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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
1381 O_BomoN4EE11243_complete:A_BomoN4EE_TR29305_c0_g2_i2
692bp
 PREDICTED:_sphingomyelin_phosphodiesterase_isoform_X1_[Bombyx_mori]
GO:0004767 F sphingomyelin phosphodiesterase activity
GO:0005576 C extracellular region
GO:0005615 C extracellular space
GO:0005764 C lysosome
GO:0005765 C lysosomal membrane
GO:0005768 C endosome
GO:0005886 C plasma membrane
GO:0006685 P sphingomyelin catabolic process
GO:0008152 P metabolic process
GO:0008270 F zinc ion binding
GO:0016787 F hydrolase activity
GO:0016798 F hydrolase activity, acting on glycosyl bonds
GO:0023021 P termination of signal transduction
GO:0035307 P positive regulation of protein dephosphorylation
GO:0043407 P negative regulation of MAP kinase activity
GO:0045121 C membrane raft
GO:0046513 P ceramide biosynthetic process
GO:0046872 F metal ion binding
GO:0061750 F acid sphingomyelin phosphodiesterase activity
GO:0070062 C extracellular exosome
1382 O_BomoN4EE11244_complete:A_BomoN4EE_TR29305_c0_g2_i3
684bp
 PREDICTED:_sphingomyelin_phosphodiesterase_isoform_X1_[Bombyx_mori]
GO:0004767 F sphingomyelin phosphodiesterase activity
GO:0005576 C extracellular region
GO:0005615 C extracellular space
GO:0005764 C lysosome
GO:0005765 C lysosomal membrane
GO:0005768 C endosome
GO:0005886 C plasma membrane
GO:0006685 P sphingomyelin catabolic process
GO:0008152 P metabolic process
GO:0008270 F zinc ion binding
GO:0016787 F hydrolase activity
GO:0016798 F hydrolase activity, acting on glycosyl bonds
GO:0023021 P termination of signal transduction
GO:0035307 P positive regulation of protein dephosphorylation
GO:0043407 P negative regulation of MAP kinase activity
GO:0045121 C membrane raft
GO:0046513 P ceramide biosynthetic process
GO:0046872 F metal ion binding
GO:0061750 F acid sphingomyelin phosphodiesterase activity
GO:0070062 C extracellular exosome
1383 O_BomoN4EE11245_internal:A_BomoN4EE_TR29306_c0_g1_i1
209bp
 hypothetical_protein_KGM_13986_[Danaus_plexippus]
GO:0000146 F microfilament motor activity
GO:0000166 F nucleotide binding
GO:0003774 F cytoskeletal motor activity
GO:0003779 F actin binding
GO:0005516 F calmodulin binding
GO:0005524 F ATP binding
GO:0005546 F phosphatidylinositol-4,5-bisphosphate binding
GO:0005547 F phosphatidylinositol-3,4,5-trisphosphate binding
GO:0005737 C cytoplasm
GO:0005769 C early endosome
GO:0005884 C actin filament
GO:0005886 C plasma membrane
GO:0005903 C brush border
GO:0006892 P post-Golgi vesicle-mediated transport
GO:0007015 P actin filament organization
GO:0008152 P metabolic process
GO:0010008 C endosome membrane
GO:0016459 C myosin complex
GO:0030048 P actin filament-based movement
GO:0030175 C filopodium
GO:0030898 F microfilament motor activity
GO:0032588 C trans-Golgi network membrane
GO:0048471 C perinuclear region of cytoplasm
GO:0051015 F actin filament binding
GO:0051017 P actin filament bundle assembly
GO:0070062 C extracellular exosome
GO:0071944 C cell periphery
1384 O_BomoN4EE11246_internal:A_BomoN4EE_TR29306_c0_g1_i1
208bp
1385 O_BomoN4EE11247_internal:A_BomoN4EE_TR29306_c0_g2_i1
419bp
 hypothetical_protein_KGM_13986_[Danaus_plexippus]
GO:0000146 F microfilament motor activity
GO:0000166 F nucleotide binding
GO:0003774 F cytoskeletal motor activity
GO:0003779 F actin binding
GO:0005516 F calmodulin binding
GO:0005524 F ATP binding
GO:0005546 F phosphatidylinositol-4,5-bisphosphate binding
GO:0005547 F phosphatidylinositol-3,4,5-trisphosphate binding
GO:0005737 C cytoplasm
GO:0005769 C early endosome
GO:0005884 C actin filament
GO:0005886 C plasma membrane
GO:0005903 C brush border
GO:0006892 P post-Golgi vesicle-mediated transport
GO:0007015 P actin filament organization
GO:0008152 P metabolic process
GO:0010008 C endosome membrane
GO:0016459 C myosin complex
GO:0030048 P actin filament-based movement
GO:0030175 C filopodium
GO:0030898 F microfilament motor activity
GO:0032588 C trans-Golgi network membrane
GO:0048471 C perinuclear region of cytoplasm
GO:0051015 F actin filament binding
GO:0051017 P actin filament bundle assembly
GO:0070062 C extracellular exosome
GO:0071944 C cell periphery
1386 O_BomoN4EE11248_3prime_partial:A_BomoN4EE_TR29306_c0_g2_i1
199bp
1387 O_BomoN4EE11249_complete:A_BomoN4EE_TR29306_c0_g2_i1
183bp
1388 O_BomoN4EE1124_complete:A_BomoN4EE_TR15653_c0_g1_i1
109bp
1389 O_BomoN4EE11250_complete:A_BomoN4EE_TR29306_c1_g1_i1
252bp
 PREDICTED:_BRCA1-associated_protein_[Bombyx_mori]
GO:0000151 C ubiquitin ligase complex
GO:0000165 P MAPK cascade
GO:0000166 F nucleotide binding
GO:0004842 F ubiquitin-protein transferase activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0007265 P Ras protein signal transduction
GO:0008139 F nuclear localization sequence binding
GO:0008270 F zinc ion binding
GO:0009968 P negative regulation of signal transduction
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0031965 C nuclear membrane
GO:0042802 F identical protein binding
GO:0043130 F ubiquitin binding
GO:0046872 F metal ion binding
GO:0061630 F ubiquitin protein ligase activity
1390 O_BomoN4EE11251_5prime_partial:A_BomoN4EE_TR29306_c1_g1_i1
180bp
1391 O_BomoN4EE11252_5prime_partial:A_BomoN4EE_TR29306_c1_g1_i1
122bp
1392 O_BomoN4EE11253_complete:A_BomoN4EE_TR29306_c1_g1_i1
119bp
1393 O_BomoN4EE11254_complete:A_BomoN4EE_TR29306_c1_g1_i2
540bp
 PREDICTED:_BRCA1-associated_protein_[Bombyx_mori]
GO:0000151 C ubiquitin ligase complex
GO:0000165 P MAPK cascade
GO:0000166 F nucleotide binding
GO:0004842 F ubiquitin-protein transferase activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0007265 P Ras protein signal transduction
GO:0008139 F nuclear localization sequence binding
GO:0008270 F zinc ion binding
GO:0009968 P negative regulation of signal transduction
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0031965 C nuclear membrane
GO:0042802 F identical protein binding
GO:0043130 F ubiquitin binding
GO:0046872 F metal ion binding
GO:0061630 F ubiquitin protein ligase activity
1394 O_BomoN4EE11255_5prime_partial:A_BomoN4EE_TR29306_c1_g1_i2
180bp
1395 O_BomoN4EE11256_5prime_partial:A_BomoN4EE_TR29306_c1_g1_i2
122bp
1396 O_BomoN4EE11257_complete:A_BomoN4EE_TR29306_c1_g1_i2
119bp
1397 O_BomoN4EE11258_complete:A_BomoN4EE_TR29306_c1_g1_i2
100bp
1398 O_BomoN4EE11259_complete:A_BomoN4EE_TR29306_c1_g1_i3
433bp
 PREDICTED:_BRCA1-associated_protein_[Bombyx_mori]
GO:0000151 C ubiquitin ligase complex
GO:0000165 P MAPK cascade
GO:0000166 F nucleotide binding
GO:0004842 F ubiquitin-protein transferase activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0007265 P Ras protein signal transduction
GO:0008139 F nuclear localization sequence binding
GO:0008270 F zinc ion binding
GO:0009968 P negative regulation of signal transduction
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0031965 C nuclear membrane
GO:0042802 F identical protein binding
GO:0043130 F ubiquitin binding
GO:0046872 F metal ion binding
GO:0061630 F ubiquitin protein ligase activity
1399 O_BomoN4EE1125_internal:A_BomoN4EE_TR15734_c0_g1_i1
175bp
 PREDICTED:_uncharacterized_protein_LOC101745787_[Bombyx_mori]
1400 O_BomoN4EE11260_5prime_partial:A_BomoN4EE_TR29306_c1_g1_i3
180bp
1401 O_BomoN4EE11261_5prime_partial:A_BomoN4EE_TR29306_c1_g1_i3
122bp
1402 O_BomoN4EE11262_complete:A_BomoN4EE_TR29306_c1_g1_i3
119bp
1403 O_BomoN4EE11263_complete:A_BomoN4EE_TR29306_c1_g1_i4
343bp
 PREDICTED:_BRCA1-associated_protein_[Bombyx_mori]
GO:0000151 C ubiquitin ligase complex
GO:0000165 P MAPK cascade
GO:0000166 F nucleotide binding
GO:0004842 F ubiquitin-protein transferase activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0007265 P Ras protein signal transduction
GO:0008139 F nuclear localization sequence binding
GO:0008270 F zinc ion binding
GO:0009968 P negative regulation of signal transduction
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0031965 C nuclear membrane
GO:0042802 F identical protein binding
GO:0043130 F ubiquitin binding
GO:0046872 F metal ion binding
GO:0061630 F ubiquitin protein ligase activity
1404 O_BomoN4EE11264_complete:A_BomoN4EE_TR29306_c1_g1_i4
271bp
1405 O_BomoN4EE11265_5prime_partial:A_BomoN4EE_TR29306_c1_g1_i4
136bp
1406 O_BomoN4EE11266_5prime_partial:A_BomoN4EE_TR29306_c1_g1_i4
122bp
1407 O_BomoN4EE11267_complete:A_BomoN4EE_TR29306_c1_g1_i4
119bp
1408 O_BomoN4EE11268_complete:A_BomoN4EE_TR29306_c1_g1_i5
450bp
 PREDICTED:_BRCA1-associated_protein_[Bombyx_mori]
GO:0000151 C ubiquitin ligase complex
GO:0000165 P MAPK cascade
GO:0000166 F nucleotide binding
GO:0004842 F ubiquitin-protein transferase activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0007265 P Ras protein signal transduction
GO:0008139 F nuclear localization sequence binding
GO:0008270 F zinc ion binding
GO:0009968 P negative regulation of signal transduction
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0031965 C nuclear membrane
GO:0042802 F identical protein binding
GO:0043130 F ubiquitin binding
GO:0046872 F metal ion binding
GO:0061630 F ubiquitin protein ligase activity
1409 O_BomoN4EE11269_complete:A_BomoN4EE_TR29306_c1_g1_i5
271bp
1410 O_BomoN4EE1126_5prime_partial:A_BomoN4EE_TR15734_c0_g1_i1
132bp
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