:_ATP-dependent_DNA_helicase_Q5-like_[Papilio_machaon]
GO:0000166 F nucleotide binding
GO:0000724 P double-strand break repair via homologous recombination
GO:0000993 F RNA polymerase II complex binding
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003678 F DNA helicase activity
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005694 C chromosome
GO:0005737 C cytoplasm
GO:0006260 P DNA replication
GO:0006281 P DNA repair
GO:0006310 P DNA recombination
GO:0006974 P cellular response to DNA damage stimulus
GO:0007049 P cell cycle
GO:0007067 P mitotic cell cycle
GO:0008026 F helicase activity
GO:0009378 F four-way junction helicase activity
GO:0016591 C RNA polymerase II, holoenzyme
GO:0016787 F hydrolase activity
GO:0032508 P DNA duplex unwinding
GO:0034244 P negative regulation of transcription elongation from RNA polymerase II promoter
GO:0043140 F 3'-5' DNA helicase activity
GO:0051301 P cell division
GO:0051304 P chromosome separation
1699 O_BomoN4EE1152_complete:A_BomoN4EE_TR16234_c0_g1_i1
252bp
 PREDICTED:_uncharacterized_protein_LOC106139059_[Amyelois_transitella]
1700 O_BomoN4EE11530_complete:A_BomoN4EE_TR29523_c0_g1_i2
173bp
1701 O_BomoN4EE11531_3prime_partial:A_BomoN4EE_TR29524_c0_g1_i1
131bp
 tRNA_(cytosine(34)-C(5))-methyltransferase_[Papilio_machaon]
1702 O_BomoN4EE11532_complete:A_BomoN4EE_TR29525_c0_g1_i1
281bp
 PREDICTED:_probable_palmitoyltransferase_ZDHHC24_[Plutella_xylostella]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
GO:0008152 P metabolic process
GO:0008270 F zinc ion binding
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016740 F transferase activity
GO:0016746 F acyltransferase activity
GO:0019706 F protein-cysteine S-palmitoyltransferase activity
GO:0046872 F metal ion binding
1703 O_BomoN4EE11533_complete:A_BomoN4EE_TR29525_c0_g1_i1
132bp
 Major_facilitator_superfamily_domain-containing_protein_1_[Papilio_machaon]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0006810 P transport
GO:0008150 P biological_process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0055085 P transmembrane transport
1704 O_BomoN4EE11534_complete:A_BomoN4EE_TR29525_c0_g2_i1
516bp
 PREDICTED:_major_facilitator_superfamily_domain-containing_protein_1-like_isoform_X1_[Amyelois_transitella]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0006810 P transport
GO:0008150 P biological_process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0055085 P transmembrane transport
1705 O_BomoN4EE11535_complete:A_BomoN4EE_TR29525_c0_g2_i1
281bp
 PREDICTED:_probable_palmitoyltransferase_ZDHHC24_[Plutella_xylostella]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
GO:0008152 P metabolic process
GO:0008270 F zinc ion binding
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016740 F transferase activity
GO:0016746 F acyltransferase activity
GO:0019706 F protein-cysteine S-palmitoyltransferase activity
GO:0046872 F metal ion binding
1706 O_BomoN4EE11536_complete:A_BomoN4EE_TR29525_c0_g3_i1
362bp
 PREDICTED:_major_facilitator_superfamily_domain-containing_protein_1-like_isoform_X2_[Amyelois_transitella]
GO:0006810 P transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0055085 P transmembrane transport
1707 O_BomoN4EE11537_complete:A_BomoN4EE_TR29528_c0_g1_i1
260bp
 PREDICTED:_metaxin-2_isoform_X2_[Papilio_machaon]
GO:0005515 F protein binding
GO:0005739 C mitochondrion
GO:0005741 C mitochondrial outer membrane
GO:0006626 P protein targeting to mitochondrion
GO:0006810 P transport
GO:0006839 P mitochondrial transport
GO:0015031 P protein transport
GO:0016020 C membrane
1708 O_BomoN4EE11538_complete:A_BomoN4EE_TR29528_c0_g2_i1
220bp
 PREDICTED:_uncharacterized_protein_LOC106129477_[Amyelois_transitella]
GO:0005515 F protein binding
GO:0005739 C mitochondrion
GO:0005741 C mitochondrial outer membrane
GO:0006626 P protein targeting to mitochondrion
GO:0006810 P transport
GO:0006839 P mitochondrial transport
GO:0015031 P protein transport
GO:0016020 C membrane
1709 O_BomoN4EE11539_complete:A_BomoN4EE_TR29529_c0_g1_i1
352bp
 PREDICTED:_cysteine_and_histidine-rich_protein_1_homolog_isoform_X4_[Amyelois_transitella]
GO:0003674 F molecular_function
GO:0004842 F ubiquitin-protein transferase activity
GO:0005575 C cellular_component
GO:0008150 P biological_process
GO:0008270 F zinc ion binding
GO:0016567 P protein ubiquitination
GO:0046872 F metal ion binding
1710 O_BomoN4EE1153_5prime_partial:A_BomoN4EE_TR16237_c0_g1_i1
274bp
 PREDICTED:_hemolymph_protein_isoform_X1_[Bombyx_mori]
GO:0005576 C extracellular region
previous next from show/51699

- SilkBase 1999-2023 -