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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
9961 O_BomoMG2732_5prime_partial:A_BomoMG_comp22271_c0_seq1
117bp
 PREDICTED:_cytoplasmic_polyadenylation_element-binding_protein_1_[Amyelois_transitella]
GO:0000166 F nucleotide binding
GO:0000900 F translation repressor activity, mRNA regulatory element binding
GO:0000922 C spindle pole
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005815 C microtubule organizing center
GO:0005856 C cytoskeleton
GO:0006397 P mRNA processing
GO:0006417 P regulation of translation
GO:0016020 C membrane
GO:0030529 C ribonucleoprotein complex
GO:0032869 P cellular response to insulin stimulus
GO:0035925 F mRNA 3'-UTR AU-rich region binding
GO:0043234 C protein-containing complex
GO:0046872 F metal ion binding
GO:0071230 P cellular response to amino acid stimulus
GO:0071456 P cellular response to hypoxia
GO:2000766 P negative regulation of cytoplasmic translation
9962 O_BomoMG27330_complete:A_BomoMG_comp53206_c0_seq1
165bp
GO:0003674 F molecular_function
GO:0005634 C nucleus
GO:0005783 C endoplasmic reticulum
GO:0007030 P Golgi organization
GO:0031965 C nuclear membrane
9963 O_BomoMG27331_complete:A_BomoMG_comp53219_c0_seq1
206bp
GO:0000502 C proteasome complex
GO:0004175 F endopeptidase activity
GO:0004298 F threonine-type endopeptidase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005839 C proteasome core complex
GO:0006508 P proteolysis
GO:0006974 P cellular response to DNA damage stimulus
GO:0008233 F peptidase activity
GO:0016787 F hydrolase activity
GO:0022008 P neurogenesis
GO:0043161 P proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0051603 P proteolysis involved in cellular protein catabolic process
9964 O_BomoMG27332_internal:A_BomoMG_comp53249_c0_seq1
123bp
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0007275 P multicellular organism development
GO:0014706 P striated muscle tissue development
GO:0030154 P cell differentiation
GO:0030517 P negative regulation of axon extension
GO:0042692 P muscle cell differentiation
GO:0043403 P skeletal muscle tissue regeneration
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0048671 P negative regulation of collateral sprouting
GO:0051091 P positive regulation of DNA-binding transcription factor activity
GO:0061629 F RNA polymerase II-specific DNA-binding transcription factor binding
9965 O_BomoMG27334_5prime_partial:A_BomoMG_comp53327_c0_seq1
305bp
GO:0004252 F serine-type endopeptidase activity
GO:0005576 C extracellular region
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0008236 F serine-type peptidase activity
GO:0016787 F hydrolase activity
GO:0030574 P collagen catabolic process
9966 O_BomoMG27335_internal:A_BomoMG_comp53379_c0_seq1
708bp
GO:0000226 P microtubule cytoskeleton organization
GO:0003779 F actin binding
GO:0005178 F integrin binding
GO:0005509 F calcium ion binding
GO:0005515 F protein binding
GO:0005604 C basement membrane
GO:0005634 C nucleus
GO:0005635 C nuclear envelope
GO:0005737 C cytoplasm
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0005874 C microtubule
GO:0005882 C intermediate filament
GO:0005886 C plasma membrane
GO:0005925 C focal adhesion
GO:0005938 C cell cortex
GO:0007010 P cytoskeleton organization
GO:0007050 P regulation of cell cycle
GO:0007155 P cell adhesion
GO:0007229 P integrin-mediated signaling pathway
GO:0008022 F protein C-terminus binding
GO:0008092 F cytoskeletal protein binding
GO:0009611 P response to wounding
GO:0009925 C basal plasma membrane
GO:0015629 C actin cytoskeleton
GO:0015630 C microtubule cytoskeleton
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016023 C cytoplasmic vesicle
GO:0030011 P maintenance of cell polarity
GO:0030018 C Z disc
GO:0030054 C cell junction
GO:0030056 C hemidesmosome
GO:0030424 C axon
GO:0031252 C cell leading edge
GO:0031581 P hemidesmosome assembly
GO:0031673 C H zone
GO:0035371 C microtubule plus-end
GO:0042803 F protein homodimerization activity
GO:0042995 C cell projection
GO:0045104 P intermediate filament cytoskeleton organization
GO:0045111 C intermediate filament cytoskeleton
GO:0046872 F metal ion binding
GO:0048870 P cell motility
GO:0051010 F microtubule plus-end binding
GO:0070062 C extracellular exosome
9967 O_BomoMG2733_5prime_partial:A_BomoMG_comp22272_c0_seq1
118bp
 PREDICTED:_INO80_complex_subunit_C_[Amyelois_transitella]
GO:0003674 F molecular_function
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0006281 P DNA repair
GO:0006310 P DNA recombination
GO:0006338 P chromatin remodeling
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006974 P cellular response to DNA damage stimulus
GO:0031011 C Ino80 complex
GO:0071339 C MLL1 complex
9968 O_BomoMG27340_5prime_partial:A_BomoMG_comp53443_c0_seq1
146bp
9969 O_BomoMG27342_3prime_partial:A_BomoMG_comp53444_c0_seq1
258bp
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0006909 P phagocytosis
GO:0006952 P defense response
GO:0006955 P immune response
GO:0006967 P positive regulation of antifungal peptide biosynthetic process
GO:0006974 P cellular response to DNA damage stimulus
GO:0007275 P multicellular organism development
GO:0007399 P nervous system development
GO:0008063 P Toll signaling pathway
GO:0008134 F transcription factor binding
GO:0009620 P response to fungus
GO:0009950 P dorsal/ventral axis specification
GO:0019730 P antimicrobial humoral response
GO:0019732 P antifungal humoral response
GO:0030097 P hemopoiesis
GO:0031594 C neuromuscular junction
GO:0042308 P negative regulation of protein import into nucleus
GO:0042994 P cytoplasmic sequestering of transcription factor
GO:0045087 P innate immune response
GO:0046843 P dorsal appendage formation
GO:0048477 P oogenesis
9970 O_BomoMG27343_complete:A_BomoMG_comp53457_c0_seq1
111bp
GO:0003735 F structural constituent of ribosome
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0005747 C mitochondrial respiratory chain complex I
GO:0005761 C mitochondrial ribosome
GO:0008137 F NADH dehydrogenase (ubiquinone) activity
GO:0016020 C membrane
GO:0032543 P mitochondrial translation
GO:0042773 P ATP synthesis coupled electron transport
GO:0055114 P obsolete oxidation-reduction process
GO:0070469 C respirasome
9971 O_BomoMG27344_complete:A_BomoMG_comp53506_c0_seq1
527bp
GO:0003840 F obsolete gamma-glutamyltransferase activity
GO:0006508 P proteolysis
GO:0006749 P glutathione metabolic process
GO:0008233 F peptidase activity
GO:0016740 F transferase activity
GO:0016746 F acyltransferase activity
GO:0016787 F hydrolase activity
GO:0036374 F glutathione hydrolase activity
9972 O_BomoMG27345_internal:A_BomoMG_comp53542_c0_seq1
617bp
GO:0005576 C extracellular region
GO:0005737 C cytoplasm
GO:0005815 C microtubule organizing center
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0006810 P transport
GO:0006915 P apoptotic process
GO:0007049 P cell cycle
GO:0015031 P protein transport
GO:0017124 F SH3 domain binding
GO:0042470 C melanosome
GO:0051301 P cell division
GO:0070062 C extracellular exosome
9973 O_BomoMG27348_complete:A_BomoMG_comp53615_c0_seq1
466bp
GO:0000028 P ribosomal small subunit assembly
GO:0000462 P maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0030515 F snoRNA binding
GO:0032040 C small-subunit processome
GO:0034388 C Pwp2p-containing subcomplex of 90S preribosome
9974 O_BomoMG27351_complete:A_BomoMG_comp53678_c0_seq1
645bp
GO:0001942 P hair follicle development
GO:0004871 F obsolete signal transducer activity
GO:0004888 F transmembrane signaling receptor activity
GO:0004930 F G protein-coupled receptor activity
GO:0005794 C Golgi apparatus
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0007165 P signal transduction
GO:0007186 P G protein-coupled receptor signaling pathway
GO:0009994 P oocyte differentiation
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0032588 C trans-Golgi network membrane
GO:0042127 P regulation of cell population proliferation
GO:0048839 P inner ear development
GO:0090263 P positive regulation of canonical Wnt signaling pathway
GO:2001013 P epithelial cell proliferation involved in renal tubule morphogenesis
9975 O_BomoMG27354_complete:A_BomoMG_comp53705_c0_seq1
240bp
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000165 P MAPK cascade
GO:0000790 C chromatin
GO:0000978 F RNA polymerase II cis-regulatory region sequence-specific DNA binding
GO:0000981 F DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0001736 P establishment of planar polarity
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0003713 F transcription coactivator activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005667 C transcription regulator complex
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0006909 P phagocytosis
GO:0007254 P JNK cascade
GO:0007391 P dorsal closure
GO:0007464 P R3/R4 cell fate commitment
GO:0007465 P R7 cell fate commitment
GO:0008134 F transcription factor binding
GO:0008348 P negative regulation of antimicrobial humoral response
GO:0009314 P response to radiation
GO:0009612 P response to mechanical stimulus
GO:0010259 P multicellular organism aging
GO:0010941 P regulation of cell death
GO:0032496 P response to lipopolysaccharide
GO:0032870 P cellular response to hormone stimulus
GO:0034097 P response to cytokine
GO:0042060 P wound healing
GO:0042127 P regulation of cell population proliferation
GO:0042493 P response to xenobiotic stimulus
GO:0043565 F sequence-specific DNA binding
GO:0045597 P positive regulation of cell differentiation
GO:0045823 P positive regulation of heart contraction
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046529 P imaginal disc fusion, thorax closure
GO:0046843 P dorsal appendage formation
GO:0046844 P chorion micropyle formation
GO:0046982 F protein heterodimerization activity
GO:0051124 P synaptic assembly at neuromuscular junction
GO:0051591 P response to cAMP
GO:0051726 P regulation of cell cycle
9976 O_BomoMG27355_5prime_partial:A_BomoMG_comp53758_c0_seq1
349bp
9977 O_BomoMG27357_5prime_partial:A_BomoMG_comp53787_c0_seq1
217bp
GO:0000920 P septum digestion after cytokinesis
GO:0001772 C immunological synapse
GO:0005515 F protein binding
GO:0005576 C extracellular region
GO:0005737 C cytoplasm
GO:0005815 C microtubule organizing center
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0005925 C focal adhesion
GO:0006810 P transport
GO:0006915 P apoptotic process
GO:0006997 P nucleus organization
GO:0007049 P cell cycle
GO:0007080 P mitotic metaphase plate congression
GO:0010824 P regulation of centrosome duplication
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016032 P viral process
GO:0019058 P viral life cycle
GO:0031871 F proteinase activated receptor binding
GO:0036258 P multivesicular body assembly
GO:0039702 P viral budding via host ESCRT complex
GO:0042470 C melanosome
GO:0042803 F protein homodimerization activity
GO:0043209 C myelin sheath
GO:0046983 F protein dimerization activity
GO:0048306 F calcium-dependent protein binding
GO:0051301 P cell division
GO:0070062 C extracellular exosome
GO:0070971 C endoplasmic reticulum exit site
GO:0090611 P ubiquitin-independent protein catabolic process via the multivesicular body sorting pathway
GO:1901673 P regulation of mitotic spindle assembly
GO:1903543 P positive regulation of exosomal secretion
GO:1903551 P regulation of extracellular exosome assembly
GO:1903553 P positive regulation of extracellular exosome assembly
GO:1903561 C extracellular vesicle
9978 O_BomoMG2735_5prime_partial:A_BomoMG_comp22276_c0_seq1
441bp
 PREDICTED:_3-oxoacyl-[acyl-carrier-protein]_synthase,_mitochondrial_isoform_X2_[Bombyx_mori]
GO:0003824 F catalytic activity
GO:0004315 F 3-oxoacyl-[acyl-carrier-protein] synthase activity
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0006629 P lipid metabolic process
GO:0006631 P fatty acid metabolic process
GO:0006633 P fatty acid biosynthetic process
GO:0006637 P acyl-CoA metabolic process
GO:0008152 P metabolic process
GO:0016740 F transferase activity
GO:0016746 F acyltransferase activity
GO:0016747 F acyltransferase activity, transferring groups other than amino-acyl groups
GO:0051790 P short-chain fatty acid biosynthetic process
GO:0051792 P medium-chain fatty acid biosynthetic process
9979 O_BomoMG27360_3prime_partial:A_BomoMG_comp53847_c0_seq1
191bp
GO:0005737 C cytoplasm
9980 O_BomoMG27362_complete:A_BomoMG_comp53851_c0_seq1
145bp
9981 O_BomoMG27363_5prime_partial:A_BomoMG_comp53851_c1_seq1
415bp
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0006810 P transport
GO:0008150 P biological_process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0055085 P transmembrane transport
9982 O_BomoMG27364_5prime_partial:A_BomoMG_comp53871_c0_seq1
268bp
GO:0005576 C extracellular region
GO:0005615 C extracellular space
9983 O_BomoMG27365_complete:A_BomoMG_comp53907_c0_seq1
397bp
GO:0000166 F nucleotide binding
GO:0000502 C proteasome complex
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0008540 C proteasome regulatory particle, base subcomplex
GO:0016020 C membrane
GO:0016234 C inclusion body
GO:0016787 F hydrolase activity
GO:0017025 F TBP-class protein binding
GO:0022624 C proteasome accessory complex
GO:0030163 P protein catabolic process
GO:0030433 P ubiquitin-dependent ERAD pathway
GO:0031595 C nuclear proteasome complex
GO:0031597 C cytosolic proteasome complex
GO:0036402 F proteasome-activating activity
GO:0045899 P positive regulation of RNA polymerase II transcription preinitiation complex assembly
GO:0070062 C extracellular exosome
GO:0090261 P positive regulation of inclusion body assembly
GO:1901800 P positive regulation of proteasomal protein catabolic process
9984 O_BomoMG27367_complete:A_BomoMG_comp53985_c0_seq1
469bp
GO:0004579 F dolichyl-diphosphooligosaccharide-protein glycotransferase activity
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0006486 P protein glycosylation
GO:0008250 C oligosaccharyltransferase complex
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016740 F transferase activity
GO:0016757 F glycosyltransferase activity
GO:0018279 P protein N-linked glycosylation via asparagine
GO:0042470 C melanosome
9985 O_BomoMG27368_complete:A_BomoMG_comp54026_c0_seq1
558bp
GO:0000166 F nucleotide binding
GO:0004485 F methylcrotonoyl-CoA carboxylase activity
GO:0005524 F ATP binding
GO:0005575 C cellular_component
GO:0005739 C mitochondrion
GO:0005759 C mitochondrial matrix
GO:0006551 P leucine metabolic process
GO:0006552 P leucine catabolic process
GO:0007563 P regulation of eclosion
GO:0016421 F CoA carboxylase activity
GO:0016874 F ligase activity
9986 O_BomoMG27369_5prime_partial:A_BomoMG_comp54035_c0_seq1
555bp
GO:0000166 F nucleotide binding
GO:0005524 F ATP binding
GO:0005576 C extracellular region
GO:0009166 P nucleotide catabolic process
GO:0016787 F hydrolase activity
GO:0016788 F hydrolase activity, acting on ester bonds
GO:0046872 F metal ion binding
9987 O_BomoMG27370_5prime_partial:A_BomoMG_comp54098_c0_seq1
314bp
GO:0004745 F NAD-retinol dehydrogenase activity
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016491 F oxidoreductase activity
GO:0042572 P retinol metabolic process
GO:0042574 P retinal metabolic process
GO:0043616 P keratinocyte proliferation
GO:0050908 P detection of light stimulus involved in visual perception
GO:0055114 P obsolete oxidation-reduction process
9988 O_BomoMG27371_5prime_partial:A_BomoMG_comp54184_c0_seq1
386bp
9989 O_BomoMG27373_complete:A_BomoMG_comp54264_c0_seq1
273bp
9990 O_BomoMG27375_5prime_partial:A_BomoMG_comp54284_c0_seq1
625bp
GO:0005576 C extracellular region
GO:0016491 F oxidoreductase activity
GO:0016614 F oxidoreductase activity, acting on CH-OH group of donors
GO:0050660 F flavin adenine dinucleotide binding
GO:0055114 P obsolete oxidation-reduction process
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