Search ORF from Assembled RNA-Seq

No.	Name Length	Chromosome No./Scaffold Id Scaffold Length	BLAST (vs nr)	Gene ontology
1411	O_BomoN4EE11270_5prime_partial:A_BomoN4EE_TR29306_c1_g1_i5 136bp	Bomo_Chr16
1412	O_BomoN4EE11271_5prime_partial:A_BomoN4EE_TR29306_c1_g1_i5 122bp	Bomo_Chr16
1413	O_BomoN4EE11272_complete:A_BomoN4EE_TR29306_c1_g1_i5 119bp	Bomo_Chr16
1414	O_BomoN4EE11273_complete:A_BomoN4EE_TR29306_c1_g1_i5 100bp	Bomo_Chr16
1415	O_BomoN4EE11274_complete:A_BomoN4EE_TR29306_c1_g1_i6 359bp	Bomo_Chr16	PREDICTED:_BRCA1-associated_protein_[Bombyx_mori]	GO:0000151 C ubiquitin ligase complex GO:0000165 P MAPK cascade GO:0000166 F nucleotide binding GO:0004842 F ubiquitin-protein transferase activity GO:0005515 F protein binding GO:0005737 C cytoplasm GO:0007265 P Ras protein signal transduction GO:0008139 F nuclear localization sequence binding GO:0008270 F zinc ion binding GO:0009968 P negative regulation of signal transduction GO:0016567 P protein ubiquitination GO:0016874 F ligase activity GO:0031965 C nuclear membrane GO:0042802 F identical protein binding GO:0043130 F ubiquitin binding GO:0046872 F metal ion binding GO:0061630 F ubiquitin protein ligase activity
1416	O_BomoN4EE11275_5prime_partial:A_BomoN4EE_TR29306_c1_g1_i6 180bp	Bomo_Chr16
1417	O_BomoN4EE11276_5prime_partial:A_BomoN4EE_TR29306_c1_g1_i6 122bp	Bomo_Chr16
1418	O_BomoN4EE11277_complete:A_BomoN4EE_TR29306_c1_g1_i6 119bp	Bomo_Chr16
1419	O_BomoN4EE11278_complete:A_BomoN4EE_TR29306_c1_g1_i6 100bp	Bomo_Chr16
1420	O_BomoN4EE11279_complete:A_BomoN4EE_TR29306_c2_g1_i1 160bp	Bomo_Chr16
1421	O_BomoN4EE1127_5prime_partial:A_BomoN4EE_TR15783_c0_g1_i1 131bp	Bomo_Chr20	PREDICTED:_uncharacterized_protein_LOC105841849_[Bombyx_mori]	GO:0000977 F RNA polymerase II transcription regulatory region sequence-specific DNA binding GO:0003676 F nucleic acid binding GO:0003677 F DNA binding GO:0003700 F DNA-binding transcription factor activity GO:0005634 C nucleus GO:0005737 C cytoplasm GO:0006357 P regulation of transcription by RNA polymerase II GO:0046872 F metal ion binding GO:0046983 F protein dimerization activity
1422	O_BomoN4EE11280_3prime_partial:A_BomoN4EE_TR29307_c0_g1_i1 320bp	Bomo_Chr4	PREDICTED:_protein_phosphatase_PHLPP-like_protein_isoform_X1_[Bombyx_mori]	GO:0003824 F catalytic activity GO:0004721 F phosphoprotein phosphatase activity GO:0004722 F protein serine/threonine phosphatase activity GO:0005515 F protein binding GO:0005575 C cellular_component GO:0006470 P protein dephosphorylation GO:0006915 P apoptotic process GO:0016787 F hydrolase activity GO:0042981 P regulation of apoptotic process GO:0046872 F metal ion binding
1423	O_BomoN4EE11281_5prime_partial:A_BomoN4EE_TR29307_c0_g1_i1 311bp	Bomo_Chr4	PREDICTED:_protein_phosphatase_PHLPP-like_protein_isoform_X1_[Bombyx_mori]	GO:0002667 P regulation of T cell anergy GO:0003824 F catalytic activity GO:0004721 F phosphoprotein phosphatase activity GO:0005634 C nucleus GO:0005737 C cytoplasm GO:0006470 P protein dephosphorylation GO:0006915 P apoptotic process GO:0008152 P metabolic process GO:0009649 P entrainment of circadian clock GO:0016020 C membrane GO:0016787 F hydrolase activity GO:0042981 P regulation of apoptotic process GO:0043408 P regulation of MAPK cascade GO:0046328 P regulation of JNK cascade GO:0046872 F metal ion binding GO:0051898 P negative regulation of protein kinase B signaling GO:1900744 P regulation of p38MAPK cascade
1424	O_BomoN4EE11282_complete:A_BomoN4EE_TR29307_c0_g1_i1 101bp	Bomo_Chr4
1425	O_BomoN4EE11283_5prime_partial:A_BomoN4EE_TR29307_c0_g1_i2 311bp	Bomo_Chr4	PREDICTED:_protein_phosphatase_PHLPP-like_protein_isoform_X1_[Bombyx_mori]	GO:0002667 P regulation of T cell anergy GO:0003824 F catalytic activity GO:0004721 F phosphoprotein phosphatase activity GO:0005634 C nucleus GO:0005737 C cytoplasm GO:0006470 P protein dephosphorylation GO:0006915 P apoptotic process GO:0008152 P metabolic process GO:0009649 P entrainment of circadian clock GO:0016020 C membrane GO:0016787 F hydrolase activity GO:0042981 P regulation of apoptotic process GO:0043408 P regulation of MAPK cascade GO:0046328 P regulation of JNK cascade GO:0046872 F metal ion binding GO:0051898 P negative regulation of protein kinase B signaling GO:1900744 P regulation of p38MAPK cascade
1426	O_BomoN4EE11284_complete:A_BomoN4EE_TR29307_c0_g1_i2 156bp	Bomo_Chr4	PREDICTED:_protein_phosphatase_PHLPP-like_protein_isoform_X2_[Bombyx_mori]	GO:0003723 F RNA binding GO:0004518 F nuclease activity GO:0004527 F exonuclease activity GO:0004535 F poly(A)-specific ribonuclease activity GO:0005634 C nucleus GO:0005737 C cytoplasm GO:0005829 C cytosol GO:0006351 P transcription, DNA-templated GO:0006355 P regulation of transcription, DNA-templated GO:0016787 F hydrolase activity GO:0046872 F metal ion binding GO:0090305 P nucleic acid phosphodiester bond hydrolysis GO:0090503 P RNA phosphodiester bond hydrolysis, exonucleolytic
1427	O_BomoN4EE11285_5prime_partial:A_BomoN4EE_TR29307_c0_g2_i1 639bp	Bomo_Chr4	PREDICTED:_protein_phosphatase_PHLPP-like_protein_isoform_X1_[Bombyx_mori]	GO:0003824 F catalytic activity GO:0004721 F phosphoprotein phosphatase activity GO:0004722 F protein serine/threonine phosphatase activity GO:0005515 F protein binding GO:0005575 C cellular_component GO:0006470 P protein dephosphorylation GO:0006915 P apoptotic process GO:0016787 F hydrolase activity GO:0042981 P regulation of apoptotic process GO:0046872 F metal ion binding
1428	O_BomoN4EE11286_5prime_partial:A_BomoN4EE_TR29307_c1_g1_i1 405bp	Bomo_Chr4	PREDICTED:_LIM/homeobox_protein_Lhx3_isoform_X1_[Bombyx_mori]	GO:0001076 F obsolete transcription factor activity, RNA polymerase II transcription factor binding GO:0003677 F DNA binding GO:0005622 C intracellular anatomical structure GO:0005623 C obsolete cell GO:0005634 C nucleus GO:0005667 C transcription regulator complex GO:0006351 P transcription, DNA-templated GO:0006355 P regulation of transcription, DNA-templated GO:0008045 P motor neuron axon guidance GO:0008270 F zinc ion binding GO:0009953 P dorsal/ventral pattern formation GO:0021520 P spinal cord motor neuron cell fate specification GO:0021521 P ventral spinal cord interneuron specification GO:0021526 P medial motor column neuron differentiation GO:0021527 P spinal cord association neuron differentiation GO:0021983 P pituitary gland development GO:0030154 P cell differentiation GO:0043066 P negative regulation of apoptotic process GO:0043565 F sequence-specific DNA binding GO:0045893 P positive regulation of transcription, DNA-templated GO:0045944 P positive regulation of transcription by RNA polymerase II GO:0046872 F metal ion binding GO:0048839 P inner ear development
1429	O_BomoN4EE11287_5prime_partial:A_BomoN4EE_TR29307_c1_g1_i1 145bp	Bomo_Chr4
1430	O_BomoN4EE11288_complete:A_BomoN4EE_TR29307_c1_g1_i1 114bp	Bomo_Chr4
1431	O_BomoN4EE11289_5prime_partial:A_BomoN4EE_TR29307_c1_g1_i2 400bp	Bomo_Chr4	PREDICTED:_LIM/homeobox_protein_Lhx3_isoform_X3_[Bombyx_mori]	GO:0001076 F obsolete transcription factor activity, RNA polymerase II transcription factor binding GO:0003677 F DNA binding GO:0005622 C intracellular anatomical structure GO:0005623 C obsolete cell GO:0005634 C nucleus GO:0005667 C transcription regulator complex GO:0006351 P transcription, DNA-templated GO:0006355 P regulation of transcription, DNA-templated GO:0008045 P motor neuron axon guidance GO:0008270 F zinc ion binding GO:0009953 P dorsal/ventral pattern formation GO:0021520 P spinal cord motor neuron cell fate specification GO:0021521 P ventral spinal cord interneuron specification GO:0021526 P medial motor column neuron differentiation GO:0021527 P spinal cord association neuron differentiation GO:0021983 P pituitary gland development GO:0030154 P cell differentiation GO:0043066 P negative regulation of apoptotic process GO:0043565 F sequence-specific DNA binding GO:0045893 P positive regulation of transcription, DNA-templated GO:0045944 P positive regulation of transcription by RNA polymerase II GO:0046872 F metal ion binding GO:0048839 P inner ear development
1432	O_BomoN4EE1128_5prime_partial:A_BomoN4EE_TR15825_c0_g1_i1 169bp	Bomo_Chr22	PREDICTED:_cuticular_protein_RR-1_motif_33_isoform_X1_[Bombyx_mori]	GO:0042302 F structural constituent of cuticle
1433	O_BomoN4EE11290_5prime_partial:A_BomoN4EE_TR29307_c1_g1_i2 145bp	Bomo_Chr4
1434	O_BomoN4EE11291_complete:A_BomoN4EE_TR29307_c1_g1_i2 114bp	Bomo_Chr4
1435	O_BomoN4EE11292_complete:A_BomoN4EE_TR29308_c1_g1_i1 440bp	Bomo_Chr5	PREDICTED:_F-box/WD_repeat-containing_protein_9-like_[Amyelois_transitella]
1436	O_BomoN4EE11293_complete:A_BomoN4EE_TR29308_c1_g1_i2 440bp	Bomo_Chr5	PREDICTED:_F-box/WD_repeat-containing_protein_9-like_[Amyelois_transitella]
1437	O_BomoN4EE11294_complete:A_BomoN4EE_TR29309_c0_g1_i1 340bp	Bomo_Chr22	PREDICTED:_uncharacterized_protein_ZK1073.1_[Bombyx_mori]	GO:0005737 C cytoplasm GO:0007165 P signal transduction
1438	O_BomoN4EE11295_5prime_partial:A_BomoN4EE_TR29309_c0_g2_i1 283bp	Bomo_Chr22	PREDICTED:_uncharacterized_protein_ZK1073.1_[Bombyx_mori]	GO:0005737 C cytoplasm GO:0007165 P signal transduction
1439	O_BomoN4EE11296_3prime_partial:A_BomoN4EE_TR29310_c0_g1_i1 289bp	Bomo_Chr27	PREDICTED:_uncharacterized_protein_LOC101737983_isoform_X3_[Bombyx_mori]
1440	O_BomoN4EE11297_3prime_partial:A_BomoN4EE_TR29310_c0_g1_i2 236bp	Bomo_Chr27	PREDICTED:_uncharacterized_protein_LOC101737983_isoform_X4_[Bombyx_mori]